3BYLA

Crystal structure of b. subtilis levansucrase mutant e342a
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
440
structure length
440
Chain Sequence
b'QKPYKETYGISHITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDEIARANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSVVKDSILEQGQLTVNK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Levansucrase
publication title Donor substrate recognition in the raffinose-bound E342A mutant of fructosyltransferase Bacillus subtilis levansucrase
rcsb
source organism Bacillus subtilis
molecule tags Transferase
total genus 138
structure length 440
sequence length 440
ec nomenclature ec 2.4.1.10: Levansucrase.
pdb deposition date 2008-01-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02435 Glyco_hydro_68 Levansucrase/Invertase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 3bylA01
5AYDA 3BYKA 5JOZA 5B6SA 3D60A 4O8PA 5FK8A 4N4BA 3KF3A 4U6BA 5GLLA 4KMIA 3QC2A 1WL7A 1PT2A 3WN2A 1YIFA 3U75A 3BYLA 2AEZA 3C7OA 3P2NA 3VSFA 2EXIA 3AKIA 4ONZA 1GYHA 1GYEB 3D5ZA 4KCBA 2EXKA 3C7HA 3D61A 3WMZA 2XQRA 3D5YA 3LDRA 1Y7BA 3SC7X 3WN0A 3OM2A 3LV4A 2X8SA 4EQVA 1Y9MA 4FFFA 3QEEA 5JOWA 5ANNA 5FKCA 4AK7A 3WPVA 2B4WA 4D47A 3WPYA 3PIJA 3AKGA 3K1UA 4UDJA 3AKHA 3BYNA 5A8CA 1UYPA 2YFRA 3WPUA 2AEYA 2OXBA 4PVIA 5FMCA 5A7VB 5FIXA 3C2UA 2QQWA 5FKBA 3C7FA 5GLMA 1UV4A 4N2RA 3ZXJA 1VKDA 3NQHA 4UDKA 2QQVA 3C7EA 4NOVA 5B6TA 4UDIA 3LDKA 3PIGA 4FFHA 1Y4WA 2QQUA 2EXHA 3LIGA 3VT2A 3WPZA 4FFGA 3WN1A 5GLQA 4U6DA 3OM7A 3VSZA 4O8OA 3UGHA 4UDGA 3R4ZA 4MLGA 4N1IA 3LFIA 4PVAA 3VT1A 3UGFA 3AKFA 5A7VA 3ZXLA 4O8NA 3VSRA 2AC1A 3OM6A 4AK6A 3WAUA 1GYDB 1YI7A 3VSSA 3LEMA 1OYGA 3KF5A 3QEDA 3ZXKA 2X8TA 3R4YA 4QQSA 5GLRA 5C0PA 4FFIA 3OM5A 5GLKA 5GLPA 4UDKE 2YFSA 3TAWA 1YRZA 2ADDA 2ADEA 3R67A 2VDTA 5FK7A 3VT0A 5A8DA 3C7GA 4KC8A 1W18A 3RWKX 3CU9A 2EXJA 4N2ZA 5GLOA 3WASA 4KC7A 4KCAA 5JOYA 5GLNA 5FLWA 2X8FA 5FMDA 4COTA 5AY9A 3BYJA 3KSTA 5AYCA 3OM4A 3LIHA 5FMBA 3QZ4A 3WMYA 3LF7A 4AK5A 1W2TA 1ST8A 3QEFA 5AYEA 2YFTA 3WATA 3U14A 1Y9GA 3UGGA 5JOXA
chains in the Genus database with same CATH superfamily
5AYDA 3BYKA 5JOZA 5B6SA 3D60A 4O8PA 5FK8A 4N4BA 3KF3A 4U6BA 5GLLA 4KMIA 3QC2A 1WL7A 1PT2A 3WN2A 1YIFA 3U75A 3BYLA 2AEZA 3C7OA 3P2NA 3VSFA 2EXIA 3AKIA 4ONZA 1GYHA 1GYEB 3D5ZA 4KCBA 2EXKA 3C7HA 3D61A 3WMZA 2XQRA 3D5YA 3LDRA 1Y7BA 3SC7X 3WN0A 3OM2A 3LV4A 2X8SA 4EQVA 1Y9MA 4FFFA 3QEEA 5JOWA 5ANNA 1TL2A 5FKCA 4AK7A 3WPVA 2B4WA 4D47A 3WPYA 3PIJA 3AKGA 3K1UA 4UDJA 3AKHA 3BYNA 5C2MA 5A8CA 1UYPA 2YFRA 3WPUA 2AEYA 2OXBA 4PVIA 5FMCA 5A7VB 5FIXA 3C2UA 2QQWA 5FKBA 3C7FA 5GLMA 1UV4A 4N2RA 3ZXJA 1VKDA 3NQHA 4UDKA 2QQVA 3C7EA 4NOVA 5B6TA 4UDIA 3LDKA 3PIGA 4FFHA 1Y4WA 2QQUA 2EXHA 3LIGA 3VT2A 3WPZA 4FFGA 3WN1A 5GLQA 4U6DA 3OM7A 3VSZA 4O8OA 3UGHA 4UDGA 3R4ZA 4MLGA 4N1IA 3LFIA 4PVAA 3VT1A 3UGFA 3AKFA 5A7VA 3ZXLA 4O8NA 3VSRA 2AC1A 3OM6A 4AK6A 3WAUA 1GYDB 1YI7A 3VSSA 3LEMA 1OYGA 3KF5A 3QEDA 3ZXKA 2X8TA 3R4YA 4QQSA 5GLRA 5C0PA 4FFIA 3OM5A 5GLKA 5GLPA 4UDKE 2YFSA 3TAWA 1YRZA 2ADDA 2ADEA 3R67A 2VDTA 5FK7A 3VT0A 5A8DA 3C7GA 4KC8A 1W18A 3RWKX 3CU9A 2EXJA 4N2ZA 5GLOA 3WASA 4KC7A 4KCAA 5JOYA 5GLNA 5FLWA 2X8FA 5FMDA 4COTA 5AY9A 3BYJA 3KSTA 5AYCA 3OM4A 3LIHA 5FMBA 3QZ4A 3WMYA 3LF7A 4AK5A 1W2TA 1ST8A 3QEFA 5AYEA 2YFTA 3WATA 3U14A 1Y9GA 3UGGA 5JOXA
chains in the Genus database with same CATH topology
5AYDA 3BYKA 5JOZA 5B6SA 3D60A 4O8PA 5FK8A 4N4BA 3KF3A 4U6BA 5GLLA 4KMIA 3QC2A 1WL7A 1PT2A 3WN2A 1YIFA 3U75A 3BYLA 2AEZA 3C7OA 3P2NA 3VSFA 2EXIA 3AKIA 4ONZA 1GYHA 1GYEB 3D5ZA 4KCBA 2EXKA 3C7HA 3D61A 3WMZA 2XQRA 3D5YA 3LDRA 1Y7BA 3SC7X 3WN0A 3OM2A 3LV4A 2X8SA 4EQVA 1Y9MA 4FFFA 3QEEA 5JOWA 5ANNA 5FKCA 4AK7A 3WPVA 2B4WA 4D47A 3WPYA 3PIJA 3AKGA 3K1UA 4UDJA 3AKHA 3BYNA 5A8CA 1UYPA 2YFRA 3WPUA 2AEYA 2OXBA 4PVIA 5FMCA 5A7VB 5FIXA 3C2UA 2QQWA 5FKBA 3C7FA 5GLMA 1UV4A 4N2RA 3ZXJA 1VKDA 3NQHA 4UDKA 2QQVA 3C7EA 4NOVA 5B6TA 4UDIA 3LDKA 3PIGA 4FFHA 1Y4WA 2QQUA 2EXHA 3LIGA 3VT2A 3WPZA 4FFGA 3WN1A 5GLQA 4U6DA 3OM7A 3VSZA 4O8OA 3UGHA 4UDGA 3R4ZA 4MLGA 4N1IA 3LFIA 4PVAA 3VT1A 3UGFA 3AKFA 5A7VA 3ZXLA 4O8NA 3VSRA 2AC1A 3OM6A 4AK6A 3WAUA 1GYDB 1YI7A 3VSSA 3LEMA 1OYGA 3KF5A 3QEDA 3ZXKA 2X8TA 3R4YA 4QQSA 5GLRA 5C0PA 4FFIA 3OM5A 5GLKA 5GLPA 4UDKE 2YFSA 3TAWA 1YRZA 2ADDA 2ADEA 3R67A 2VDTA 5FK7A 3VT0A 5A8DA 3C7GA 4KC8A 1W18A 3RWKX 3CU9A 2EXJA 4N2ZA 5GLOA 3WASA 4KC7A 4KCAA 5JOYA 5GLNA 5FLWA 2X8FA 5FMDA 4COTA 5AY9A 3BYJA 3KSTA 5AYCA 3OM4A 3LIHA 5FMBA 3QZ4A 3WMYA 3LF7A 4AK5A 1W2TA 1ST8A 3QEFA 5AYEA 2YFTA 3WATA 3U14A 1Y9GA 3UGGA 5JOXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5AYD A;  3BYK A;  5JOZ A;  5B6S A;  3D60 A;  4O8P A;  5FK8 A;  4N4B A;  3KF3 A;  4U6B A;  5GLL A;  4KMI A;  3QC2 A;  1WL7 A;  1PT2 A;  3WN2 A;  1YIF A;  3U75 A;  3BYL A;  2AEZ A;  3C7O A;  3P2N A;  3VSF A;  2EXI A;  3AKI A;  4ONZ A;  1GYH A;  1GYE B;  3D5Z A;  4KCB A;  2EXK A;  3C7H A;  3D61 A;  3WMZ A;  2XQR A;  3D5Y A;  3LDR A;  1Y7B A;  3SC7 X;  3WN0 A;  3OM2 A;  3LV4 A;  2X8S A;  4EQV A;  1Y9M A;  4FFF A;  3QEE A;  5JOW A;  5ANN A;  5FKC A;  4AK7 A;  3WPV A;  2B4W A;  4D47 A;  3WPY A;  3PIJ A;  3AKG A;  3K1U A;  4UDJ A;  3AKH A;  3BYN A;  5A8C A;  1UYP A;  2YFR A;  3WPU A;  2AEY A;  2OXB A;  4PVI A;  5FMC A;  5A7V B;  5FIX A;  3C2U A;  2QQW A;  5FKB A;  3C7F A;  5GLM A;  1UV4 A;  4N2R A;  3ZXJ A;  1VKD A;  3NQH A;  4UDK A;  2QQV A;  3C7E A;  4NOV A;  5B6T A;  4UDI A;  3LDK A;  3PIG A;  4FFH A;  1Y4W A;  2QQU A;  2EXH A;  3LIG A;  3VT2 A;  3WPZ A;  4FFG A;  3WN1 A;  5GLQ A;  4U6D A;  3OM7 A;  3VSZ A;  4O8O A;  3UGH A;  4UDG A;  3R4Z A;  4MLG A;  4N1I A;  3LFI A;  4PVA A;  3VT1 A;  3UGF A;  3AKF A;  5A7V A;  3ZXL A;  4O8N A;  3VSR A;  2AC1 A;  3OM6 A;  4AK6 A;  3WAU A;  1GYD B;  1YI7 A;  3VSS A;  3LEM A;  1OYG A;  3KF5 A;  3QED A;  3ZXK A;  2X8T A;  3R4Y A;  4QQS A;  5GLR A;  5C0P A;  4FFI A;  3OM5 A;  5GLK A;  5GLP A;  4UDK E;  2YFS A;  3TAW A;  1YRZ A;  2ADD A;  2ADE A;  3R67 A;  2VDT A;  5FK7 A;  3VT0 A;  5A8D A;  3C7G A;  4KC8 A;  1W18 A;  3RWK X;  3CU9 A;  2EXJ A;  4N2Z A;  5GLO A;  3WAS A;  4KC7 A;  4KCA A;  5JOY A;  5GLN A;  5FLW A;  2X8F A;  5FMD A;  4COT A;  5AY9 A;  3BYJ A;  3KST A;  5AYC A;  3OM4 A;  3LIH A;  5FMB A;  3QZ4 A;  3WMY A;  3LF7 A;  4AK5 A;  1W2T A;  1ST8 A;  3QEF A;  5AYE A;  2YFT A;  3WAT A;  3U14 A;  1Y9G A;  3UGG A;  5JOX A; 
#chains in the Genus database with same CATH topology
 5AYD A;  3BYK A;  5JOZ A;  5B6S A;  3D60 A;  4O8P A;  5FK8 A;  4N4B A;  3KF3 A;  4U6B A;  5GLL A;  4KMI A;  3QC2 A;  1WL7 A;  1PT2 A;  3WN2 A;  1YIF A;  3U75 A;  3BYL A;  2AEZ A;  3C7O A;  3P2N A;  3VSF A;  2EXI A;  3AKI A;  4ONZ A;  1GYH A;  1GYE B;  3D5Z A;  4KCB A;  2EXK A;  3C7H A;  3D61 A;  3WMZ A;  2XQR A;  3D5Y A;  3LDR A;  1Y7B A;  3SC7 X;  3WN0 A;  3OM2 A;  3LV4 A;  2X8S A;  4EQV A;  1Y9M A;  4FFF A;  3QEE A;  5JOW A;  5ANN A;  1TL2 A;  5FKC A;  4AK7 A;  3WPV A;  2B4W A;  4D47 A;  3WPY A;  3PIJ A;  3AKG A;  3K1U A;  4UDJ A;  3AKH A;  3BYN A;  5C2M A;  5A8C A;  1UYP A;  2YFR A;  3WPU A;  2AEY A;  2OXB A;  4PVI A;  5FMC A;  5A7V B;  5FIX A;  3C2U A;  2QQW A;  5FKB A;  3C7F A;  5GLM A;  1UV4 A;  4N2R A;  3ZXJ A;  1VKD A;  3NQH A;  4UDK A;  2QQV A;  3C7E A;  4NOV A;  5B6T A;  4UDI A;  3LDK A;  3PIG A;  4FFH A;  1Y4W A;  2QQU A;  2EXH A;  3LIG A;  3VT2 A;  3WPZ A;  4FFG A;  3WN1 A;  5GLQ A;  4U6D A;  3OM7 A;  3VSZ A;  4O8O A;  3UGH A;  4UDG A;  3R4Z A;  4MLG A;  4N1I A;  3LFI A;  4PVA A;  3VT1 A;  3UGF A;  3AKF A;  5A7V A;  3ZXL A;  4O8N A;  3VSR A;  2AC1 A;  3OM6 A;  4AK6 A;  3WAU A;  1GYD B;  1YI7 A;  3VSS A;  3LEM A;  1OYG A;  3KF5 A;  3QED A;  3ZXK A;  2X8T A;  3R4Y A;  4QQS A;  5GLR A;  5C0P A;  4FFI A;  3OM5 A;  5GLK A;  5GLP A;  4UDK E;  2YFS A;  3TAW A;  1YRZ A;  2ADD A;  2ADE A;  3R67 A;  2VDT A;  5FK7 A;  3VT0 A;  5A8D A;  3C7G A;  4KC8 A;  1W18 A;  3RWK X;  3CU9 A;  2EXJ A;  4N2Z A;  5GLO A;  3WAS A;  4KC7 A;  4KCA A;  5JOY A;  5GLN A;  5FLW A;  2X8F A;  5FMD A;  4COT A;  5AY9 A;  3BYJ A;  3KST A;  5AYC A;  3OM4 A;  3LIH A;  5FMB A;  3QZ4 A;  3WMY A;  3LF7 A;  4AK5 A;  1W2T A;  1ST8 A;  3QEF A;  5AYE A;  2YFT A;  3WAT A;  3U14 A;  1Y9G A;  3UGG A;  5JOX A; 
#chains in the Genus database with same CATH homology
 5AYD A;  3BYK A;  5JOZ A;  5B6S A;  3D60 A;  4O8P A;  5FK8 A;  4N4B A;  3KF3 A;  4U6B A;  5GLL A;  4KMI A;  3QC2 A;  1WL7 A;  1PT2 A;  3WN2 A;  1YIF A;  3U75 A;  3BYL A;  2AEZ A;  3C7O A;  3P2N A;  3VSF A;  2EXI A;  3AKI A;  4ONZ A;  1GYH A;  1GYE B;  3D5Z A;  4KCB A;  2EXK A;  3C7H A;  3D61 A;  3WMZ A;  2XQR A;  3D5Y A;  3LDR A;  1Y7B A;  3SC7 X;  3WN0 A;  3OM2 A;  3LV4 A;  2X8S A;  4EQV A;  1Y9M A;  4FFF A;  3QEE A;  5JOW A;  5ANN A;  5FKC A;  4AK7 A;  3WPV A;  2B4W A;  4D47 A;  3WPY A;  3PIJ A;  3AKG A;  3K1U A;  4UDJ A;  3AKH A;  3BYN A;  5A8C A;  1UYP A;  2YFR A;  3WPU A;  2AEY A;  2OXB A;  4PVI A;  5FMC A;  5A7V B;  5FIX A;  3C2U A;  2QQW A;  5FKB A;  3C7F A;  5GLM A;  1UV4 A;  4N2R A;  3ZXJ A;  1VKD A;  3NQH A;  4UDK A;  2QQV A;  3C7E A;  4NOV A;  5B6T A;  4UDI A;  3LDK A;  3PIG A;  4FFH A;  1Y4W A;  2QQU A;  2EXH A;  3LIG A;  3VT2 A;  3WPZ A;  4FFG A;  3WN1 A;  5GLQ A;  4U6D A;  3OM7 A;  3VSZ A;  4O8O A;  3UGH A;  4UDG A;  3R4Z A;  4MLG A;  4N1I A;  3LFI A;  4PVA A;  3VT1 A;  3UGF A;  3AKF A;  5A7V A;  3ZXL A;  4O8N A;  3VSR A;  2AC1 A;  3OM6 A;  4AK6 A;  3WAU A;  1GYD B;  1YI7 A;  3VSS A;  3LEM A;  1OYG A;  3KF5 A;  3QED A;  3ZXK A;  2X8T A;  3R4Y A;  4QQS A;  5GLR A;  5C0P A;  4FFI A;  3OM5 A;  5GLK A;  5GLP A;  4UDK E;  2YFS A;  3TAW A;  1YRZ A;  2ADD A;  2ADE A;  3R67 A;  2VDT A;  5FK7 A;  3VT0 A;  5A8D A;  3C7G A;  4KC8 A;  1W18 A;  3RWK X;  3CU9 A;  2EXJ A;  4N2Z A;  5GLO A;  3WAS A;  4KC7 A;  4KCA A;  5JOY A;  5GLN A;  5FLW A;  2X8F A;  5FMD A;  4COT A;  5AY9 A;  3BYJ A;  3KST A;  5AYC A;  3OM4 A;  3LIH A;  5FMB A;  3QZ4 A;  3WMY A;  3LF7 A;  4AK5 A;  1W2T A;  1ST8 A;  3QEF A;  5AYE A;  2YFT A;  3WAT A;  3U14 A;  1Y9G A;  3UGG A;  5JOX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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