2B4WA

Hypothetical protein from leishmania major
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
310
structure length
292
Chain Sequence
KQVKAAFEANKRVYESVLLTFKGVDGYDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEMIFGGTRVRILSYYGYFYRGTPDELTYFTRGPGCMKDIRVLQLQDGRLGVFSRPRVASIGFVILNSIDELGAEVIAKAPPLDILNAWGGVNQAYLLSSGKVGCIGHYSYEQSVYVNYAFVLDPQSRAITGAKIIGTKSCYPPCEPKVPLLADCVFASGIVMRSDGKVDLYSGVGDSHEGRITIDYPFKGHGTIIGDLHFPM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Hypothetical protein from leishmania major
rcsb
molecule tags Structural genomics, unknown function
source organism Leishmania major
molecule keywords hypothetical protein, conserved
total genus 65
structure length 292
sequence length 310
ec nomenclature
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08950 DUF1861 Protein of unknown function (DUF1861)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 2b4wA00
3AKFA 4MLGA 1Y4WA 4FFHA 1VKDA 3C2UA 3UGGA 1W2TA 5GLNA 3ZXKA 4KCAA 3R67A 5GLQA 1YI7A 3AKIA 1UV4A 5A7VB 4AK6A 3TAWA 3AKGA 1UYPA 4U6DA 1PT2A 1GYEB 3WPZA 5JOZA 4PVIA 3SC7X 3P2NA 2YFTA 5B6SA 3VSRA 3KF3A 4N2ZA 4N2RA 3ZXJA 2QQWA 3BYLA 5AY9A 3C7HA 5A8DA 5C0PA 5FLWA 5JOYA 2QQVA 5GLPA 2EXIA 3WPVA 3PIGA 5GLKA 3D60A 4FFGA 3VSFA 3KSTA 3UGFA 5A8CA 3LEMA 4O8PA 3ZXLA 3OM6A 3D5ZA 1W18A 4KC7A 3WN1A 2QQUA 3CU9A 4KMIA 4UDJA 4KC8A 3VT1A 3VT2A 3WPYA 3WATA 5GLRA 3PIJA 5GLOA 3R4YA 4U6BA 5AYEA 4COTA 1GYHA 3BYKA 5GLLA 4UDKE 4D47A 3VSZA 2X8TA 3WAUA 3BYJA 4N1IA 3QEDA 2AC1A 3LV4A 3LDRA 3WN2A 3WMYA 3C7EA 5GLMA 5FMCA 3C7OA 5JOXA 1Y9MA 2EXKA 1Y9GA 4UDIA 3D61A 3BYNA 5FK7A 5AYDA 4AK5A 3KF5A 5B6TA 3VT0A 4O8NA 3WPUA 2YFRA 5ANNA 3OM5A 3U75A 4N4BA 3LF7A 3U14A 2ADDA 2X8SA 1OYGA 2ADEA 1WL7A 5JOWA 4EQVA 3OM2A 5FK8A 4AK7A 2X8FA 2B4WA 3UGHA 4QQSA 3LFIA 1ST8A 1YRZA 2EXHA 4NOVA 3WMZA 3QZ4A 4PVAA 4FFFA 3NQHA 3K1UA 3R4ZA 3VSSA 3AKHA 4UDKA 5A7VA 1YIFA 2EXJA 3C7GA 5FIXA 3OM7A 4KCBA 1GYDB 3LDKA 2OXBA 3QEEA 5FMDA 2AEYA 3C7FA 4UDGA 5FKCA 3WASA 2XQRA 3LIHA 5FMBA 3QC2A 3RWKX 2AEZA 3OM4A 4FFIA 5FKBA 4ONZA 5AYCA 3WN0A 3D5YA 2YFSA 2VDTA 1Y7BA 4O8OA 3QEFA 3LIGA
chains in the Genus database with same CATH superfamily
3AKFA 4MLGA 1Y4WA 4FFHA 1VKDA 3C2UA 3UGGA 1W2TA 5GLNA 3ZXKA 4KCAA 3R67A 5GLQA 1YI7A 5C2MA 3AKIA 1UV4A 5A7VB 4AK6A 3TAWA 3AKGA 1UYPA 4U6DA 1PT2A 1GYEB 3WPZA 5JOZA 4PVIA 3SC7X 3P2NA 2YFTA 5B6SA 3VSRA 3KF3A 4N2ZA 4N2RA 3ZXJA 2QQWA 3BYLA 5AY9A 3C7HA 5A8DA 5C0PA 5FLWA 5JOYA 2QQVA 5GLPA 2EXIA 3WPVA 3PIGA 5GLKA 3D60A 4FFGA 3VSFA 3KSTA 3UGFA 5A8CA 3LEMA 4O8PA 3ZXLA 3OM6A 3D5ZA 1W18A 4KC7A 3WN1A 2QQUA 3CU9A 4KMIA 4UDJA 4KC8A 3VT1A 3VT2A 3WPYA 3WATA 5GLRA 3PIJA 5GLOA 3R4YA 4U6BA 5AYEA 4COTA 1GYHA 3BYKA 5GLLA 4UDKE 4D47A 3VSZA 2X8TA 3WAUA 3BYJA 4N1IA 3QEDA 2AC1A 3LV4A 3LDRA 3WN2A 3WMYA 3C7EA 5GLMA 5FMCA 3C7OA 5JOXA 1Y9MA 2EXKA 1Y9GA 4UDIA 3D61A 3BYNA 5FK7A 5AYDA 4AK5A 3KF5A 5B6TA 3VT0A 4O8NA 3WPUA 2YFRA 5ANNA 3OM5A 3U75A 4N4BA 3LF7A 3U14A 2ADDA 2X8SA 1OYGA 2ADEA 1WL7A 5JOWA 4EQVA 3OM2A 5FK8A 4AK7A 2X8FA 2B4WA 3UGHA 4QQSA 3LFIA 1ST8A 1YRZA 2EXHA 4NOVA 3WMZA 3QZ4A 4PVAA 4FFFA 3NQHA 3K1UA 3R4ZA 3VSSA 3AKHA 4UDKA 5A7VA 1YIFA 2EXJA 3C7GA 5FIXA 3OM7A 4KCBA 1GYDB 3LDKA 2OXBA 3QEEA 5FMDA 2AEYA 3C7FA 4UDGA 5FKCA 3WASA 2XQRA 3LIHA 1TL2A 5FMBA 3QC2A 3RWKX 2AEZA 3OM4A 4FFIA 5FKBA 4ONZA 5AYCA 3WN0A 3D5YA 2YFSA 2VDTA 1Y7BA 4O8OA 3QEFA 3LIGA
chains in the Genus database with same CATH topology
3AKFA 4MLGA 1Y4WA 4FFHA 1VKDA 3C2UA 3UGGA 1W2TA 5GLNA 3ZXKA 4KCAA 3R67A 5GLQA 1YI7A 3AKIA 1UV4A 5A7VB 4AK6A 3TAWA 3AKGA 1UYPA 4U6DA 1PT2A 1GYEB 3WPZA 5JOZA 4PVIA 3SC7X 3P2NA 2YFTA 5B6SA 3VSRA 3KF3A 4N2ZA 4N2RA 3ZXJA 2QQWA 3BYLA 5AY9A 3C7HA 5A8DA 5C0PA 5FLWA 5JOYA 2QQVA 5GLPA 2EXIA 3WPVA 3PIGA 5GLKA 3D60A 4FFGA 3VSFA 3KSTA 3UGFA 5A8CA 3LEMA 4O8PA 3ZXLA 3OM6A 3D5ZA 1W18A 4KC7A 3WN1A 2QQUA 3CU9A 4KMIA 4UDJA 4KC8A 3VT1A 3VT2A 3WPYA 3WATA 5GLRA 3PIJA 5GLOA 3R4YA 4U6BA 5AYEA 4COTA 1GYHA 3BYKA 5GLLA 4UDKE 4D47A 3VSZA 2X8TA 3WAUA 3BYJA 4N1IA 3QEDA 2AC1A 3LV4A 3LDRA 3WN2A 3WMYA 3C7EA 5GLMA 5FMCA 3C7OA 5JOXA 1Y9MA 2EXKA 1Y9GA 4UDIA 3D61A 3BYNA 5FK7A 5AYDA 4AK5A 3KF5A 5B6TA 3VT0A 4O8NA 3WPUA 2YFRA 5ANNA 3OM5A 3U75A 4N4BA 3LF7A 3U14A 2ADDA 2X8SA 1OYGA 2ADEA 1WL7A 5JOWA 4EQVA 3OM2A 5FK8A 4AK7A 2X8FA 2B4WA 3UGHA 4QQSA 3LFIA 1ST8A 1YRZA 2EXHA 4NOVA 3WMZA 3QZ4A 4PVAA 4FFFA 3NQHA 3K1UA 3R4ZA 3VSSA 3AKHA 4UDKA 5A7VA 1YIFA 2EXJA 3C7GA 5FIXA 3OM7A 4KCBA 1GYDB 3LDKA 2OXBA 3QEEA 5FMDA 2AEYA 3C7FA 4UDGA 5FKCA 3WASA 2XQRA 3LIHA 5FMBA 3QC2A 3RWKX 2AEZA 3OM4A 4FFIA 5FKBA 4ONZA 5AYCA 3WN0A 3D5YA 2YFSA 2VDTA 1Y7BA 4O8OA 3QEFA 3LIGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AKF A;  4MLG A;  1Y4W A;  4FFH A;  1VKD A;  3C2U A;  3UGG A;  1W2T A;  5GLN A;  3ZXK A;  4KCA A;  3R67 A;  5GLQ A;  1YI7 A;  3AKI A;  1UV4 A;  5A7V B;  4AK6 A;  3TAW A;  3AKG A;  1UYP A;  4U6D A;  1PT2 A;  1GYE B;  3WPZ A;  5JOZ A;  4PVI A;  3SC7 X;  3P2N A;  2YFT A;  5B6S A;  3VSR A;  3KF3 A;  4N2Z A;  4N2R A;  3ZXJ A;  2QQW A;  3BYL A;  5AY9 A;  3C7H A;  5A8D A;  5C0P A;  5FLW A;  5JOY A;  2QQV A;  5GLP A;  2EXI A;  3WPV A;  3PIG A;  5GLK A;  3D60 A;  4FFG A;  3VSF A;  3KST A;  3UGF A;  5A8C A;  3LEM A;  4O8P A;  3ZXL A;  3OM6 A;  3D5Z A;  1W18 A;  4KC7 A;  3WN1 A;  2QQU A;  3CU9 A;  4KMI A;  4UDJ A;  4KC8 A;  3VT1 A;  3VT2 A;  3WPY A;  3WAT A;  5GLR A;  3PIJ A;  5GLO A;  3R4Y A;  4U6B A;  5AYE A;  4COT A;  1GYH A;  3BYK A;  5GLL A;  4UDK E;  4D47 A;  3VSZ A;  2X8T A;  3WAU A;  3BYJ A;  4N1I A;  3QED A;  2AC1 A;  3LV4 A;  3LDR A;  3WN2 A;  3WMY A;  3C7E A;  5GLM A;  5FMC A;  3C7O A;  5JOX A;  1Y9M A;  2EXK A;  1Y9G A;  4UDI A;  3D61 A;  3BYN A;  5FK7 A;  5AYD A;  4AK5 A;  3KF5 A;  5B6T A;  3VT0 A;  4O8N A;  3WPU A;  2YFR A;  5ANN A;  3OM5 A;  3U75 A;  4N4B A;  3LF7 A;  3U14 A;  2ADD A;  2X8S A;  1OYG A;  2ADE A;  1WL7 A;  5JOW A;  4EQV A;  3OM2 A;  5FK8 A;  4AK7 A;  2X8F A;  2B4W A;  3UGH A;  4QQS A;  3LFI A;  1ST8 A;  1YRZ A;  2EXH A;  4NOV A;  3WMZ A;  3QZ4 A;  4PVA A;  4FFF A;  3NQH A;  3K1U A;  3R4Z A;  3VSS A;  3AKH A;  4UDK A;  5A7V A;  1YIF A;  2EXJ A;  3C7G A;  5FIX A;  3OM7 A;  4KCB A;  1GYD B;  3LDK A;  2OXB A;  3QEE A;  5FMD A;  2AEY A;  3C7F A;  4UDG A;  5FKC A;  3WAS A;  2XQR A;  3LIH A;  5FMB A;  3QC2 A;  3RWK X;  2AEZ A;  3OM4 A;  4FFI A;  5FKB A;  4ONZ A;  5AYC A;  3WN0 A;  3D5Y A;  2YFS A;  2VDT A;  1Y7B A;  4O8O A;  3QEF A;  3LIG A; 
#chains in the Genus database with same CATH topology
 3AKF A;  4MLG A;  1Y4W A;  4FFH A;  1VKD A;  3C2U A;  3UGG A;  1W2T A;  5GLN A;  3ZXK A;  4KCA A;  3R67 A;  5GLQ A;  1YI7 A;  5C2M A;  3AKI A;  1UV4 A;  5A7V B;  4AK6 A;  3TAW A;  3AKG A;  1UYP A;  4U6D A;  1PT2 A;  1GYE B;  3WPZ A;  5JOZ A;  4PVI A;  3SC7 X;  3P2N A;  2YFT A;  5B6S A;  3VSR A;  3KF3 A;  4N2Z A;  4N2R A;  3ZXJ A;  2QQW A;  3BYL A;  5AY9 A;  3C7H A;  5A8D A;  5C0P A;  5FLW A;  5JOY A;  2QQV A;  5GLP A;  2EXI A;  3WPV A;  3PIG A;  5GLK A;  3D60 A;  4FFG A;  3VSF A;  3KST A;  3UGF A;  5A8C A;  3LEM A;  4O8P A;  3ZXL A;  3OM6 A;  3D5Z A;  1W18 A;  4KC7 A;  3WN1 A;  2QQU A;  3CU9 A;  4KMI A;  4UDJ A;  4KC8 A;  3VT1 A;  3VT2 A;  3WPY A;  3WAT A;  5GLR A;  3PIJ A;  5GLO A;  3R4Y A;  4U6B A;  5AYE A;  4COT A;  1GYH A;  3BYK A;  5GLL A;  4UDK E;  4D47 A;  3VSZ A;  2X8T A;  3WAU A;  3BYJ A;  4N1I A;  3QED A;  2AC1 A;  3LV4 A;  3LDR A;  3WN2 A;  3WMY A;  3C7E A;  5GLM A;  5FMC A;  3C7O A;  5JOX A;  1Y9M A;  2EXK A;  1Y9G A;  4UDI A;  3D61 A;  3BYN A;  5FK7 A;  5AYD A;  4AK5 A;  3KF5 A;  5B6T A;  3VT0 A;  4O8N A;  3WPU A;  2YFR A;  5ANN A;  3OM5 A;  3U75 A;  4N4B A;  3LF7 A;  3U14 A;  2ADD A;  2X8S A;  1OYG A;  2ADE A;  1WL7 A;  5JOW A;  4EQV A;  3OM2 A;  5FK8 A;  4AK7 A;  2X8F A;  2B4W A;  3UGH A;  4QQS A;  3LFI A;  1ST8 A;  1YRZ A;  2EXH A;  4NOV A;  3WMZ A;  3QZ4 A;  4PVA A;  4FFF A;  3NQH A;  3K1U A;  3R4Z A;  3VSS A;  3AKH A;  4UDK A;  5A7V A;  1YIF A;  2EXJ A;  3C7G A;  5FIX A;  3OM7 A;  4KCB A;  1GYD B;  3LDK A;  2OXB A;  3QEE A;  5FMD A;  2AEY A;  3C7F A;  4UDG A;  5FKC A;  3WAS A;  2XQR A;  3LIH A;  1TL2 A;  5FMB A;  3QC2 A;  3RWK X;  2AEZ A;  3OM4 A;  4FFI A;  5FKB A;  4ONZ A;  5AYC A;  3WN0 A;  3D5Y A;  2YFS A;  2VDT A;  1Y7B A;  4O8O A;  3QEF A;  3LIG A; 
#chains in the Genus database with same CATH homology
 3AKF A;  4MLG A;  1Y4W A;  4FFH A;  1VKD A;  3C2U A;  3UGG A;  1W2T A;  5GLN A;  3ZXK A;  4KCA A;  3R67 A;  5GLQ A;  1YI7 A;  3AKI A;  1UV4 A;  5A7V B;  4AK6 A;  3TAW A;  3AKG A;  1UYP A;  4U6D A;  1PT2 A;  1GYE B;  3WPZ A;  5JOZ A;  4PVI A;  3SC7 X;  3P2N A;  2YFT A;  5B6S A;  3VSR A;  3KF3 A;  4N2Z A;  4N2R A;  3ZXJ A;  2QQW A;  3BYL A;  5AY9 A;  3C7H A;  5A8D A;  5C0P A;  5FLW A;  5JOY A;  2QQV A;  5GLP A;  2EXI A;  3WPV A;  3PIG A;  5GLK A;  3D60 A;  4FFG A;  3VSF A;  3KST A;  3UGF A;  5A8C A;  3LEM A;  4O8P A;  3ZXL A;  3OM6 A;  3D5Z A;  1W18 A;  4KC7 A;  3WN1 A;  2QQU A;  3CU9 A;  4KMI A;  4UDJ A;  4KC8 A;  3VT1 A;  3VT2 A;  3WPY A;  3WAT A;  5GLR A;  3PIJ A;  5GLO A;  3R4Y A;  4U6B A;  5AYE A;  4COT A;  1GYH A;  3BYK A;  5GLL A;  4UDK E;  4D47 A;  3VSZ A;  2X8T A;  3WAU A;  3BYJ A;  4N1I A;  3QED A;  2AC1 A;  3LV4 A;  3LDR A;  3WN2 A;  3WMY A;  3C7E A;  5GLM A;  5FMC A;  3C7O A;  5JOX A;  1Y9M A;  2EXK A;  1Y9G A;  4UDI A;  3D61 A;  3BYN A;  5FK7 A;  5AYD A;  4AK5 A;  3KF5 A;  5B6T A;  3VT0 A;  4O8N A;  3WPU A;  2YFR A;  5ANN A;  3OM5 A;  3U75 A;  4N4B A;  3LF7 A;  3U14 A;  2ADD A;  2X8S A;  1OYG A;  2ADE A;  1WL7 A;  5JOW A;  4EQV A;  3OM2 A;  5FK8 A;  4AK7 A;  2X8F A;  2B4W A;  3UGH A;  4QQS A;  3LFI A;  1ST8 A;  1YRZ A;  2EXH A;  4NOV A;  3WMZ A;  3QZ4 A;  4PVA A;  4FFF A;  3NQH A;  3K1U A;  3R4Z A;  3VSS A;  3AKH A;  4UDK A;  5A7V A;  1YIF A;  2EXJ A;  3C7G A;  5FIX A;  3OM7 A;  4KCB A;  1GYD B;  3LDK A;  2OXB A;  3QEE A;  5FMD A;  2AEY A;  3C7F A;  4UDG A;  5FKC A;  3WAS A;  2XQR A;  3LIH A;  5FMB A;  3QC2 A;  3RWK X;  2AEZ A;  3OM4 A;  4FFI A;  5FKB A;  4ONZ A;  5AYC A;  3WN0 A;  3D5Y A;  2YFS A;  2VDT A;  1Y7B A;  4O8O A;  3QEF A;  3LIG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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