3OM2A

Crystal structure of b. megaterium levansucrase mutant d257a
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
448
structure length
448
Chain Sequence
SKDFNNSYGISHITRDNMVKIPQQQNSDQFKVPAFDESTIKNIASAKGKNASGNTIDLDVWDSWPLQNADGTVATYHGYQIVFALAGDPKDSNDTSVYLFYKKAGDKSIDSWKNAGRVFKDSDKFVPNDPHLKNQTQEWSGSGTLTKDGKVRLFYTDYSGKQYGKQTLTTAQVNMSQPNDNTLKVDGVEDYKSIFDGDGKIYQTVQQFIDEGGYDTGDNHTLRAPHYIEDNGHKYLVFEANTGTEDGYQGEDSLYNRAYYGGNNPFFQSEKKKLLEGSNKEKASLANGALGIIELNDDYTLKKVMKPLITSNTVTDEIERANIFKKDGKWYLFTDSRGSKMTIDGIGQDDVYMLGYVSNTLTGKYKPLNDTGLVLHMDLDPNDKTFTYSHFAVPQTKGDNVVITSYMTNRGFYEDNHSTFAPSFLVNIDGSKTSVVKDRVLEQGQLTV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Levansucrase
publication title Polysaccharide Synthesis of the Levansucrase SacB from Bacillus megaterium Is Controlled by Distinct Surface Motifs.
pubmed doi rcsb
source organism Bacillus megaterium
total genus 137
structure length 448
sequence length 448
ec nomenclature ec 2.4.1.10: Levansucrase.
pdb deposition date 2010-08-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02435 Glyco_hydro_68 Levansucrase/Invertase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 3om2A01
5FKBA 1WL7A 3D61A 4MLGA 5GLNA 2X8SA 4U6BA 5A8DA 3VT0A 5C0PA 4EQVA 3ZXJA 3BYNA 2QQWA 3VSRA 1UV4A 1GYHA 5JOZA 2OXBA 4FFGA 3C7EA 4KCAA 5A7VA 5GLKA 3WPZA 2B4WA 5GLLA 2ADDA 3LDKA 3AKHA 5FKCA 5JOXA 5ANNA 4KMIA 1W18A 1GYEB 3BYKA 3P2NA 3VSZA 3UGFA 1Y7BA 2EXKA 3KF3A 3QC2A 3SC7X 2X8FA 5B6SA 2EXHA 3TAWA 5GLQA 3U14A 2ADEA 4UDKA 5GLRA 3UGGA 4O8PA 2EXJA 3C7OA 4KC8A 3BYJA 4D47A 2QQVA 3QEEA 3LDRA 4FFHA 2QQUA 3PIGA 3C2UA 5FK7A 3QEDA 4NOVA 3KSTA 5FMBA 3RWKX 3WAUA 5FK8A 4AK5A 3WASA 3BYLA 4N1IA 2YFRA 3NQHA 3OM6A 3U75A 1ST8A 3WN1A 3LFIA 3KF5A 3WMZA 4FFIA 4U6DA 5FLWA 1UYPA 2AC1A 5FIXA 2X8TA 3WMYA 3LIHA 3R67A 3R4ZA 3QZ4A 5AY9A 5GLPA 1PT2A 3D5ZA 4UDKE 3R4YA 5GLMA 1GYDB 3ZXLA 5JOYA 4COTA 3WN0A 5A7VB 3OM7A 4ONZA 5FMDA 2XQRA 4PVIA 5FMCA 3WPUA 4AK7A 4KC7A 3PIJA 4UDGA 2VDTA 3C7FA 4AK6A 3LEMA 3D5YA 2AEYA 1Y4WA 3OM4A 1W2TA 1Y9GA 4O8NA 3QEFA 3WATA 5AYEA 5B6TA 3UGHA 4N4BA 3AKFA 4N2RA 5AYDA 1OYGA 3AKGA 5JOWA 4QQSA 3K1UA 4UDIA 3C7HA 2YFTA 4KCBA 2AEZA 3OM5A 4O8OA 3OM2A 3CU9A 3VT2A 3AKIA 3C7GA 3LIGA 1YRZA 3LF7A 3WN2A 4PVAA 3ZXKA 5A8CA 5AYCA 3VT1A 3WPVA 3D60A 4N2ZA 4FFFA 2YFSA 3LV4A 3VSSA 2EXIA 1YIFA 1Y9MA 5GLOA 3VSFA 1VKDA 3WPYA 1YI7A 4UDJA
chains in the Genus database with same CATH superfamily
5FKBA 1WL7A 3D61A 4MLGA 5GLNA 2X8SA 4U6BA 5A8DA 3VT0A 5C0PA 4EQVA 3ZXJA 3BYNA 2QQWA 3VSRA 1UV4A 1GYHA 5JOZA 2OXBA 4FFGA 3C7EA 4KCAA 5A7VA 5GLKA 3WPZA 2B4WA 5GLLA 2ADDA 3LDKA 3AKHA 5FKCA 5JOXA 5ANNA 4KMIA 1W18A 1GYEB 3BYKA 3P2NA 3VSZA 3UGFA 1Y7BA 2EXKA 3KF3A 3QC2A 3SC7X 2X8FA 5B6SA 2EXHA 3TAWA 5GLQA 3U14A 2ADEA 4UDKA 5GLRA 3UGGA 4O8PA 2EXJA 3C7OA 4KC8A 3BYJA 4D47A 2QQVA 3QEEA 3LDRA 4FFHA 2QQUA 3PIGA 3C2UA 5FK7A 3QEDA 4NOVA 3KSTA 5FMBA 3RWKX 3WAUA 5FK8A 4AK5A 3WASA 3BYLA 4N1IA 2YFRA 3NQHA 3OM6A 1TL2A 3U75A 1ST8A 3WN1A 3LFIA 3KF5A 3WMZA 4FFIA 4U6DA 5FLWA 1UYPA 2AC1A 5FIXA 2X8TA 3WMYA 3LIHA 3R67A 3R4ZA 3QZ4A 5AY9A 5GLPA 1PT2A 3D5ZA 4UDKE 3R4YA 5GLMA 1GYDB 3ZXLA 5JOYA 4COTA 3WN0A 5A7VB 3OM7A 4ONZA 5FMDA 2XQRA 4PVIA 5FMCA 3WPUA 4AK7A 4KC7A 3PIJA 4UDGA 2VDTA 3C7FA 4AK6A 3LEMA 3D5YA 2AEYA 1Y4WA 3OM4A 1W2TA 1Y9GA 4O8NA 3QEFA 3WATA 5AYEA 5B6TA 3UGHA 4N4BA 3AKFA 4N2RA 5AYDA 1OYGA 3AKGA 5JOWA 4QQSA 3K1UA 4UDIA 3C7HA 2YFTA 4KCBA 2AEZA 3OM5A 4O8OA 5C2MA 3OM2A 3CU9A 3VT2A 3AKIA 3C7GA 3LIGA 1YRZA 3LF7A 3WN2A 4PVAA 3ZXKA 5A8CA 5AYCA 3VT1A 3WPVA 3D60A 4N2ZA 4FFFA 2YFSA 3LV4A 3VSSA 2EXIA 1YIFA 1Y9MA 5GLOA 3VSFA 1VKDA 3WPYA 1YI7A 4UDJA
chains in the Genus database with same CATH topology
5FKBA 1WL7A 3D61A 4MLGA 5GLNA 2X8SA 4U6BA 5A8DA 3VT0A 5C0PA 4EQVA 3ZXJA 3BYNA 2QQWA 3VSRA 1UV4A 1GYHA 5JOZA 2OXBA 4FFGA 3C7EA 4KCAA 5A7VA 5GLKA 3WPZA 2B4WA 5GLLA 2ADDA 3LDKA 3AKHA 5FKCA 5JOXA 5ANNA 4KMIA 1W18A 1GYEB 3BYKA 3P2NA 3VSZA 3UGFA 1Y7BA 2EXKA 3KF3A 3QC2A 3SC7X 2X8FA 5B6SA 2EXHA 3TAWA 5GLQA 3U14A 2ADEA 4UDKA 5GLRA 3UGGA 4O8PA 2EXJA 3C7OA 4KC8A 3BYJA 4D47A 2QQVA 3QEEA 3LDRA 4FFHA 2QQUA 3PIGA 3C2UA 5FK7A 3QEDA 4NOVA 3KSTA 5FMBA 3RWKX 3WAUA 5FK8A 4AK5A 3WASA 3BYLA 4N1IA 2YFRA 3NQHA 3OM6A 3U75A 1ST8A 3WN1A 3LFIA 3KF5A 3WMZA 4FFIA 4U6DA 5FLWA 1UYPA 2AC1A 5FIXA 2X8TA 3WMYA 3LIHA 3R67A 3R4ZA 3QZ4A 5AY9A 5GLPA 1PT2A 3D5ZA 4UDKE 3R4YA 5GLMA 1GYDB 3ZXLA 5JOYA 4COTA 3WN0A 5A7VB 3OM7A 4ONZA 5FMDA 2XQRA 4PVIA 5FMCA 3WPUA 4AK7A 4KC7A 3PIJA 4UDGA 2VDTA 3C7FA 4AK6A 3LEMA 3D5YA 2AEYA 1Y4WA 3OM4A 1W2TA 1Y9GA 4O8NA 3QEFA 3WATA 5AYEA 5B6TA 3UGHA 4N4BA 3AKFA 4N2RA 5AYDA 1OYGA 3AKGA 5JOWA 4QQSA 3K1UA 4UDIA 3C7HA 2YFTA 4KCBA 2AEZA 3OM5A 4O8OA 3OM2A 3CU9A 3VT2A 3AKIA 3C7GA 3LIGA 1YRZA 3LF7A 3WN2A 4PVAA 3ZXKA 5A8CA 5AYCA 3VT1A 3WPVA 3D60A 4N2ZA 4FFFA 2YFSA 3LV4A 3VSSA 2EXIA 1YIFA 1Y9MA 5GLOA 3VSFA 1VKDA 3WPYA 1YI7A 4UDJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FKB A;  1WL7 A;  3D61 A;  4MLG A;  5GLN A;  2X8S A;  4U6B A;  5A8D A;  3VT0 A;  5C0P A;  4EQV A;  3ZXJ A;  3BYN A;  2QQW A;  3VSR A;  1UV4 A;  1GYH A;  5JOZ A;  2OXB A;  4FFG A;  3C7E A;  4KCA A;  5A7V A;  5GLK A;  3WPZ A;  2B4W A;  5GLL A;  2ADD A;  3LDK A;  3AKH A;  5FKC A;  5JOX A;  5ANN A;  4KMI A;  1W18 A;  1GYE B;  3BYK A;  3P2N A;  3VSZ A;  3UGF A;  1Y7B A;  2EXK A;  3KF3 A;  3QC2 A;  3SC7 X;  2X8F A;  5B6S A;  2EXH A;  3TAW A;  5GLQ A;  3U14 A;  2ADE A;  4UDK A;  5GLR A;  3UGG A;  4O8P A;  2EXJ A;  3C7O A;  4KC8 A;  3BYJ A;  4D47 A;  2QQV A;  3QEE A;  3LDR A;  4FFH A;  2QQU A;  3PIG A;  3C2U A;  5FK7 A;  3QED A;  4NOV A;  3KST A;  5FMB A;  3RWK X;  3WAU A;  5FK8 A;  4AK5 A;  3WAS A;  3BYL A;  4N1I A;  2YFR A;  3NQH A;  3OM6 A;  3U75 A;  1ST8 A;  3WN1 A;  3LFI A;  3KF5 A;  3WMZ A;  4FFI A;  4U6D A;  5FLW A;  1UYP A;  2AC1 A;  5FIX A;  2X8T A;  3WMY A;  3LIH A;  3R67 A;  3R4Z A;  3QZ4 A;  5AY9 A;  5GLP A;  1PT2 A;  3D5Z A;  4UDK E;  3R4Y A;  5GLM A;  1GYD B;  3ZXL A;  5JOY A;  4COT A;  3WN0 A;  5A7V B;  3OM7 A;  4ONZ A;  5FMD A;  2XQR A;  4PVI A;  5FMC A;  3WPU A;  4AK7 A;  4KC7 A;  3PIJ A;  4UDG A;  2VDT A;  3C7F A;  4AK6 A;  3LEM A;  3D5Y A;  2AEY A;  1Y4W A;  3OM4 A;  1W2T A;  1Y9G A;  4O8N A;  3QEF A;  3WAT A;  5AYE A;  5B6T A;  3UGH A;  4N4B A;  3AKF A;  4N2R A;  5AYD A;  1OYG A;  3AKG A;  5JOW A;  4QQS A;  3K1U A;  4UDI A;  3C7H A;  2YFT A;  4KCB A;  2AEZ A;  3OM5 A;  4O8O A;  3OM2 A;  3CU9 A;  3VT2 A;  3AKI A;  3C7G A;  3LIG A;  1YRZ A;  3LF7 A;  3WN2 A;  4PVA A;  3ZXK A;  5A8C A;  5AYC A;  3VT1 A;  3WPV A;  3D60 A;  4N2Z A;  4FFF A;  2YFS A;  3LV4 A;  3VSS A;  2EXI A;  1YIF A;  1Y9M A;  5GLO A;  3VSF A;  1VKD A;  3WPY A;  1YI7 A;  4UDJ A; 
#chains in the Genus database with same CATH topology
 5FKB A;  1WL7 A;  3D61 A;  4MLG A;  5GLN A;  2X8S A;  4U6B A;  5A8D A;  3VT0 A;  5C0P A;  4EQV A;  3ZXJ A;  3BYN A;  2QQW A;  3VSR A;  1UV4 A;  1GYH A;  5JOZ A;  2OXB A;  4FFG A;  3C7E A;  4KCA A;  5A7V A;  5GLK A;  3WPZ A;  2B4W A;  5GLL A;  2ADD A;  3LDK A;  3AKH A;  5FKC A;  5JOX A;  5ANN A;  4KMI A;  1W18 A;  1GYE B;  3BYK A;  3P2N A;  3VSZ A;  3UGF A;  1Y7B A;  2EXK A;  3KF3 A;  3QC2 A;  3SC7 X;  2X8F A;  5B6S A;  2EXH A;  3TAW A;  5GLQ A;  3U14 A;  2ADE A;  4UDK A;  5GLR A;  3UGG A;  4O8P A;  2EXJ A;  3C7O A;  4KC8 A;  3BYJ A;  4D47 A;  2QQV A;  3QEE A;  3LDR A;  4FFH A;  2QQU A;  3PIG A;  3C2U A;  5FK7 A;  3QED A;  4NOV A;  3KST A;  5FMB A;  3RWK X;  3WAU A;  5FK8 A;  4AK5 A;  3WAS A;  3BYL A;  4N1I A;  2YFR A;  3NQH A;  3OM6 A;  1TL2 A;  3U75 A;  1ST8 A;  3WN1 A;  3LFI A;  3KF5 A;  3WMZ A;  4FFI A;  4U6D A;  5FLW A;  1UYP A;  2AC1 A;  5FIX A;  2X8T A;  3WMY A;  3LIH A;  3R67 A;  3R4Z A;  3QZ4 A;  5AY9 A;  5GLP A;  1PT2 A;  3D5Z A;  4UDK E;  3R4Y A;  5GLM A;  1GYD B;  3ZXL A;  5JOY A;  4COT A;  3WN0 A;  5A7V B;  3OM7 A;  4ONZ A;  5FMD A;  2XQR A;  4PVI A;  5FMC A;  3WPU A;  4AK7 A;  4KC7 A;  3PIJ A;  4UDG A;  2VDT A;  3C7F A;  4AK6 A;  3LEM A;  3D5Y A;  2AEY A;  1Y4W A;  3OM4 A;  1W2T A;  1Y9G A;  4O8N A;  3QEF A;  3WAT A;  5AYE A;  5B6T A;  3UGH A;  4N4B A;  3AKF A;  4N2R A;  5AYD A;  1OYG A;  3AKG A;  5JOW A;  4QQS A;  3K1U A;  4UDI A;  3C7H A;  2YFT A;  4KCB A;  2AEZ A;  3OM5 A;  4O8O A;  5C2M A;  3OM2 A;  3CU9 A;  3VT2 A;  3AKI A;  3C7G A;  3LIG A;  1YRZ A;  3LF7 A;  3WN2 A;  4PVA A;  3ZXK A;  5A8C A;  5AYC A;  3VT1 A;  3WPV A;  3D60 A;  4N2Z A;  4FFF A;  2YFS A;  3LV4 A;  3VSS A;  2EXI A;  1YIF A;  1Y9M A;  5GLO A;  3VSF A;  1VKD A;  3WPY A;  1YI7 A;  4UDJ A; 
#chains in the Genus database with same CATH homology
 5FKB A;  1WL7 A;  3D61 A;  4MLG A;  5GLN A;  2X8S A;  4U6B A;  5A8D A;  3VT0 A;  5C0P A;  4EQV A;  3ZXJ A;  3BYN A;  2QQW A;  3VSR A;  1UV4 A;  1GYH A;  5JOZ A;  2OXB A;  4FFG A;  3C7E A;  4KCA A;  5A7V A;  5GLK A;  3WPZ A;  2B4W A;  5GLL A;  2ADD A;  3LDK A;  3AKH A;  5FKC A;  5JOX A;  5ANN A;  4KMI A;  1W18 A;  1GYE B;  3BYK A;  3P2N A;  3VSZ A;  3UGF A;  1Y7B A;  2EXK A;  3KF3 A;  3QC2 A;  3SC7 X;  2X8F A;  5B6S A;  2EXH A;  3TAW A;  5GLQ A;  3U14 A;  2ADE A;  4UDK A;  5GLR A;  3UGG A;  4O8P A;  2EXJ A;  3C7O A;  4KC8 A;  3BYJ A;  4D47 A;  2QQV A;  3QEE A;  3LDR A;  4FFH A;  2QQU A;  3PIG A;  3C2U A;  5FK7 A;  3QED A;  4NOV A;  3KST A;  5FMB A;  3RWK X;  3WAU A;  5FK8 A;  4AK5 A;  3WAS A;  3BYL A;  4N1I A;  2YFR A;  3NQH A;  3OM6 A;  3U75 A;  1ST8 A;  3WN1 A;  3LFI A;  3KF5 A;  3WMZ A;  4FFI A;  4U6D A;  5FLW A;  1UYP A;  2AC1 A;  5FIX A;  2X8T A;  3WMY A;  3LIH A;  3R67 A;  3R4Z A;  3QZ4 A;  5AY9 A;  5GLP A;  1PT2 A;  3D5Z A;  4UDK E;  3R4Y A;  5GLM A;  1GYD B;  3ZXL A;  5JOY A;  4COT A;  3WN0 A;  5A7V B;  3OM7 A;  4ONZ A;  5FMD A;  2XQR A;  4PVI A;  5FMC A;  3WPU A;  4AK7 A;  4KC7 A;  3PIJ A;  4UDG A;  2VDT A;  3C7F A;  4AK6 A;  3LEM A;  3D5Y A;  2AEY A;  1Y4W A;  3OM4 A;  1W2T A;  1Y9G A;  4O8N A;  3QEF A;  3WAT A;  5AYE A;  5B6T A;  3UGH A;  4N4B A;  3AKF A;  4N2R A;  5AYD A;  1OYG A;  3AKG A;  5JOW A;  4QQS A;  3K1U A;  4UDI A;  3C7H A;  2YFT A;  4KCB A;  2AEZ A;  3OM5 A;  4O8O A;  3OM2 A;  3CU9 A;  3VT2 A;  3AKI A;  3C7G A;  3LIG A;  1YRZ A;  3LF7 A;  3WN2 A;  4PVA A;  3ZXK A;  5A8C A;  5AYC A;  3VT1 A;  3WPV A;  3D60 A;  4N2Z A;  4FFF A;  2YFS A;  3LV4 A;  3VSS A;  2EXI A;  1YIF A;  1Y9M A;  5GLO A;  3VSF A;  1VKD A;  3WPY A;  1YI7 A;  4UDJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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