3OM2A

Crystal structure of b. megaterium levansucrase mutant d257a
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
448
structure length
448
Chain Sequence
SKDFNNSYGISHITRDNMVKIPQQQNSDQFKVPAFDESTIKNIASAKGKNASGNTIDLDVWDSWPLQNADGTVATYHGYQIVFALAGDPKDSNDTSVYLFYKKAGDKSIDSWKNAGRVFKDSDKFVPNDPHLKNQTQEWSGSGTLTKDGKVRLFYTDYSGKQYGKQTLTTAQVNMSQPNDNTLKVDGVEDYKSIFDGDGKIYQTVQQFIDEGGYDTGDNHTLRAPHYIEDNGHKYLVFEANTGTEDGYQGEDSLYNRAYYGGNNPFFQSEKKKLLEGSNKEKASLANGALGIIELNDDYTLKKVMKPLITSNTVTDEIERANIFKKDGKWYLFTDSRGSKMTIDGIGQDDVYMLGYVSNTLTGKYKPLNDTGLVLHMDLDPNDKTFTYSHFAVPQTKGDNVVITSYMTNRGFYEDNHSTFAPSFLVNIDGSKTSVVKDRVLEQGQLTV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Levansucrase
publication title Polysaccharide Synthesis of the Levansucrase SacB from Bacillus megaterium Is Controlled by Distinct Surface Motifs.
pubmed doi rcsb
source organism Bacillus megaterium
total genus 137
structure length 448
sequence length 448
ec nomenclature ec 2.4.1.10: Levansucrase.
pdb deposition date 2010-08-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02435 Glyco_hydro_68 Levansucrase/Invertase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 3om2A01
5AYCA 5C0PA 1GYDB 1YI7A 2VDTA 1Y4WA 3C7GA 3UGGA 2QQWA 4U6DA 1W2TA 2B4WA 1VKDA 3OM7A 2YFRA 4NOVA 3WAUA 3LIHA 4O8PA 2X8SA 4AK7A 5GLQA 4N1IA 4QQSA 4UDGA 3PIGA 3AKIA 3OM6A 3U14A 3VSSA 3BYKA 1GYHA 3ZXJA 4KCAA 3WASA 2EXIA 3WPVA 5ANNA 4O8OA 3RWKX 3VT0A 3VT1A 3WPUA 3BYNA 5GLKA 4N2RA 3C7EA 3QZ4A 5GLRA 2YFTA 3U75A 4FFHA 3KSTA 3AKGA 3CU9A 3KF5A 4N4BA 3ZXKA 2AEZA 4D47A 3QEEA 4O8NA 4AK6A 5A7VA 3WN2A 3OM4A 3OM5A 5A8CA 2AEYA 3LF7A 3UGHA 5B6SA 2YFSA 2AC1A 1WL7A 4FFGA 3QC2A 4KC7A 3SC7X 1Y9MA 1W18A 4UDKE 5JOXA 1GYEB 3D61A 5A7VB 4UDJA 4EQVA 3OM2A 3C7FA 5FK8A 3C2UA 3VT2A 3BYJA 3LFIA 3TAWA 3VSZA 4FFIA 2X8TA 3NQHA 1YIFA 5GLNA 3C7HA 3LV4A 4ONZA 5FKBA 5JOYA 4U6BA 4PVIA 5AYDA 2XQRA 4UDKA 3LDKA 1Y7BA 5AYEA 4FFFA 3R4ZA 3D60A 3C7OA 2EXJA 3K1UA 4KCBA 3QEDA 4KMIA 3WATA 3WMZA 5GLMA 1OYGA 5JOWA 5FLWA 5FIXA 1Y9GA 3LIGA 3LEMA 5FKCA 5FMBA 3QEFA 2QQUA 5B6TA 2ADEA 3PIJA 3ZXLA 3D5YA 5AY9A 1UV4A 2X8FA 3WPYA 3WPZA 3R67A 2EXHA 4AK5A 1UYPA 2QQVA 4COTA 1ST8A 4MLGA 5A8DA 4N2ZA 1PT2A 2OXBA 5FK7A 3LDRA 5JOZA 5GLLA 2EXKA 4UDIA 3WMYA 3R4YA 3KF3A 3AKFA 4KC8A 4PVAA 3P2NA 3BYLA 5GLOA 3WN1A 5FMCA 3AKHA 1YRZA 3WN0A 3VSRA 3UGFA 3D5ZA 5FMDA 3VSFA 5GLPA 2ADDA
chains in the Genus database with same CATH superfamily
5AYCA 5C0PA 1GYDB 1YI7A 2VDTA 1Y4WA 5C2MA 3C7GA 3UGGA 2QQWA 4U6DA 1W2TA 2B4WA 1VKDA 3OM7A 2YFRA 4NOVA 3WAUA 3LIHA 4O8PA 2X8SA 4AK7A 5GLQA 4N1IA 4QQSA 4UDGA 3PIGA 3AKIA 3OM6A 3U14A 3VSSA 3BYKA 1GYHA 3ZXJA 4KCAA 3WASA 2EXIA 3WPVA 5ANNA 4O8OA 3RWKX 3VT0A 3VT1A 3WPUA 3BYNA 5GLKA 4N2RA 3C7EA 3QZ4A 5GLRA 2YFTA 3U75A 4FFHA 3KSTA 3AKGA 3CU9A 3KF5A 4N4BA 3ZXKA 2AEZA 4D47A 3QEEA 4O8NA 4AK6A 5A7VA 3WN2A 3OM4A 3OM5A 5A8CA 2AEYA 3LF7A 3UGHA 5B6SA 2YFSA 2AC1A 1WL7A 4FFGA 3QC2A 4KC7A 3SC7X 1Y9MA 1W18A 4UDKE 5JOXA 1GYEB 3D61A 5A7VB 4UDJA 4EQVA 3OM2A 3C7FA 5FK8A 3C2UA 3VT2A 3BYJA 3LFIA 1TL2A 3TAWA 3VSZA 4FFIA 2X8TA 3NQHA 1YIFA 5GLNA 3C7HA 3LV4A 4ONZA 5FKBA 5JOYA 4U6BA 4PVIA 5AYDA 2XQRA 4UDKA 3LDKA 1Y7BA 5AYEA 4FFFA 3R4ZA 3D60A 3C7OA 2EXJA 3K1UA 4KCBA 3QEDA 4KMIA 3WATA 3WMZA 5GLMA 1OYGA 5JOWA 5FLWA 5FIXA 1Y9GA 3LIGA 3LEMA 5FKCA 5FMBA 3QEFA 2QQUA 5B6TA 2ADEA 3PIJA 3ZXLA 3D5YA 5AY9A 1UV4A 2X8FA 3WPYA 3WPZA 3R67A 2EXHA 4AK5A 1UYPA 2QQVA 4COTA 1ST8A 4MLGA 5A8DA 4N2ZA 1PT2A 2OXBA 5FK7A 3LDRA 5JOZA 5GLLA 2EXKA 4UDIA 3WMYA 3R4YA 3KF3A 3AKFA 4KC8A 4PVAA 3P2NA 3BYLA 5GLOA 3WN1A 5FMCA 3AKHA 1YRZA 3WN0A 3VSRA 3UGFA 3D5ZA 5FMDA 3VSFA 5GLPA 2ADDA
chains in the Genus database with same CATH topology
5AYCA 5C0PA 1GYDB 1YI7A 2VDTA 1Y4WA 3C7GA 3UGGA 2QQWA 4U6DA 1W2TA 2B4WA 1VKDA 3OM7A 2YFRA 4NOVA 3WAUA 3LIHA 4O8PA 2X8SA 4AK7A 5GLQA 4N1IA 4QQSA 4UDGA 3PIGA 3AKIA 3OM6A 3U14A 3VSSA 3BYKA 1GYHA 3ZXJA 4KCAA 3WASA 2EXIA 3WPVA 5ANNA 4O8OA 3RWKX 3VT0A 3VT1A 3WPUA 3BYNA 5GLKA 4N2RA 3C7EA 3QZ4A 5GLRA 2YFTA 3U75A 4FFHA 3KSTA 3AKGA 3CU9A 3KF5A 4N4BA 3ZXKA 2AEZA 4D47A 3QEEA 4O8NA 4AK6A 5A7VA 3WN2A 3OM4A 3OM5A 5A8CA 2AEYA 3LF7A 3UGHA 5B6SA 2YFSA 2AC1A 1WL7A 4FFGA 3QC2A 4KC7A 3SC7X 1Y9MA 1W18A 4UDKE 5JOXA 1GYEB 3D61A 5A7VB 4UDJA 4EQVA 3OM2A 3C7FA 5FK8A 3C2UA 3VT2A 3BYJA 3LFIA 3TAWA 3VSZA 4FFIA 2X8TA 3NQHA 1YIFA 5GLNA 3C7HA 3LV4A 4ONZA 5FKBA 5JOYA 4U6BA 4PVIA 5AYDA 2XQRA 4UDKA 3LDKA 1Y7BA 5AYEA 4FFFA 3R4ZA 3D60A 3C7OA 2EXJA 3K1UA 4KCBA 3QEDA 4KMIA 3WATA 3WMZA 5GLMA 1OYGA 5JOWA 5FLWA 5FIXA 1Y9GA 3LIGA 3LEMA 5FKCA 5FMBA 3QEFA 2QQUA 5B6TA 2ADEA 3PIJA 3ZXLA 3D5YA 5AY9A 1UV4A 2X8FA 3WPYA 3WPZA 3R67A 2EXHA 4AK5A 1UYPA 2QQVA 4COTA 1ST8A 4MLGA 5A8DA 4N2ZA 1PT2A 2OXBA 5FK7A 3LDRA 5JOZA 5GLLA 2EXKA 4UDIA 3WMYA 3R4YA 3KF3A 3AKFA 4KC8A 4PVAA 3P2NA 3BYLA 5GLOA 3WN1A 5FMCA 3AKHA 1YRZA 3WN0A 3VSRA 3UGFA 3D5ZA 5FMDA 3VSFA 5GLPA 2ADDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5AYC A;  5C0P A;  1GYD B;  1YI7 A;  2VDT A;  1Y4W A;  3C7G A;  3UGG A;  2QQW A;  4U6D A;  1W2T A;  2B4W A;  1VKD A;  3OM7 A;  2YFR A;  4NOV A;  3WAU A;  3LIH A;  4O8P A;  2X8S A;  4AK7 A;  5GLQ A;  4N1I A;  4QQS A;  4UDG A;  3PIG A;  3AKI A;  3OM6 A;  3U14 A;  3VSS A;  3BYK A;  1GYH A;  3ZXJ A;  4KCA A;  3WAS A;  2EXI A;  3WPV A;  5ANN A;  4O8O A;  3RWK X;  3VT0 A;  3VT1 A;  3WPU A;  3BYN A;  5GLK A;  4N2R A;  3C7E A;  3QZ4 A;  5GLR A;  2YFT A;  3U75 A;  4FFH A;  3KST A;  3AKG A;  3CU9 A;  3KF5 A;  4N4B A;  3ZXK A;  2AEZ A;  4D47 A;  3QEE A;  4O8N A;  4AK6 A;  5A7V A;  3WN2 A;  3OM4 A;  3OM5 A;  5A8C A;  2AEY A;  3LF7 A;  3UGH A;  5B6S A;  2YFS A;  2AC1 A;  1WL7 A;  4FFG A;  3QC2 A;  4KC7 A;  3SC7 X;  1Y9M A;  1W18 A;  4UDK E;  5JOX A;  1GYE B;  3D61 A;  5A7V B;  4UDJ A;  4EQV A;  3OM2 A;  3C7F A;  5FK8 A;  3C2U A;  3VT2 A;  3BYJ A;  3LFI A;  3TAW A;  3VSZ A;  4FFI A;  2X8T A;  3NQH A;  1YIF A;  5GLN A;  3C7H A;  3LV4 A;  4ONZ A;  5FKB A;  5JOY A;  4U6B A;  4PVI A;  5AYD A;  2XQR A;  4UDK A;  3LDK A;  1Y7B A;  5AYE A;  4FFF A;  3R4Z A;  3D60 A;  3C7O A;  2EXJ A;  3K1U A;  4KCB A;  3QED A;  4KMI A;  3WAT A;  3WMZ A;  5GLM A;  1OYG A;  5JOW A;  5FLW A;  5FIX A;  1Y9G A;  3LIG A;  3LEM A;  5FKC A;  5FMB A;  3QEF A;  2QQU A;  5B6T A;  2ADE A;  3PIJ A;  3ZXL A;  3D5Y A;  5AY9 A;  1UV4 A;  2X8F A;  3WPY A;  3WPZ A;  3R67 A;  2EXH A;  4AK5 A;  1UYP A;  2QQV A;  4COT A;  1ST8 A;  4MLG A;  5A8D A;  4N2Z A;  1PT2 A;  2OXB A;  5FK7 A;  3LDR A;  5JOZ A;  5GLL A;  2EXK A;  4UDI A;  3WMY A;  3R4Y A;  3KF3 A;  3AKF A;  4KC8 A;  4PVA A;  3P2N A;  3BYL A;  5GLO A;  3WN1 A;  5FMC A;  3AKH A;  1YRZ A;  3WN0 A;  3VSR A;  3UGF A;  3D5Z A;  5FMD A;  3VSF A;  5GLP A;  2ADD A; 
#chains in the Genus database with same CATH topology
 5AYC A;  5C0P A;  1GYD B;  1YI7 A;  2VDT A;  1Y4W A;  5C2M A;  3C7G A;  3UGG A;  2QQW A;  4U6D A;  1W2T A;  2B4W A;  1VKD A;  3OM7 A;  2YFR A;  4NOV A;  3WAU A;  3LIH A;  4O8P A;  2X8S A;  4AK7 A;  5GLQ A;  4N1I A;  4QQS A;  4UDG A;  3PIG A;  3AKI A;  3OM6 A;  3U14 A;  3VSS A;  3BYK A;  1GYH A;  3ZXJ A;  4KCA A;  3WAS A;  2EXI A;  3WPV A;  5ANN A;  4O8O A;  3RWK X;  3VT0 A;  3VT1 A;  3WPU A;  3BYN A;  5GLK A;  4N2R A;  3C7E A;  3QZ4 A;  5GLR A;  2YFT A;  3U75 A;  4FFH A;  3KST A;  3AKG A;  3CU9 A;  3KF5 A;  4N4B A;  3ZXK A;  2AEZ A;  4D47 A;  3QEE A;  4O8N A;  4AK6 A;  5A7V A;  3WN2 A;  3OM4 A;  3OM5 A;  5A8C A;  2AEY A;  3LF7 A;  3UGH A;  5B6S A;  2YFS A;  2AC1 A;  1WL7 A;  4FFG A;  3QC2 A;  4KC7 A;  3SC7 X;  1Y9M A;  1W18 A;  4UDK E;  5JOX A;  1GYE B;  3D61 A;  5A7V B;  4UDJ A;  4EQV A;  3OM2 A;  3C7F A;  5FK8 A;  3C2U A;  3VT2 A;  3BYJ A;  3LFI A;  1TL2 A;  3TAW A;  3VSZ A;  4FFI A;  2X8T A;  3NQH A;  1YIF A;  5GLN A;  3C7H A;  3LV4 A;  4ONZ A;  5FKB A;  5JOY A;  4U6B A;  4PVI A;  5AYD A;  2XQR A;  4UDK A;  3LDK A;  1Y7B A;  5AYE A;  4FFF A;  3R4Z A;  3D60 A;  3C7O A;  2EXJ A;  3K1U A;  4KCB A;  3QED A;  4KMI A;  3WAT A;  3WMZ A;  5GLM A;  1OYG A;  5JOW A;  5FLW A;  5FIX A;  1Y9G A;  3LIG A;  3LEM A;  5FKC A;  5FMB A;  3QEF A;  2QQU A;  5B6T A;  2ADE A;  3PIJ A;  3ZXL A;  3D5Y A;  5AY9 A;  1UV4 A;  2X8F A;  3WPY A;  3WPZ A;  3R67 A;  2EXH A;  4AK5 A;  1UYP A;  2QQV A;  4COT A;  1ST8 A;  4MLG A;  5A8D A;  4N2Z A;  1PT2 A;  2OXB A;  5FK7 A;  3LDR A;  5JOZ A;  5GLL A;  2EXK A;  4UDI A;  3WMY A;  3R4Y A;  3KF3 A;  3AKF A;  4KC8 A;  4PVA A;  3P2N A;  3BYL A;  5GLO A;  3WN1 A;  5FMC A;  3AKH A;  1YRZ A;  3WN0 A;  3VSR A;  3UGF A;  3D5Z A;  5FMD A;  3VSF A;  5GLP A;  2ADD A; 
#chains in the Genus database with same CATH homology
 5AYC A;  5C0P A;  1GYD B;  1YI7 A;  2VDT A;  1Y4W A;  3C7G A;  3UGG A;  2QQW A;  4U6D A;  1W2T A;  2B4W A;  1VKD A;  3OM7 A;  2YFR A;  4NOV A;  3WAU A;  3LIH A;  4O8P A;  2X8S A;  4AK7 A;  5GLQ A;  4N1I A;  4QQS A;  4UDG A;  3PIG A;  3AKI A;  3OM6 A;  3U14 A;  3VSS A;  3BYK A;  1GYH A;  3ZXJ A;  4KCA A;  3WAS A;  2EXI A;  3WPV A;  5ANN A;  4O8O A;  3RWK X;  3VT0 A;  3VT1 A;  3WPU A;  3BYN A;  5GLK A;  4N2R A;  3C7E A;  3QZ4 A;  5GLR A;  2YFT A;  3U75 A;  4FFH A;  3KST A;  3AKG A;  3CU9 A;  3KF5 A;  4N4B A;  3ZXK A;  2AEZ A;  4D47 A;  3QEE A;  4O8N A;  4AK6 A;  5A7V A;  3WN2 A;  3OM4 A;  3OM5 A;  5A8C A;  2AEY A;  3LF7 A;  3UGH A;  5B6S A;  2YFS A;  2AC1 A;  1WL7 A;  4FFG A;  3QC2 A;  4KC7 A;  3SC7 X;  1Y9M A;  1W18 A;  4UDK E;  5JOX A;  1GYE B;  3D61 A;  5A7V B;  4UDJ A;  4EQV A;  3OM2 A;  3C7F A;  5FK8 A;  3C2U A;  3VT2 A;  3BYJ A;  3LFI A;  3TAW A;  3VSZ A;  4FFI A;  2X8T A;  3NQH A;  1YIF A;  5GLN A;  3C7H A;  3LV4 A;  4ONZ A;  5FKB A;  5JOY A;  4U6B A;  4PVI A;  5AYD A;  2XQR A;  4UDK A;  3LDK A;  1Y7B A;  5AYE A;  4FFF A;  3R4Z A;  3D60 A;  3C7O A;  2EXJ A;  3K1U A;  4KCB A;  3QED A;  4KMI A;  3WAT A;  3WMZ A;  5GLM A;  1OYG A;  5JOW A;  5FLW A;  5FIX A;  1Y9G A;  3LIG A;  3LEM A;  5FKC A;  5FMB A;  3QEF A;  2QQU A;  5B6T A;  2ADE A;  3PIJ A;  3ZXL A;  3D5Y A;  5AY9 A;  1UV4 A;  2X8F A;  3WPY A;  3WPZ A;  3R67 A;  2EXH A;  4AK5 A;  1UYP A;  2QQV A;  4COT A;  1ST8 A;  4MLG A;  5A8D A;  4N2Z A;  1PT2 A;  2OXB A;  5FK7 A;  3LDR A;  5JOZ A;  5GLL A;  2EXK A;  4UDI A;  3WMY A;  3R4Y A;  3KF3 A;  3AKF A;  4KC8 A;  4PVA A;  3P2N A;  3BYL A;  5GLO A;  3WN1 A;  5FMC A;  3AKH A;  1YRZ A;  3WN0 A;  3VSR A;  3UGF A;  3D5Z A;  5FMD A;  3VSF A;  5GLP A;  2ADD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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