3WASA

Crystal structure of 4-o-beta-d-mannosyl-d-glucose phosphorylase mgp complexed with man-glc+po4
Total Genus 109
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
109
sequence length
389
structure length
389
Chain Sequence
SLFNDKVAKLLAGHEALLMRKNEPVEEGNGVITRYRYPVLTAAHTPVFWRYDLNEETNPFLMERIGMNATLNAGAIKWDGKYLMLVRVEGADRKSFFAVAESPNGIDNFRFWEYPVTLPEDVVPATNVYDMRLTAHEDGWIYGIFCAERHDDNAPIGDLSSATATAGIARTKDLKNWERLPDLKTKSQQRNVVLHPEFVDGKYALYTRPQDGFIDTGSGGGIGWALIDDITHAEVGEEKIIDKRYYHTIKEVKNGEGPHPIKTPQGWLHLAHGVRNCAAGLRYVLYMYMTSLDDPTRLIASPAGYFMAPVGEERIGDVSNVLFSNGWIADDDGKVFIYYASSDTRMHVATSTIERLVDYCLHTPQDGFSSSASVEILKNLIERNLRLMK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 4-O-beta-D-mannosyl-D-glucose phosphorylase
publication title Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP
pubmed doi rcsb
source organism Bacteroides fragilis
total genus 109
structure length 389
sequence length 389
chains with identical sequence B
ec nomenclature ec 2.4.1.281: 4-O-beta-D-mannosyl-D-glucose phosphorylase.
pdb deposition date 2013-05-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04041 Glyco_hydro_130 beta-1,4-mannooligosaccharide phosphorylase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 3wasA00
3U14A 1PT2A 5A8CA 4PVAA 2XQRA 5ANNA 3OM7A 4AK7A 3UGFA 5FMDA 4KC7A 1WL7A 3LFIA 5GLMA 5GLLA 5FIXA 3QEDA 4O8NA 3LIGA 3D5YA 2AEYA 4N4BA 1Y9MA 3WPUA 3U75A 5FMBA 3AKFA 5C0PA 3BYKA 1GYHA 4PVIA 2YFTA 3OM2A 5GLOA 5GLRA 3AKGA 3C2UA 3LIHA 1UV4A 3TAWA 1UYPA 5FLWA 1W2TA 4FFGA 4KCBA 4COTA 5GLQA 4AK5A 5JOWA 3D5ZA 3QC2A 3VSRA 4EQVA 4MLGA 3WMZA 3WASA 2OXBA 3OM4A 3VT0A 2EXKA 2X8FA 5AYCA 4NOVA 2ADEA 1ST8A 3AKHA 5JOZA 3AKIA 3QEEA 5GLPA 3ZXJA 1OYGA 3WN2A 3UGHA 3WN1A 3K1UA 3R4YA 3LV4A 2VDTA 5AYDA 3OM5A 3CU9A 3WPYA 2AEZA 3R67A 3VSZA 3KF5A 3QEFA 4N1IA 3NQHA 4KMIA 1W18A 2X8TA 3KF3A 5FK7A 5GLNA 4UDKA 3OM6A 3P2NA 2AC1A 3WN0A 5GLKA 3C7GA 4ONZA 2B4WA 5A7VA 3ZXKA 4FFIA 5AYEA 1Y7BA 3PIGA 4KCAA 1Y9GA 3C7FA 3C7HA 3D60A 3LDRA 5A8DA 1YIFA 3C7OA 4N2ZA 5AY9A 2X8SA 3WAUA 3BYNA 4QQSA 3VSFA 3WATA 3BYLA 3C7EA 4UDJA 1YRZA 4FFHA 1GYEB 5B6SA 2QQWA 4UDIA 4N2RA 5FKCA 4FFFA 5JOXA 1VKDA 5A7VB 1GYDB 4O8PA 3VT1A 4AK6A 2YFRA 3VT2A 5FK8A 3WMYA 3UGGA 3LDKA 4UDGA 3WPVA 2QQUA 3QZ4A 4O8OA 3ZXLA 1YI7A 3RWKX 3PIJA 2QQVA 3VSSA 4D47A 3LF7A 4KC8A 2ADDA 5FKBA 3WPZA 5B6TA 1Y4WA 2EXHA 5FMCA 4U6DA 3BYJA 4U6BA 4UDKE 3KSTA 5JOYA 3SC7X 2YFSA 2EXJA 3LEMA 3D61A 3R4ZA 2EXIA
chains in the Genus database with same CATH superfamily
3U14A 1PT2A 5A8CA 4PVAA 2XQRA 5ANNA 3OM7A 4AK7A 3UGFA 5FMDA 4KC7A 1WL7A 3LFIA 5GLMA 5GLLA 5FIXA 3QEDA 4O8NA 3LIGA 3D5YA 2AEYA 4N4BA 1Y9MA 3WPUA 3U75A 1TL2A 5FMBA 3AKFA 5C0PA 3BYKA 1GYHA 4PVIA 2YFTA 3OM2A 5GLOA 5GLRA 3AKGA 3C2UA 3LIHA 1UV4A 3TAWA 1UYPA 5FLWA 1W2TA 4FFGA 4KCBA 4COTA 5GLQA 4AK5A 5JOWA 3D5ZA 3QC2A 3VSRA 4EQVA 4MLGA 3WMZA 3WASA 2OXBA 3OM4A 3VT0A 2EXKA 2X8FA 5AYCA 4NOVA 2ADEA 1ST8A 3AKHA 5JOZA 3AKIA 3QEEA 5GLPA 3ZXJA 1OYGA 3WN2A 3UGHA 3WN1A 3K1UA 3R4YA 3LV4A 2VDTA 5AYDA 3OM5A 3CU9A 3WPYA 2AEZA 3R67A 3VSZA 3KF5A 3QEFA 4N1IA 3NQHA 4KMIA 1W18A 2X8TA 3KF3A 5FK7A 5GLNA 4UDKA 3OM6A 3P2NA 2AC1A 3WN0A 5GLKA 3C7GA 4ONZA 2B4WA 5A7VA 3ZXKA 4FFIA 5AYEA 1Y7BA 3PIGA 4KCAA 1Y9GA 3C7FA 3C7HA 3D60A 3LDRA 5A8DA 5C2MA 1YIFA 3C7OA 4N2ZA 5AY9A 2X8SA 3WAUA 3BYNA 4QQSA 3VSFA 3WATA 3BYLA 3C7EA 4UDJA 1YRZA 4FFHA 1GYEB 5B6SA 2QQWA 4UDIA 4N2RA 5FKCA 4FFFA 5JOXA 1VKDA 5A7VB 1GYDB 4O8PA 3VT1A 4AK6A 2YFRA 3VT2A 5FK8A 3WMYA 3UGGA 3LDKA 4UDGA 3WPVA 2QQUA 3QZ4A 4O8OA 3ZXLA 1YI7A 3RWKX 3PIJA 2QQVA 3VSSA 4D47A 3LF7A 4KC8A 2ADDA 5FKBA 3WPZA 5B6TA 1Y4WA 2EXHA 5FMCA 4U6DA 3BYJA 4U6BA 4UDKE 3KSTA 5JOYA 3SC7X 2YFSA 2EXJA 3LEMA 3D61A 3R4ZA 2EXIA
chains in the Genus database with same CATH topology
3U14A 1PT2A 5A8CA 4PVAA 2XQRA 5ANNA 3OM7A 4AK7A 3UGFA 5FMDA 4KC7A 1WL7A 3LFIA 5GLMA 5GLLA 5FIXA 3QEDA 4O8NA 3LIGA 3D5YA 2AEYA 4N4BA 1Y9MA 3WPUA 3U75A 5FMBA 3AKFA 5C0PA 3BYKA 1GYHA 4PVIA 2YFTA 3OM2A 5GLOA 5GLRA 3AKGA 3C2UA 3LIHA 1UV4A 3TAWA 1UYPA 5FLWA 1W2TA 4FFGA 4KCBA 4COTA 5GLQA 4AK5A 5JOWA 3D5ZA 3QC2A 3VSRA 4EQVA 4MLGA 3WMZA 3WASA 2OXBA 3OM4A 3VT0A 2EXKA 2X8FA 5AYCA 4NOVA 2ADEA 1ST8A 3AKHA 5JOZA 3AKIA 3QEEA 5GLPA 3ZXJA 1OYGA 3WN2A 3UGHA 3WN1A 3K1UA 3R4YA 3LV4A 2VDTA 5AYDA 3OM5A 3CU9A 3WPYA 2AEZA 3R67A 3VSZA 3KF5A 3QEFA 4N1IA 3NQHA 4KMIA 1W18A 2X8TA 3KF3A 5FK7A 5GLNA 4UDKA 3OM6A 3P2NA 2AC1A 3WN0A 5GLKA 3C7GA 4ONZA 2B4WA 5A7VA 3ZXKA 4FFIA 5AYEA 1Y7BA 3PIGA 4KCAA 1Y9GA 3C7FA 3C7HA 3D60A 3LDRA 5A8DA 1YIFA 3C7OA 4N2ZA 5AY9A 2X8SA 3WAUA 3BYNA 4QQSA 3VSFA 3WATA 3BYLA 3C7EA 4UDJA 1YRZA 4FFHA 1GYEB 5B6SA 2QQWA 4UDIA 4N2RA 5FKCA 4FFFA 5JOXA 1VKDA 5A7VB 1GYDB 4O8PA 3VT1A 4AK6A 2YFRA 3VT2A 5FK8A 3WMYA 3UGGA 3LDKA 4UDGA 3WPVA 2QQUA 3QZ4A 4O8OA 3ZXLA 1YI7A 3RWKX 3PIJA 2QQVA 3VSSA 4D47A 3LF7A 4KC8A 2ADDA 5FKBA 3WPZA 5B6TA 1Y4WA 2EXHA 5FMCA 4U6DA 3BYJA 4U6BA 4UDKE 3KSTA 5JOYA 3SC7X 2YFSA 2EXJA 3LEMA 3D61A 3R4ZA 2EXIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3U14 A;  1PT2 A;  5A8C A;  4PVA A;  2XQR A;  5ANN A;  3OM7 A;  4AK7 A;  3UGF A;  5FMD A;  4KC7 A;  1WL7 A;  3LFI A;  5GLM A;  5GLL A;  5FIX A;  3QED A;  4O8N A;  3LIG A;  3D5Y A;  2AEY A;  4N4B A;  1Y9M A;  3WPU A;  3U75 A;  5FMB A;  3AKF A;  5C0P A;  3BYK A;  1GYH A;  4PVI A;  2YFT A;  3OM2 A;  5GLO A;  5GLR A;  3AKG A;  3C2U A;  3LIH A;  1UV4 A;  3TAW A;  1UYP A;  5FLW A;  1W2T A;  4FFG A;  4KCB A;  4COT A;  5GLQ A;  4AK5 A;  5JOW A;  3D5Z A;  3QC2 A;  3VSR A;  4EQV A;  4MLG A;  3WMZ A;  3WAS A;  2OXB A;  3OM4 A;  3VT0 A;  2EXK A;  2X8F A;  5AYC A;  4NOV A;  2ADE A;  1ST8 A;  3AKH A;  5JOZ A;  3AKI A;  3QEE A;  5GLP A;  3ZXJ A;  1OYG A;  3WN2 A;  3UGH A;  3WN1 A;  3K1U A;  3R4Y A;  3LV4 A;  2VDT A;  5AYD A;  3OM5 A;  3CU9 A;  3WPY A;  2AEZ A;  3R67 A;  3VSZ A;  3KF5 A;  3QEF A;  4N1I A;  3NQH A;  4KMI A;  1W18 A;  2X8T A;  3KF3 A;  5FK7 A;  5GLN A;  4UDK A;  3OM6 A;  3P2N A;  2AC1 A;  3WN0 A;  5GLK A;  3C7G A;  4ONZ A;  2B4W A;  5A7V A;  3ZXK A;  4FFI A;  5AYE A;  1Y7B A;  3PIG A;  4KCA A;  1Y9G A;  3C7F A;  3C7H A;  3D60 A;  3LDR A;  5A8D A;  1YIF A;  3C7O A;  4N2Z A;  5AY9 A;  2X8S A;  3WAU A;  3BYN A;  4QQS A;  3VSF A;  3WAT A;  3BYL A;  3C7E A;  4UDJ A;  1YRZ A;  4FFH A;  1GYE B;  5B6S A;  2QQW A;  4UDI A;  4N2R A;  5FKC A;  4FFF A;  5JOX A;  1VKD A;  5A7V B;  1GYD B;  4O8P A;  3VT1 A;  4AK6 A;  2YFR A;  3VT2 A;  5FK8 A;  3WMY A;  3UGG A;  3LDK A;  4UDG A;  3WPV A;  2QQU A;  3QZ4 A;  4O8O A;  3ZXL A;  1YI7 A;  3RWK X;  3PIJ A;  2QQV A;  3VSS A;  4D47 A;  3LF7 A;  4KC8 A;  2ADD A;  5FKB A;  3WPZ A;  5B6T A;  1Y4W A;  2EXH A;  5FMC A;  4U6D A;  3BYJ A;  4U6B A;  4UDK E;  3KST A;  5JOY A;  3SC7 X;  2YFS A;  2EXJ A;  3LEM A;  3D61 A;  3R4Z A;  2EXI A; 
#chains in the Genus database with same CATH topology
 3U14 A;  1PT2 A;  5A8C A;  4PVA A;  2XQR A;  5ANN A;  3OM7 A;  4AK7 A;  3UGF A;  5FMD A;  4KC7 A;  1WL7 A;  3LFI A;  5GLM A;  5GLL A;  5FIX A;  3QED A;  4O8N A;  3LIG A;  3D5Y A;  2AEY A;  4N4B A;  1Y9M A;  3WPU A;  3U75 A;  1TL2 A;  5FMB A;  3AKF A;  5C0P A;  3BYK A;  1GYH A;  4PVI A;  2YFT A;  3OM2 A;  5GLO A;  5GLR A;  3AKG A;  3C2U A;  3LIH A;  1UV4 A;  3TAW A;  1UYP A;  5FLW A;  1W2T A;  4FFG A;  4KCB A;  4COT A;  5GLQ A;  4AK5 A;  5JOW A;  3D5Z A;  3QC2 A;  3VSR A;  4EQV A;  4MLG A;  3WMZ A;  3WAS A;  2OXB A;  3OM4 A;  3VT0 A;  2EXK A;  2X8F A;  5AYC A;  4NOV A;  2ADE A;  1ST8 A;  3AKH A;  5JOZ A;  3AKI A;  3QEE A;  5GLP A;  3ZXJ A;  1OYG A;  3WN2 A;  3UGH A;  3WN1 A;  3K1U A;  3R4Y A;  3LV4 A;  2VDT A;  5AYD A;  3OM5 A;  3CU9 A;  3WPY A;  2AEZ A;  3R67 A;  3VSZ A;  3KF5 A;  3QEF A;  4N1I A;  3NQH A;  4KMI A;  1W18 A;  2X8T A;  3KF3 A;  5FK7 A;  5GLN A;  4UDK A;  3OM6 A;  3P2N A;  2AC1 A;  3WN0 A;  5GLK A;  3C7G A;  4ONZ A;  2B4W A;  5A7V A;  3ZXK A;  4FFI A;  5AYE A;  1Y7B A;  3PIG A;  4KCA A;  1Y9G A;  3C7F A;  3C7H A;  3D60 A;  3LDR A;  5A8D A;  5C2M A;  1YIF A;  3C7O A;  4N2Z A;  5AY9 A;  2X8S A;  3WAU A;  3BYN A;  4QQS A;  3VSF A;  3WAT A;  3BYL A;  3C7E A;  4UDJ A;  1YRZ A;  4FFH A;  1GYE B;  5B6S A;  2QQW A;  4UDI A;  4N2R A;  5FKC A;  4FFF A;  5JOX A;  1VKD A;  5A7V B;  1GYD B;  4O8P A;  3VT1 A;  4AK6 A;  2YFR A;  3VT2 A;  5FK8 A;  3WMY A;  3UGG A;  3LDK A;  4UDG A;  3WPV A;  2QQU A;  3QZ4 A;  4O8O A;  3ZXL A;  1YI7 A;  3RWK X;  3PIJ A;  2QQV A;  3VSS A;  4D47 A;  3LF7 A;  4KC8 A;  2ADD A;  5FKB A;  3WPZ A;  5B6T A;  1Y4W A;  2EXH A;  5FMC A;  4U6D A;  3BYJ A;  4U6B A;  4UDK E;  3KST A;  5JOY A;  3SC7 X;  2YFS A;  2EXJ A;  3LEM A;  3D61 A;  3R4Z A;  2EXI A; 
#chains in the Genus database with same CATH homology
 3U14 A;  1PT2 A;  5A8C A;  4PVA A;  2XQR A;  5ANN A;  3OM7 A;  4AK7 A;  3UGF A;  5FMD A;  4KC7 A;  1WL7 A;  3LFI A;  5GLM A;  5GLL A;  5FIX A;  3QED A;  4O8N A;  3LIG A;  3D5Y A;  2AEY A;  4N4B A;  1Y9M A;  3WPU A;  3U75 A;  5FMB A;  3AKF A;  5C0P A;  3BYK A;  1GYH A;  4PVI A;  2YFT A;  3OM2 A;  5GLO A;  5GLR A;  3AKG A;  3C2U A;  3LIH A;  1UV4 A;  3TAW A;  1UYP A;  5FLW A;  1W2T A;  4FFG A;  4KCB A;  4COT A;  5GLQ A;  4AK5 A;  5JOW A;  3D5Z A;  3QC2 A;  3VSR A;  4EQV A;  4MLG A;  3WMZ A;  3WAS A;  2OXB A;  3OM4 A;  3VT0 A;  2EXK A;  2X8F A;  5AYC A;  4NOV A;  2ADE A;  1ST8 A;  3AKH A;  5JOZ A;  3AKI A;  3QEE A;  5GLP A;  3ZXJ A;  1OYG A;  3WN2 A;  3UGH A;  3WN1 A;  3K1U A;  3R4Y A;  3LV4 A;  2VDT A;  5AYD A;  3OM5 A;  3CU9 A;  3WPY A;  2AEZ A;  3R67 A;  3VSZ A;  3KF5 A;  3QEF A;  4N1I A;  3NQH A;  4KMI A;  1W18 A;  2X8T A;  3KF3 A;  5FK7 A;  5GLN A;  4UDK A;  3OM6 A;  3P2N A;  2AC1 A;  3WN0 A;  5GLK A;  3C7G A;  4ONZ A;  2B4W A;  5A7V A;  3ZXK A;  4FFI A;  5AYE A;  1Y7B A;  3PIG A;  4KCA A;  1Y9G A;  3C7F A;  3C7H A;  3D60 A;  3LDR A;  5A8D A;  1YIF A;  3C7O A;  4N2Z A;  5AY9 A;  2X8S A;  3WAU A;  3BYN A;  4QQS A;  3VSF A;  3WAT A;  3BYL A;  3C7E A;  4UDJ A;  1YRZ A;  4FFH A;  1GYE B;  5B6S A;  2QQW A;  4UDI A;  4N2R A;  5FKC A;  4FFF A;  5JOX A;  1VKD A;  5A7V B;  1GYD B;  4O8P A;  3VT1 A;  4AK6 A;  2YFR A;  3VT2 A;  5FK8 A;  3WMY A;  3UGG A;  3LDK A;  4UDG A;  3WPV A;  2QQU A;  3QZ4 A;  4O8O A;  3ZXL A;  1YI7 A;  3RWK X;  3PIJ A;  2QQV A;  3VSS A;  4D47 A;  3LF7 A;  4KC8 A;  2ADD A;  5FKB A;  3WPZ A;  5B6T A;  1Y4W A;  2EXH A;  5FMC A;  4U6D A;  3BYJ A;  4U6B A;  4UDK E;  3KST A;  5JOY A;  3SC7 X;  2YFS A;  2EXJ A;  3LEM A;  3D61 A;  3R4Z A;  2EXI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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