3WPVA

Microbacterium saccharophilum k-1 beta-fructofuranosidase mutant t47s/f447v/f470y/p500s
Total Genus 152
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
152
sequence length
538
structure length
538
Chain Sequence
LQDGPEPSIHTQQAYAPEDDFTAKWTRADARQLQRMSDPTAPSRENSMPASVTMPTVPQDFPDMSNEQVWVWDTWPLTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSHQTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLTEWEFLPPILSANCVTDQTERPQIYFKDGKSYLFTISHRGTFAAGLDGPEGVYGFVGDGIRSDYQPLNGGSGLALGNPTNLNFLGGQPFAPDVNQHPGHFQAYSHYVMPGGLVQSYIDTIGTHDDFVRGGTLAPTVKMDIGVGGDSTKTAVDYSYGSEGLGGWADIPANKHLFTNGKFGVAVSDEAAQKIRKILGSKFDDYLDGKPVSATVRALIEKLLAQYG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Beta-fructofuranosidase
publication title Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase
pubmed doi rcsb
source organism Arthrobacter
total genus 152
structure length 538
sequence length 538
chains with identical sequence B, C
ec nomenclature ec 3.2.1.26: Beta-fructofuranosidase.
pdb deposition date 2014-01-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02435 Glyco_hydro_68 Levansucrase/Invertase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 3wpvA01
3AKGA 3C7HA 3WN1A 4AK5A 5FMCA 5GLKA 2AC1A 5AYCA 4FFFA 1GYEB 2VDTA 4PVAA 3QC2A 2EXJA 3VSRA 1GYHA 4FFIA 4U6DA 3D60A 2X8TA 3QEFA 3R4ZA 2QQUA 2YFSA 4AK6A 5FKCA 3OM6A 2ADDA 2ADEA 5FLWA 4O8NA 4UDKE 4FFGA 5FK8A 3WPVA 2B4WA 1GYDB 1W18A 4O8PA 5C0PA 3D5ZA 4UDGA 4MLGA 5A7VA 5AYEA 3KF3A 3K1UA 3LIGA 3WPYA 5A8DA 3BYJA 3BYKA 5FIXA 5AYDA 1Y9MA 5FKBA 2AEYA 4COTA 3ZXLA 1Y4WA 5GLLA 4PVIA 3U14A 2EXHA 2XQRA 3VT1A 4EQVA 3BYNA 4U6BA 5JOXA 3OM7A 1YRZA 5FMDA 3LIHA 3U75A 3UGHA 2OXBA 5B6SA 3LDKA 5FMBA 4QQSA 3UGGA 4KCBA 4N2ZA 2QQWA 3LV4A 1Y9GA 3TAWA 5A8CA 4UDIA 3AKHA 5JOZA 5FK7A 3QEEA 5B6TA 4UDKA 5JOWA 3LF7A 3WMYA 4ONZA 1Y7BA 4NOVA 5GLMA 3LDRA 2EXIA 4UDJA 1UYPA 5JOYA 2AEZA 1VKDA 1UV4A 5GLOA 5GLQA 3LFIA 3C7OA 3KF5A 3C7FA 3OM5A 5ANNA 3D5YA 3RWKX 5A7VB 3WAUA 2YFTA 3VSZA 4D47A 3LEMA 3PIGA 1PT2A 4KC7A 1YIFA 3OM4A 4AK7A 3R4YA 2EXKA 3WATA 3AKIA 3CU9A 4KC8A 3VSSA 3VT0A 3D61A 3P2NA 3UGFA 3KSTA 2X8FA 4O8OA 3ZXJA 3WN0A 3QZ4A 2QQVA 4N4BA 4KMIA 3SC7X 4KCAA 3R67A 1ST8A 3C2UA 5GLNA 3AKFA 3VSFA 3C7EA 2YFRA 4N2RA 1YI7A 3WMZA 3QEDA 5GLPA 1WL7A 3BYLA 3C7GA 2X8SA 5AY9A 3ZXKA 5GLRA 3WASA 3WPUA 1OYGA 3WPZA 3OM2A 3WN2A 1W2TA 3VT2A 3PIJA 4N1IA 3NQHA 4FFHA
chains in the Genus database with same CATH superfamily
3AKGA 3C7HA 3WN1A 4AK5A 5FMCA 5GLKA 2AC1A 5AYCA 4FFFA 1GYEB 2VDTA 4PVAA 3QC2A 2EXJA 3VSRA 1GYHA 4FFIA 1TL2A 4U6DA 3D60A 2X8TA 3QEFA 3R4ZA 2QQUA 2YFSA 4AK6A 5FKCA 3OM6A 2ADDA 2ADEA 5FLWA 4O8NA 4UDKE 4FFGA 5FK8A 3WPVA 2B4WA 1GYDB 1W18A 4O8PA 5C0PA 3D5ZA 4UDGA 4MLGA 5A7VA 5AYEA 3KF3A 3K1UA 3LIGA 3WPYA 5A8DA 3BYJA 3BYKA 5FIXA 5AYDA 1Y9MA 5FKBA 2AEYA 4COTA 3ZXLA 1Y4WA 5GLLA 4PVIA 3U14A 2EXHA 2XQRA 3VT1A 4EQVA 3BYNA 4U6BA 5JOXA 3OM7A 1YRZA 5FMDA 3LIHA 3U75A 3UGHA 2OXBA 5B6SA 3LDKA 5FMBA 4QQSA 3UGGA 4KCBA 4N2ZA 2QQWA 3LV4A 1Y9GA 3TAWA 5A8CA 4UDIA 3AKHA 5JOZA 5FK7A 3QEEA 5B6TA 4UDKA 5JOWA 3LF7A 3WMYA 4ONZA 1Y7BA 4NOVA 5GLMA 3LDRA 2EXIA 4UDJA 1UYPA 5JOYA 2AEZA 1VKDA 1UV4A 5GLOA 5GLQA 3LFIA 3C7OA 5C2MA 3KF5A 3C7FA 3OM5A 5ANNA 3D5YA 3RWKX 5A7VB 3WAUA 2YFTA 3VSZA 4D47A 3LEMA 3PIGA 1PT2A 4KC7A 1YIFA 3OM4A 4AK7A 3R4YA 2EXKA 3WATA 3AKIA 3CU9A 4KC8A 3VSSA 3VT0A 3D61A 3P2NA 3UGFA 3KSTA 2X8FA 4O8OA 3ZXJA 3WN0A 3QZ4A 2QQVA 4N4BA 4KMIA 3SC7X 4KCAA 3R67A 1ST8A 3C2UA 5GLNA 3AKFA 3VSFA 3C7EA 2YFRA 4N2RA 1YI7A 3WMZA 3QEDA 5GLPA 1WL7A 3BYLA 3C7GA 2X8SA 5AY9A 3ZXKA 5GLRA 3WASA 3WPUA 1OYGA 3WPZA 3OM2A 3WN2A 1W2TA 3VT2A 3PIJA 4N1IA 3NQHA 4FFHA
chains in the Genus database with same CATH topology
3AKGA 3C7HA 3WN1A 4AK5A 5FMCA 5GLKA 2AC1A 5AYCA 4FFFA 1GYEB 2VDTA 4PVAA 3QC2A 2EXJA 3VSRA 1GYHA 4FFIA 4U6DA 3D60A 2X8TA 3QEFA 3R4ZA 2QQUA 2YFSA 4AK6A 5FKCA 3OM6A 2ADDA 2ADEA 5FLWA 4O8NA 4UDKE 4FFGA 5FK8A 3WPVA 2B4WA 1GYDB 1W18A 4O8PA 5C0PA 3D5ZA 4UDGA 4MLGA 5A7VA 5AYEA 3KF3A 3K1UA 3LIGA 3WPYA 5A8DA 3BYJA 3BYKA 5FIXA 5AYDA 1Y9MA 5FKBA 2AEYA 4COTA 3ZXLA 1Y4WA 5GLLA 4PVIA 3U14A 2EXHA 2XQRA 3VT1A 4EQVA 3BYNA 4U6BA 5JOXA 3OM7A 1YRZA 5FMDA 3LIHA 3U75A 3UGHA 2OXBA 5B6SA 3LDKA 5FMBA 4QQSA 3UGGA 4KCBA 4N2ZA 2QQWA 3LV4A 1Y9GA 3TAWA 5A8CA 4UDIA 3AKHA 5JOZA 5FK7A 3QEEA 5B6TA 4UDKA 5JOWA 3LF7A 3WMYA 4ONZA 1Y7BA 4NOVA 5GLMA 3LDRA 2EXIA 4UDJA 1UYPA 5JOYA 2AEZA 1VKDA 1UV4A 5GLOA 5GLQA 3LFIA 3C7OA 3KF5A 3C7FA 3OM5A 5ANNA 3D5YA 3RWKX 5A7VB 3WAUA 2YFTA 3VSZA 4D47A 3LEMA 3PIGA 1PT2A 4KC7A 1YIFA 3OM4A 4AK7A 3R4YA 2EXKA 3WATA 3AKIA 3CU9A 4KC8A 3VSSA 3VT0A 3D61A 3P2NA 3UGFA 3KSTA 2X8FA 4O8OA 3ZXJA 3WN0A 3QZ4A 2QQVA 4N4BA 4KMIA 3SC7X 4KCAA 3R67A 1ST8A 3C2UA 5GLNA 3AKFA 3VSFA 3C7EA 2YFRA 4N2RA 1YI7A 3WMZA 3QEDA 5GLPA 1WL7A 3BYLA 3C7GA 2X8SA 5AY9A 3ZXKA 5GLRA 3WASA 3WPUA 1OYGA 3WPZA 3OM2A 3WN2A 1W2TA 3VT2A 3PIJA 4N1IA 3NQHA 4FFHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AKG A;  3C7H A;  3WN1 A;  4AK5 A;  5FMC A;  5GLK A;  2AC1 A;  5AYC A;  4FFF A;  1GYE B;  2VDT A;  4PVA A;  3QC2 A;  2EXJ A;  3VSR A;  1GYH A;  4FFI A;  4U6D A;  3D60 A;  2X8T A;  3QEF A;  3R4Z A;  2QQU A;  2YFS A;  4AK6 A;  5FKC A;  3OM6 A;  2ADD A;  2ADE A;  5FLW A;  4O8N A;  4UDK E;  4FFG A;  5FK8 A;  3WPV A;  2B4W A;  1GYD B;  1W18 A;  4O8P A;  5C0P A;  3D5Z A;  4UDG A;  4MLG A;  5A7V A;  5AYE A;  3KF3 A;  3K1U A;  3LIG A;  3WPY A;  5A8D A;  3BYJ A;  3BYK A;  5FIX A;  5AYD A;  1Y9M A;  5FKB A;  2AEY A;  4COT A;  3ZXL A;  1Y4W A;  5GLL A;  4PVI A;  3U14 A;  2EXH A;  2XQR A;  3VT1 A;  4EQV A;  3BYN A;  4U6B A;  5JOX A;  3OM7 A;  1YRZ A;  5FMD A;  3LIH A;  3U75 A;  3UGH A;  2OXB A;  5B6S A;  3LDK A;  5FMB A;  4QQS A;  3UGG A;  4KCB A;  4N2Z A;  2QQW A;  3LV4 A;  1Y9G A;  3TAW A;  5A8C A;  4UDI A;  3AKH A;  5JOZ A;  5FK7 A;  3QEE A;  5B6T A;  4UDK A;  5JOW A;  3LF7 A;  3WMY A;  4ONZ A;  1Y7B A;  4NOV A;  5GLM A;  3LDR A;  2EXI A;  4UDJ A;  1UYP A;  5JOY A;  2AEZ A;  1VKD A;  1UV4 A;  5GLO A;  5GLQ A;  3LFI A;  3C7O A;  3KF5 A;  3C7F A;  3OM5 A;  5ANN A;  3D5Y A;  3RWK X;  5A7V B;  3WAU A;  2YFT A;  3VSZ A;  4D47 A;  3LEM A;  3PIG A;  1PT2 A;  4KC7 A;  1YIF A;  3OM4 A;  4AK7 A;  3R4Y A;  2EXK A;  3WAT A;  3AKI A;  3CU9 A;  4KC8 A;  3VSS A;  3VT0 A;  3D61 A;  3P2N A;  3UGF A;  3KST A;  2X8F A;  4O8O A;  3ZXJ A;  3WN0 A;  3QZ4 A;  2QQV A;  4N4B A;  4KMI A;  3SC7 X;  4KCA A;  3R67 A;  1ST8 A;  3C2U A;  5GLN A;  3AKF A;  3VSF A;  3C7E A;  2YFR A;  4N2R A;  1YI7 A;  3WMZ A;  3QED A;  5GLP A;  1WL7 A;  3BYL A;  3C7G A;  2X8S A;  5AY9 A;  3ZXK A;  5GLR A;  3WAS A;  3WPU A;  1OYG A;  3WPZ A;  3OM2 A;  3WN2 A;  1W2T A;  3VT2 A;  3PIJ A;  4N1I A;  3NQH A;  4FFH A; 
#chains in the Genus database with same CATH topology
 3AKG A;  3C7H A;  3WN1 A;  4AK5 A;  5FMC A;  5GLK A;  2AC1 A;  5AYC A;  4FFF A;  1GYE B;  2VDT A;  4PVA A;  3QC2 A;  2EXJ A;  3VSR A;  1GYH A;  4FFI A;  1TL2 A;  4U6D A;  3D60 A;  2X8T A;  3QEF A;  3R4Z A;  2QQU A;  2YFS A;  4AK6 A;  5FKC A;  3OM6 A;  2ADD A;  2ADE A;  5FLW A;  4O8N A;  4UDK E;  4FFG A;  5FK8 A;  3WPV A;  2B4W A;  1GYD B;  1W18 A;  4O8P A;  5C0P A;  3D5Z A;  4UDG A;  4MLG A;  5A7V A;  5AYE A;  3KF3 A;  3K1U A;  3LIG A;  3WPY A;  5A8D A;  3BYJ A;  3BYK A;  5FIX A;  5AYD A;  1Y9M A;  5FKB A;  2AEY A;  4COT A;  3ZXL A;  1Y4W A;  5GLL A;  4PVI A;  3U14 A;  2EXH A;  2XQR A;  3VT1 A;  4EQV A;  3BYN A;  4U6B A;  5JOX A;  3OM7 A;  1YRZ A;  5FMD A;  3LIH A;  3U75 A;  3UGH A;  2OXB A;  5B6S A;  3LDK A;  5FMB A;  4QQS A;  3UGG A;  4KCB A;  4N2Z A;  2QQW A;  3LV4 A;  1Y9G A;  3TAW A;  5A8C A;  4UDI A;  3AKH A;  5JOZ A;  5FK7 A;  3QEE A;  5B6T A;  4UDK A;  5JOW A;  3LF7 A;  3WMY A;  4ONZ A;  1Y7B A;  4NOV A;  5GLM A;  3LDR A;  2EXI A;  4UDJ A;  1UYP A;  5JOY A;  2AEZ A;  1VKD A;  1UV4 A;  5GLO A;  5GLQ A;  3LFI A;  3C7O A;  5C2M A;  3KF5 A;  3C7F A;  3OM5 A;  5ANN A;  3D5Y A;  3RWK X;  5A7V B;  3WAU A;  2YFT A;  3VSZ A;  4D47 A;  3LEM A;  3PIG A;  1PT2 A;  4KC7 A;  1YIF A;  3OM4 A;  4AK7 A;  3R4Y A;  2EXK A;  3WAT A;  3AKI A;  3CU9 A;  4KC8 A;  3VSS A;  3VT0 A;  3D61 A;  3P2N A;  3UGF A;  3KST A;  2X8F A;  4O8O A;  3ZXJ A;  3WN0 A;  3QZ4 A;  2QQV A;  4N4B A;  4KMI A;  3SC7 X;  4KCA A;  3R67 A;  1ST8 A;  3C2U A;  5GLN A;  3AKF A;  3VSF A;  3C7E A;  2YFR A;  4N2R A;  1YI7 A;  3WMZ A;  3QED A;  5GLP A;  1WL7 A;  3BYL A;  3C7G A;  2X8S A;  5AY9 A;  3ZXK A;  5GLR A;  3WAS A;  3WPU A;  1OYG A;  3WPZ A;  3OM2 A;  3WN2 A;  1W2T A;  3VT2 A;  3PIJ A;  4N1I A;  3NQH A;  4FFH A; 
#chains in the Genus database with same CATH homology
 3AKG A;  3C7H A;  3WN1 A;  4AK5 A;  5FMC A;  5GLK A;  2AC1 A;  5AYC A;  4FFF A;  1GYE B;  2VDT A;  4PVA A;  3QC2 A;  2EXJ A;  3VSR A;  1GYH A;  4FFI A;  4U6D A;  3D60 A;  2X8T A;  3QEF A;  3R4Z A;  2QQU A;  2YFS A;  4AK6 A;  5FKC A;  3OM6 A;  2ADD A;  2ADE A;  5FLW A;  4O8N A;  4UDK E;  4FFG A;  5FK8 A;  3WPV A;  2B4W A;  1GYD B;  1W18 A;  4O8P A;  5C0P A;  3D5Z A;  4UDG A;  4MLG A;  5A7V A;  5AYE A;  3KF3 A;  3K1U A;  3LIG A;  3WPY A;  5A8D A;  3BYJ A;  3BYK A;  5FIX A;  5AYD A;  1Y9M A;  5FKB A;  2AEY A;  4COT A;  3ZXL A;  1Y4W A;  5GLL A;  4PVI A;  3U14 A;  2EXH A;  2XQR A;  3VT1 A;  4EQV A;  3BYN A;  4U6B A;  5JOX A;  3OM7 A;  1YRZ A;  5FMD A;  3LIH A;  3U75 A;  3UGH A;  2OXB A;  5B6S A;  3LDK A;  5FMB A;  4QQS A;  3UGG A;  4KCB A;  4N2Z A;  2QQW A;  3LV4 A;  1Y9G A;  3TAW A;  5A8C A;  4UDI A;  3AKH A;  5JOZ A;  5FK7 A;  3QEE A;  5B6T A;  4UDK A;  5JOW A;  3LF7 A;  3WMY A;  4ONZ A;  1Y7B A;  4NOV A;  5GLM A;  3LDR A;  2EXI A;  4UDJ A;  1UYP A;  5JOY A;  2AEZ A;  1VKD A;  1UV4 A;  5GLO A;  5GLQ A;  3LFI A;  3C7O A;  3KF5 A;  3C7F A;  3OM5 A;  5ANN A;  3D5Y A;  3RWK X;  5A7V B;  3WAU A;  2YFT A;  3VSZ A;  4D47 A;  3LEM A;  3PIG A;  1PT2 A;  4KC7 A;  1YIF A;  3OM4 A;  4AK7 A;  3R4Y A;  2EXK A;  3WAT A;  3AKI A;  3CU9 A;  4KC8 A;  3VSS A;  3VT0 A;  3D61 A;  3P2N A;  3UGF A;  3KST A;  2X8F A;  4O8O A;  3ZXJ A;  3WN0 A;  3QZ4 A;  2QQV A;  4N4B A;  4KMI A;  3SC7 X;  4KCA A;  3R67 A;  1ST8 A;  3C2U A;  5GLN A;  3AKF A;  3VSF A;  3C7E A;  2YFR A;  4N2R A;  1YI7 A;  3WMZ A;  3QED A;  5GLP A;  1WL7 A;  3BYL A;  3C7G A;  2X8S A;  5AY9 A;  3ZXK A;  5GLR A;  3WAS A;  3WPU A;  1OYG A;  3WPZ A;  3OM2 A;  3WN2 A;  1W2T A;  3VT2 A;  3PIJ A;  4N1I A;  3NQH A;  4FFH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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