1KGZA

Crystal structure analysis of the anthranilate phosphoribosyltransferase from erwinia carotovora (current name, pectobacterium carotovorum)
Total Genus 94
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
94
sequence length
333
structure length
328
Chain Sequence
b'THQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSAGSCDLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAAR'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Anthranilate phosphoribosyltransferase
publication title The Crystal Structure of Anthranilate Phosphoribosyltransferase from the Enterobacterium Pectobacterium carotovorum
pubmed doi rcsb
source organism Pectobacterium carotovorum
molecule tags Transferase
total genus 94
structure length 328
sequence length 333
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2001-11-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 1kgzA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 1kgzA02
3UU1A 5EP8A 4GIUA 3R88A 2ELCA 4N5VA 4GTNA 4X59A 1VQUA 1O17A 4OWNA 4HKMA 2WK6A 3H5QA 4X5AA 2DSJA 4ZTVA 4ZOFA 2BPQA 4EAFA 4YEKA 4OWUA 1KGZA 4ZOJA 5BYTA 1V8GA 4IJ1A 5BO3A 2TPTA 4X5BA 1ZVWA 3GBRA 4OWSA 5BO2A 1GXBA 4GA4A 4N93A 4GA5A 4N8QA 2GVQA 3TWPA 4MUOA 4GKMA 4X5EA 1ZYKA 4YYYA 3QQSA 4XR5A 1UOUA 5C2LA 4M0RA 4X5DA 4X58A 4YI7A 5C1RA 3QS8A 5C7SA 5BNEA 5EY3A 4OWMA 2WK5A 4LHMA 4X5CA 4GA6A 2J0FA 1ZXYA 4ZOKA 4OWOA 1KHDA 4OWQA 3QR9A 4X46A 4EADA 3QSAA 4OWVA 1BRWA 1AZYA 3R6CA 1OTPA
chains in the Genus database with same CATH superfamily
3UU1A 5EP8A 4GIUA 3R88A 2ELCA 4N5VA 4GTNA 4X59A 1VQUA 1O17A 4OWNA 4HKMA 2WK6A 3H5QA 4X5AA 1RRZA 1RF8B 2DSJA 4ZTVA 4ZOFA 2BPQA 4EAFA 4YEKA 4OWUA 1KGZA 4ZOJA 5BYTA 1V8GA 4IJ1A 5BO3A 2TPTA 4X5BA 1ZVWA 3GBRA 4OWSA 5BO2A 1GXBA 4GA4A 4N93A 4GA5A 4N8QA 2GVQA 3TWPA 4MUOA 4GKMA 4X5EA 1ZYKA 4YYYA 3QQSA 4XR5A 1UOUA 5C2LA 4M0RA 4X5DA 4X58A 4YI7A 5C1RA 3QS8A 5C7SA 5BNEA 5EY3A 4OWMA 2WK5A 4LHMA 4X5CA 4F3FC 4GA6A 2J0FA 1ZXYA 4ZOKA 4OWOA 1KHDA 4OWQA 3QR9A 4X46A 4EADA 3QSAA 4OWVA 1BRWA 1AZYA 3R6CA 1OTPA
chains in the Genus database with same CATH topology
3UU1A 5EP8A 4GIUA 3R88A 2ELCA 4N5VA 4GTNA 4X59A 1VQUA 1O17A 4OWNA 4HKMA 2WK6A 3H5QA 4X5AA 2DSJA 4ZTVA 4ZOFA 2BPQA 4EAFA 4YEKA 4OWUA 1KGZA 4ZOJA 5BYTA 1V8GA 4IJ1A 5BO3A 2TPTA 4X5BA 1ZVWA 3GBRA 4OWSA 5BO2A 1GXBA 4GA4A 4N93A 4GA5A 4N8QA 2GVQA 3TWPA 4MUOA 4GKMA 4X5EA 1ZYKA 4YYYA 3QQSA 4XR5A 1UOUA 5C2LA 4M0RA 4X5DA 4X58A 4YI7A 5C1RA 3QS8A 5C7SA 5BNEA 5EY3A 4OWMA 2WK5A 4LHMA 4X5CA 4GA6A 2J0FA 1ZXYA 4ZOKA 4OWOA 1KHDA 4OWQA 3QR9A 4X46A 4EADA 3QSAA 4OWVA 1BRWA 1AZYA 3R6CA 1OTPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3UU1 A;  5EP8 A;  4GIU A;  3R88 A;  2ELC A;  4N5V A;  4GTN A;  4X59 A;  1VQU A;  1O17 A;  4OWN A;  4HKM A;  2WK6 A;  3H5Q A;  4X5A A;  2DSJ A;  4ZTV A;  4ZOF A;  2BPQ A;  4EAF A;  4YEK A;  4OWU A;  1KGZ A;  4ZOJ A;  5BYT A;  1V8G A;  4IJ1 A;  5BO3 A;  2TPT A;  4X5B A;  1ZVW A;  3GBR A;  4OWS A;  5BO2 A;  1GXB A;  4GA4 A;  4N93 A;  4GA5 A;  4N8Q A;  2GVQ A;  3TWP A;  4MUO A;  4GKM A;  4X5E A;  1ZYK A;  4YYY A;  3QQS A;  4XR5 A;  1UOU A;  5C2L A;  4M0R A;  4X5D A;  4X58 A;  4YI7 A;  5C1R A;  3QS8 A;  5C7S A;  5BNE A;  5EY3 A;  4OWM A;  2WK5 A;  4LHM A;  4X5C A;  4GA6 A;  2J0F A;  1ZXY A;  4ZOK A;  4OWO A;  1KHD A;  4OWQ A;  3QR9 A;  4X46 A;  4EAD A;  3QSA A;  4OWV A;  1BRW A;  1AZY A;  3R6C A;  1OTP A; 
#chains in the Genus database with same CATH topology
 3UU1 A;  5EP8 A;  4GIU A;  3R88 A;  2ELC A;  4N5V A;  4GTN A;  4X59 A;  1VQU A;  1O17 A;  4OWN A;  4HKM A;  2WK6 A;  3H5Q A;  4X5A A;  1RRZ A;  1RF8 B;  2DSJ A;  4ZTV A;  4ZOF A;  2BPQ A;  4EAF A;  4YEK A;  4OWU A;  1KGZ A;  4ZOJ A;  5BYT A;  1V8G A;  4IJ1 A;  5BO3 A;  2TPT A;  4X5B A;  1ZVW A;  3GBR A;  4OWS A;  5BO2 A;  1GXB A;  4GA4 A;  4N93 A;  4GA5 A;  4N8Q A;  2GVQ A;  3TWP A;  4MUO A;  4GKM A;  4X5E A;  1ZYK A;  4YYY A;  3QQS A;  4XR5 A;  1UOU A;  5C2L A;  4M0R A;  4X5D A;  4X58 A;  4YI7 A;  5C1R A;  3QS8 A;  5C7S A;  5BNE A;  5EY3 A;  4OWM A;  2WK5 A;  4LHM A;  4X5C A;  4F3F C;  4GA6 A;  2J0F A;  1ZXY A;  4ZOK A;  4OWO A;  1KHD A;  4OWQ A;  3QR9 A;  4X46 A;  4EAD A;  3QSA A;  4OWV A;  1BRW A;  1AZY A;  3R6C A;  1OTP A; 
#chains in the Genus database with same CATH homology
 3UU1 A;  5EP8 A;  4GIU A;  3R88 A;  2ELC A;  4N5V A;  4GTN A;  4X59 A;  1VQU A;  1O17 A;  4OWN A;  4HKM A;  2WK6 A;  3H5Q A;  4X5A A;  2DSJ A;  4ZTV A;  4ZOF A;  2BPQ A;  4EAF A;  4YEK A;  4OWU A;  1KGZ A;  4ZOJ A;  5BYT A;  1V8G A;  4IJ1 A;  5BO3 A;  2TPT A;  4X5B A;  1ZVW A;  3GBR A;  4OWS A;  5BO2 A;  1GXB A;  4GA4 A;  4N93 A;  4GA5 A;  4N8Q A;  2GVQ A;  3TWP A;  4MUO A;  4GKM A;  4X5E A;  1ZYK A;  4YYY A;  3QQS A;  4XR5 A;  1UOU A;  5C2L A;  4M0R A;  4X5D A;  4X58 A;  4YI7 A;  5C1R A;  3QS8 A;  5C7S A;  5BNE A;  5EY3 A;  4OWM A;  2WK5 A;  4LHM A;  4X5C A;  4GA6 A;  2J0F A;  1ZXY A;  4ZOK A;  4OWO A;  1KHD A;  4OWQ A;  3QR9 A;  4X46 A;  4EAD A;  3QSA A;  4OWV A;  1BRW A;  1AZY A;  3R6C A;  1OTP A; 
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