3R88A

Anthranilate phosphoribosyltransferase (trpd) from mycobacterium tuberculosis (complex with inhibitor acs145)
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
346
structure length
344
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/transferase inhibitor
molecule keywords Anthranilate phosphoribosyltransferase
publication title The Substrate Capture Mechanism of Mycobacterium tuberculosis Anthranilate Phosphoribosyltransferase Provides a Mode for Inhibition.
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 119
structure length 344
sequence length 346
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2011-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 3r88A01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 3r88A02
4X5CA 4N5VA 4N8QA 4ZTVA 2WK6A 4N93A 4OWNA 5C2LA 1ZXYA 4XR5A 1O17A 4ZOJA 1BRWA 4M0RA 5EP8A 3R6CA 3R88A 4HKMA 2J0FA 2GVQA 5BNEA 1V8GA 3QQSA 3QR9A 4MUOA 4X46A 4YI7A 4YYYA 5C7SA 2DSJA 4GA4A 4GIUA 1ZYKA 1OTPA 4OWSA 2BPQA 4ZOFA 4IJ1A 3H5QA 4EAFA 5BO3A 4ZOKA 1KHDA 4EADA 4YEKA 3GBRA 5EY3A 3QSAA 1ZVWA 1VQUA 4X58A 5BYTA 4LHMA 4X5EA 4OWOA 3UU1A 2WK5A 4OWQA 1AZYA 4GA6A 4OWUA 4GTNA 4X5BA 4GKMA 1KGZA 3TWPA 4X59A 1UOUA 4GA5A 5C1RA 4OWVA 3QS8A 2ELCA 4OWMA 1GXBA 5BO2A 4X5AA 4X5DA 2TPTA
chains in the Genus database with same CATH superfamily
4X5CA 4N5VA 4N8QA 4ZTVA 4F3FC 2WK6A 4N93A 4OWNA 5C2LA 1ZXYA 4XR5A 1O17A 4ZOJA 1BRWA 4M0RA 5EP8A 3R6CA 1RRZA 3R88A 4HKMA 2J0FA 2GVQA 1V8GA 5BNEA 3QQSA 3QR9A 4MUOA 4X46A 4YI7A 4YYYA 5C7SA 2DSJA 4GA4A 4GIUA 1ZYKA 1OTPA 4OWSA 2BPQA 4ZOFA 4IJ1A 3H5QA 4EAFA 5BO3A 1RF8B 4ZOKA 1KHDA 4EADA 4YEKA 3GBRA 5EY3A 3QSAA 1ZVWA 1VQUA 4X58A 5BYTA 4LHMA 4X5EA 4OWOA 3UU1A 2WK5A 4OWQA 1AZYA 4GA6A 4OWUA 4GTNA 4X5BA 4GKMA 1KGZA 3TWPA 4X59A 1UOUA 4GA5A 5C1RA 4OWVA 3QS8A 2ELCA 4OWMA 1GXBA 5BO2A 4X5AA 4X5DA 2TPTA
chains in the Genus database with same CATH topology
4X5CA 4N5VA 4N8QA 4ZTVA 2WK6A 4N93A 4OWNA 5C2LA 1ZXYA 4XR5A 1O17A 4ZOJA 1BRWA 4M0RA 5EP8A 3R6CA 3R88A 4HKMA 2J0FA 2GVQA 5BNEA 1V8GA 3QQSA 3QR9A 4MUOA 4X46A 4YI7A 4YYYA 5C7SA 2DSJA 4GA4A 4GIUA 1ZYKA 1OTPA 4OWSA 2BPQA 4ZOFA 4IJ1A 3H5QA 4EAFA 5BO3A 4ZOKA 1KHDA 4EADA 4YEKA 3GBRA 5EY3A 3QSAA 1ZVWA 1VQUA 4X58A 5BYTA 4LHMA 4X5EA 4OWOA 3UU1A 2WK5A 4OWQA 1AZYA 4GA6A 4OWUA 4GTNA 4X5BA 4GKMA 1KGZA 3TWPA 4X59A 1UOUA 4GA5A 5C1RA 4OWVA 3QS8A 2ELCA 4OWMA 1GXBA 5BO2A 4X5AA 4X5DA 2TPTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X5C A;  4N5V A;  4N8Q A;  4ZTV A;  2WK6 A;  4N93 A;  4OWN A;  5C2L A;  1ZXY A;  4XR5 A;  1O17 A;  4ZOJ A;  1BRW A;  4M0R A;  5EP8 A;  3R6C A;  3R88 A;  4HKM A;  2J0F A;  2GVQ A;  5BNE A;  1V8G A;  3QQS A;  3QR9 A;  4MUO A;  4X46 A;  4YI7 A;  4YYY A;  5C7S A;  2DSJ A;  4GA4 A;  4GIU A;  1ZYK A;  1OTP A;  4OWS A;  2BPQ A;  4ZOF A;  4IJ1 A;  3H5Q A;  4EAF A;  5BO3 A;  4ZOK A;  1KHD A;  4EAD A;  4YEK A;  3GBR A;  5EY3 A;  3QSA A;  1ZVW A;  1VQU A;  4X58 A;  5BYT A;  4LHM A;  4X5E A;  4OWO A;  3UU1 A;  2WK5 A;  4OWQ A;  1AZY A;  4GA6 A;  4OWU A;  4GTN A;  4X5B A;  4GKM A;  1KGZ A;  3TWP A;  4X59 A;  1UOU A;  4GA5 A;  5C1R A;  4OWV A;  3QS8 A;  2ELC A;  4OWM A;  1GXB A;  5BO2 A;  4X5A A;  4X5D A;  2TPT A; 
#chains in the Genus database with same CATH topology
 4X5C A;  4N5V A;  4N8Q A;  4ZTV A;  4F3F C;  2WK6 A;  4N93 A;  4OWN A;  5C2L A;  1ZXY A;  4XR5 A;  1O17 A;  4ZOJ A;  1BRW A;  4M0R A;  5EP8 A;  3R6C A;  1RRZ A;  3R88 A;  4HKM A;  2J0F A;  2GVQ A;  1V8G A;  5BNE A;  3QQS A;  3QR9 A;  4MUO A;  4X46 A;  4YI7 A;  4YYY A;  5C7S A;  2DSJ A;  4GA4 A;  4GIU A;  1ZYK A;  1OTP A;  4OWS A;  2BPQ A;  4ZOF A;  4IJ1 A;  3H5Q A;  4EAF A;  5BO3 A;  1RF8 B;  4ZOK A;  1KHD A;  4EAD A;  4YEK A;  3GBR A;  5EY3 A;  3QSA A;  1ZVW A;  1VQU A;  4X58 A;  5BYT A;  4LHM A;  4X5E A;  4OWO A;  3UU1 A;  2WK5 A;  4OWQ A;  1AZY A;  4GA6 A;  4OWU A;  4GTN A;  4X5B A;  4GKM A;  1KGZ A;  3TWP A;  4X59 A;  1UOU A;  4GA5 A;  5C1R A;  4OWV A;  3QS8 A;  2ELC A;  4OWM A;  1GXB A;  5BO2 A;  4X5A A;  4X5D A;  2TPT A; 
#chains in the Genus database with same CATH homology
 4X5C A;  4N5V A;  4N8Q A;  4ZTV A;  2WK6 A;  4N93 A;  4OWN A;  5C2L A;  1ZXY A;  4XR5 A;  1O17 A;  4ZOJ A;  1BRW A;  4M0R A;  5EP8 A;  3R6C A;  3R88 A;  4HKM A;  2J0F A;  2GVQ A;  5BNE A;  1V8G A;  3QQS A;  3QR9 A;  4MUO A;  4X46 A;  4YI7 A;  4YYY A;  5C7S A;  2DSJ A;  4GA4 A;  4GIU A;  1ZYK A;  1OTP A;  4OWS A;  2BPQ A;  4ZOF A;  4IJ1 A;  3H5Q A;  4EAF A;  5BO3 A;  4ZOK A;  1KHD A;  4EAD A;  4YEK A;  3GBR A;  5EY3 A;  3QSA A;  1ZVW A;  1VQU A;  4X58 A;  5BYT A;  4LHM A;  4X5E A;  4OWO A;  3UU1 A;  2WK5 A;  4OWQ A;  1AZY A;  4GA6 A;  4OWU A;  4GTN A;  4X5B A;  4GKM A;  1KGZ A;  3TWP A;  4X59 A;  1UOU A;  4GA5 A;  5C1R A;  4OWV A;  3QS8 A;  2ELC A;  4OWM A;  1GXB A;  5BO2 A;  4X5A A;  4X5D A;  2TPT A; 
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