5C7SA

Prpp complexed with two mn2+ in the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
346
structure length
344
Chain Sequence
VPSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Anthranilate phosphoribosyltransferase
publication title Binding and mimicking of the phosphate-rich substrate, PRPP
rcsb
source organism Mycobacterium tuberculosis
total genus 122
structure length 344
sequence length 346
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2015-06-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 5c7sA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 5c7sA02
4X5CA 3QQSA 2BPQA 3QS8A 4N93A 4IJ1A 1VQUA 4GTNA 4OWUA 1ZXYA 3GBRA 4OWNA 4OWQA 2WK5A 5C1RA 5C7SA 1OTPA 4MUOA 4X46A 2WK6A 2GVQA 4OWSA 3QR9A 1O17A 3R88A 2DSJA 2TPTA 4XR5A 4GA6A 1BRWA 5C2LA 3R6CA 4N8QA 4X5BA 1KGZA 4ZOJA 4GKMA 2ELCA 4ZOKA 1GXBA 4N5VA 4GA5A 4GIUA 1UOUA 4X5AA 4X58A 4OWMA 4HKMA 4X5DA 1ZVWA 3UU1A 4OWOA 4YI7A 4YEKA 5BO2A 3QSAA 4OWVA 5EP8A 5BYTA 1ZYKA 5EY3A 1KHDA 4ZTVA 5BO3A 4X59A 4ZOFA 4X5EA 1V8GA 5BNEA 4LHMA 4GA4A 4EAFA 2J0FA 4EADA 3H5QA 4M0RA 1AZYA 4YYYA 3TWPA
chains in the Genus database with same CATH superfamily
4X5CA 3QQSA 2BPQA 3QS8A 4N93A 4IJ1A 1VQUA 4GTNA 4OWUA 1ZXYA 3GBRA 4OWNA 4OWQA 2WK5A 5C1RA 5C7SA 1OTPA 4MUOA 4X46A 2WK6A 4F3FC 2GVQA 4OWSA 3QR9A 1O17A 3R88A 2DSJA 2TPTA 4XR5A 1RRZA 4GA6A 1BRWA 5C2LA 3R6CA 4N8QA 4X5BA 1KGZA 4ZOJA 4GKMA 2ELCA 4ZOKA 1GXBA 4N5VA 4GA5A 4GIUA 1UOUA 4X5AA 4X58A 4OWMA 4HKMA 4X5DA 1ZVWA 3UU1A 4OWOA 4YI7A 4YEKA 5BO2A 3QSAA 4OWVA 5EP8A 5BYTA 1ZYKA 1RF8B 5EY3A 1KHDA 4ZTVA 5BO3A 4X59A 4ZOFA 4X5EA 1V8GA 5BNEA 4LHMA 4GA4A 4EAFA 2J0FA 4EADA 3H5QA 4M0RA 1AZYA 4YYYA 3TWPA
chains in the Genus database with same CATH topology
4X5CA 3QQSA 2BPQA 3QS8A 4N93A 4IJ1A 1VQUA 4GTNA 4OWUA 1ZXYA 3GBRA 4OWNA 4OWQA 2WK5A 5C1RA 5C7SA 1OTPA 4MUOA 4X46A 2WK6A 2GVQA 4OWSA 3QR9A 1O17A 3R88A 2DSJA 2TPTA 4XR5A 4GA6A 1BRWA 5C2LA 3R6CA 4N8QA 4X5BA 1KGZA 4ZOJA 4GKMA 2ELCA 4ZOKA 1GXBA 4N5VA 4GA5A 4GIUA 1UOUA 4X5AA 4X58A 4OWMA 4HKMA 4X5DA 1ZVWA 3UU1A 4OWOA 4YI7A 4YEKA 5BO2A 3QSAA 4OWVA 5EP8A 5BYTA 1ZYKA 5EY3A 1KHDA 4ZTVA 5BO3A 4X59A 4ZOFA 4X5EA 1V8GA 5BNEA 4LHMA 4GA4A 4EAFA 2J0FA 4EADA 3H5QA 4M0RA 1AZYA 4YYYA 3TWPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X5C A;  3QQS A;  2BPQ A;  3QS8 A;  4N93 A;  4IJ1 A;  1VQU A;  4GTN A;  4OWU A;  1ZXY A;  3GBR A;  4OWN A;  4OWQ A;  2WK5 A;  5C1R A;  5C7S A;  1OTP A;  4MUO A;  4X46 A;  2WK6 A;  2GVQ A;  4OWS A;  3QR9 A;  1O17 A;  3R88 A;  2DSJ A;  2TPT A;  4XR5 A;  4GA6 A;  1BRW A;  5C2L A;  3R6C A;  4N8Q A;  4X5B A;  1KGZ A;  4ZOJ A;  4GKM A;  2ELC A;  4ZOK A;  1GXB A;  4N5V A;  4GA5 A;  4GIU A;  1UOU A;  4X5A A;  4X58 A;  4OWM A;  4HKM A;  4X5D A;  1ZVW A;  3UU1 A;  4OWO A;  4YI7 A;  4YEK A;  5BO2 A;  3QSA A;  4OWV A;  5EP8 A;  5BYT A;  1ZYK A;  5EY3 A;  1KHD A;  4ZTV A;  5BO3 A;  4X59 A;  4ZOF A;  4X5E A;  1V8G A;  5BNE A;  4LHM A;  4GA4 A;  4EAF A;  2J0F A;  4EAD A;  3H5Q A;  4M0R A;  1AZY A;  4YYY A;  3TWP A; 
#chains in the Genus database with same CATH topology
 4X5C A;  3QQS A;  2BPQ A;  3QS8 A;  4N93 A;  4IJ1 A;  1VQU A;  4GTN A;  4OWU A;  1ZXY A;  3GBR A;  4OWN A;  4OWQ A;  2WK5 A;  5C1R A;  5C7S A;  1OTP A;  4MUO A;  4X46 A;  2WK6 A;  4F3F C;  2GVQ A;  4OWS A;  3QR9 A;  1O17 A;  3R88 A;  2DSJ A;  2TPT A;  4XR5 A;  1RRZ A;  4GA6 A;  1BRW A;  5C2L A;  3R6C A;  4N8Q A;  4X5B A;  1KGZ A;  4ZOJ A;  4GKM A;  2ELC A;  4ZOK A;  1GXB A;  4N5V A;  4GA5 A;  4GIU A;  1UOU A;  4X5A A;  4X58 A;  4OWM A;  4HKM A;  4X5D A;  1ZVW A;  3UU1 A;  4OWO A;  4YI7 A;  4YEK A;  5BO2 A;  3QSA A;  4OWV A;  5EP8 A;  5BYT A;  1ZYK A;  1RF8 B;  5EY3 A;  1KHD A;  4ZTV A;  5BO3 A;  4X59 A;  4ZOF A;  4X5E A;  1V8G A;  5BNE A;  4LHM A;  4GA4 A;  4EAF A;  2J0F A;  4EAD A;  3H5Q A;  4M0R A;  1AZY A;  4YYY A;  3TWP A; 
#chains in the Genus database with same CATH homology
 4X5C A;  3QQS A;  2BPQ A;  3QS8 A;  4N93 A;  4IJ1 A;  1VQU A;  4GTN A;  4OWU A;  1ZXY A;  3GBR A;  4OWN A;  4OWQ A;  2WK5 A;  5C1R A;  5C7S A;  1OTP A;  4MUO A;  4X46 A;  2WK6 A;  2GVQ A;  4OWS A;  3QR9 A;  1O17 A;  3R88 A;  2DSJ A;  2TPT A;  4XR5 A;  4GA6 A;  1BRW A;  5C2L A;  3R6C A;  4N8Q A;  4X5B A;  1KGZ A;  4ZOJ A;  4GKM A;  2ELC A;  4ZOK A;  1GXB A;  4N5V A;  4GA5 A;  4GIU A;  1UOU A;  4X5A A;  4X58 A;  4OWM A;  4HKM A;  4X5D A;  1ZVW A;  3UU1 A;  4OWO A;  4YI7 A;  4YEK A;  5BO2 A;  3QSA A;  4OWV A;  5EP8 A;  5BYT A;  1ZYK A;  5EY3 A;  1KHD A;  4ZTV A;  5BO3 A;  4X59 A;  4ZOF A;  4X5E A;  1V8G A;  5BNE A;  4LHM A;  4GA4 A;  4EAF A;  2J0F A;  4EAD A;  3H5Q A;  4M0R A;  1AZY A;  4YYY A;  3TWP A; 
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