1O17A

Anthranilate phosphoribosyl-transferase (trpd)
Total Genus 123

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
123
sequence length
343
structure length
339
Chain Sequence
MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGGLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKS
5010015020025030030025020015010050
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (3-12)AH2 (18-30)AH4 (52-65)3H1 (155-160)AH3 (35-48)AH9 (161-167)TIV3 (174-177)TI1 (71-74)3H3 (177-179)AH5 (90-99)S1 (75-76)TI2 (99-102)TI3 (181-184)3H5 (258-260)EMPTYO1 (88-90)TVIa1 (218-221)AH6 (118-125)S2 (104-108)TIV1 (111-114)TIV2 (113-116)AH7 (133-143)TVIII1 (128-131)AH13 (305-329)AH8 (150-154)S3 (145-149)AH10 (195-206)TVIII2 (210-213)S5 (212-218)S4 (187-191)S6 (230-237)AH12 (282-299)TIV4 (206-209)TIV5 (219-222)TIV6 (226-229)S7 (240-247)TI4 (237-240)3H4 (248-251)AH11 (266-278)TIV8 (300-303)AH14 (333-340)TIV7 (279-282)3H2 (172-174)Updating...
connected with : NaN
publication title Structural analysis of two enzymes catalysing reverse metabolic reactions implies common ancestry
pubmed doi rcsb
molecule keywords ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
molecule tags Transferase
source organism Sulfolobus solfataricus
total genus 123
structure length 339
sequence length 343
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2002-10-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 1o17A01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 1o17A02
4X58A 5EY3A 2ELCA 3QSAA 3H5QA 4X5DA 4OWOA 4YEKA 2WK5A 1KHDA 1O17A 4IJ1A 4OWMA 5EP8A 4XR5A 3TWPA 4GIUA 2J0FA 4ZOKA 2BPQA 4X59A 4N8QA 1ZVWA 3R6CA 1V8GA 3QQSA 5BNEA 4OWNA 1KGZA 4ZOJA 4X5CA 4X46A 1ZYKA 1VQUA 4X5EA 2TPTA 4X5AA 4ZOFA 5C2LA 4HKMA 1OTPA 4EAFA 4YYYA 4OWSA 2DSJA 4ZTVA 3GBRA 5C7SA 1GXBA 4GTNA 2WK6A 5C1RA 4OWUA 3QR9A 4M0RA 3QS8A 4EADA 1UOUA 4LHMA 3R88A 5BO2A 2GVQA 4OWVA 1BRWA 4GA5A 3UU1A 4N5VA 4GKMA 4MUOA 5BO3A 5BYTA 4OWQA 1AZYA 4N93A 4YI7A 1ZXYA 4GA6A 4GA4A 4X5BA
chains in the Genus database with same CATH superfamily
4X58A 5EY3A 2ELCA 3QSAA 3H5QA 1RRZA 4X5DA 4OWOA 4YEKA 2WK5A 1KHDA 1O17A 4IJ1A 4OWMA 5EP8A 4XR5A 3TWPA 4GIUA 2J0FA 4ZOKA 2BPQA 4X59A 4N8QA 1ZVWA 3R6CA 1V8GA 3QQSA 4F3FC 5BNEA 4OWNA 1KGZA 4ZOJA 4X5CA 4X46A 1ZYKA 1VQUA 4X5EA 2TPTA 4X5AA 4ZOFA 5C2LA 4HKMA 1OTPA 4EAFA 1RF8B 4YYYA 4OWSA 2DSJA 4ZTVA 3GBRA 5C7SA 1GXBA 4GTNA 2WK6A 5C1RA 4OWUA 3QR9A 4M0RA 3QS8A 4EADA 1UOUA 4LHMA 3R88A 5BO2A 2GVQA 4OWVA 1BRWA 4GA5A 3UU1A 4N5VA 4GKMA 4MUOA 5BO3A 5BYTA 4OWQA 1AZYA 4N93A 4YI7A 1ZXYA 4GA6A 4GA4A 4X5BA
chains in the Genus database with same CATH topology
4X58A 5EY3A 2ELCA 3QSAA 3H5QA 4X5DA 4OWOA 4YEKA 2WK5A 1KHDA 1O17A 4IJ1A 4OWMA 5EP8A 4XR5A 3TWPA 4GIUA 2J0FA 4ZOKA 2BPQA 4X59A 4N8QA 1ZVWA 3R6CA 1V8GA 3QQSA 5BNEA 4OWNA 1KGZA 4ZOJA 4X5CA 4X46A 1ZYKA 1VQUA 4X5EA 2TPTA 4X5AA 4ZOFA 5C2LA 4HKMA 1OTPA 4EAFA 4YYYA 4OWSA 2DSJA 4ZTVA 3GBRA 5C7SA 1GXBA 4GTNA 2WK6A 5C1RA 4OWUA 3QR9A 4M0RA 3QS8A 4EADA 1UOUA 4LHMA 3R88A 5BO2A 2GVQA 4OWVA 1BRWA 4GA5A 3UU1A 4N5VA 4GKMA 4MUOA 5BO3A 5BYTA 4OWQA 1AZYA 4N93A 4YI7A 1ZXYA 4GA6A 4GA4A 4X5BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X58 A;  5EY3 A;  2ELC A;  3QSA A;  3H5Q A;  4X5D A;  4OWO A;  4YEK A;  2WK5 A;  1KHD A;  1O17 A;  4IJ1 A;  4OWM A;  5EP8 A;  4XR5 A;  3TWP A;  4GIU A;  2J0F A;  4ZOK A;  2BPQ A;  4X59 A;  4N8Q A;  1ZVW A;  3R6C A;  1V8G A;  3QQS A;  5BNE A;  4OWN A;  1KGZ A;  4ZOJ A;  4X5C A;  4X46 A;  1ZYK A;  1VQU A;  4X5E A;  2TPT A;  4X5A A;  4ZOF A;  5C2L A;  4HKM A;  1OTP A;  4EAF A;  4YYY A;  4OWS A;  2DSJ A;  4ZTV A;  3GBR A;  5C7S A;  1GXB A;  4GTN A;  2WK6 A;  5C1R A;  4OWU A;  3QR9 A;  4M0R A;  3QS8 A;  4EAD A;  1UOU A;  4LHM A;  3R88 A;  5BO2 A;  2GVQ A;  4OWV A;  1BRW A;  4GA5 A;  3UU1 A;  4N5V A;  4GKM A;  4MUO A;  5BO3 A;  5BYT A;  4OWQ A;  1AZY A;  4N93 A;  4YI7 A;  1ZXY A;  4GA6 A;  4GA4 A;  4X5B A; 
#chains in the Genus database with same CATH topology
 4X58 A;  5EY3 A;  2ELC A;  3QSA A;  3H5Q A;  1RRZ A;  4X5D A;  4OWO A;  4YEK A;  2WK5 A;  1KHD A;  1O17 A;  4IJ1 A;  4OWM A;  5EP8 A;  4XR5 A;  3TWP A;  4GIU A;  2J0F A;  4ZOK A;  2BPQ A;  4X59 A;  4N8Q A;  1ZVW A;  3R6C A;  1V8G A;  3QQS A;  4F3F C;  5BNE A;  4OWN A;  1KGZ A;  4ZOJ A;  4X5C A;  4X46 A;  1ZYK A;  1VQU A;  4X5E A;  2TPT A;  4X5A A;  4ZOF A;  5C2L A;  4HKM A;  1OTP A;  4EAF A;  1RF8 B;  4YYY A;  4OWS A;  2DSJ A;  4ZTV A;  3GBR A;  5C7S A;  1GXB A;  4GTN A;  2WK6 A;  5C1R A;  4OWU A;  3QR9 A;  4M0R A;  3QS8 A;  4EAD A;  1UOU A;  4LHM A;  3R88 A;  5BO2 A;  2GVQ A;  4OWV A;  1BRW A;  4GA5 A;  3UU1 A;  4N5V A;  4GKM A;  4MUO A;  5BO3 A;  5BYT A;  4OWQ A;  1AZY A;  4N93 A;  4YI7 A;  1ZXY A;  4GA6 A;  4GA4 A;  4X5B A; 
#chains in the Genus database with same CATH homology
 4X58 A;  5EY3 A;  2ELC A;  3QSA A;  3H5Q A;  4X5D A;  4OWO A;  4YEK A;  2WK5 A;  1KHD A;  1O17 A;  4IJ1 A;  4OWM A;  5EP8 A;  4XR5 A;  3TWP A;  4GIU A;  2J0F A;  4ZOK A;  2BPQ A;  4X59 A;  4N8Q A;  1ZVW A;  3R6C A;  1V8G A;  3QQS A;  5BNE A;  4OWN A;  1KGZ A;  4ZOJ A;  4X5C A;  4X46 A;  1ZYK A;  1VQU A;  4X5E A;  2TPT A;  4X5A A;  4ZOF A;  5C2L A;  4HKM A;  1OTP A;  4EAF A;  4YYY A;  4OWS A;  2DSJ A;  4ZTV A;  3GBR A;  5C7S A;  1GXB A;  4GTN A;  2WK6 A;  5C1R A;  4OWU A;  3QR9 A;  4M0R A;  3QS8 A;  4EAD A;  1UOU A;  4LHM A;  3R88 A;  5BO2 A;  2GVQ A;  4OWV A;  1BRW A;  4GA5 A;  3UU1 A;  4N5V A;  4GKM A;  4MUO A;  5BO3 A;  5BYT A;  4OWQ A;  1AZY A;  4N93 A;  4YI7 A;  1ZXY A;  4GA6 A;  4GA4 A;  4X5B A; 
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