4GTNA

Structure of anthranilate phosphoribosyl transferase from acinetobacter baylyi
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
349
structure length
337
Chain Sequence
PALRANIQQALNHITKNIHLTQAQMEDVMRSIMQGNATEAQIGALMMGLRMKGESIDEITAAARVMRELAIKIDVSDIQYLVDIVGTGGDGQNLFNVSTASSFVIAAAGATIAKHGNSSDLLEQAGINLDLDMQQTERCIREMGVGFLFAPKAMKYAVGPRELGIRSIFNLLGPLTNPAGVKRFVIGVFSDELCRPIAEVMKQLGAEHVMVVHSKDGLDEISLASQTYIAELKNGEVTEWVLNPEDVNIPSQTLSGLIVEDSNASLKLIKDALGRKKSDIGEKAANMIALNAGAGIYVSGLATSYKQGVALAHDIIYGGQALEKMSILSEFTKALKE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of anthranilate phosphoribosyl transferase from acinetobacter baylyi
rcsb
molecule tags Transferase
source organism Acinetobacter
molecule keywords Anthranilate phosphoribosyltransferase
total genus 117
structure length 337
sequence length 349
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2012-08-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4gtnA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4gtnA02
3GBRA 4OWMA 4OWUA 4GA4A 3R6CA 1UOUA 1VQUA 4ZOKA 4M0RA 4X5BA 1KHDA 4YI7A 5BO3A 4HKMA 4YYYA 5BYTA 5EP8A 5C7SA 1ZXYA 3QSAA 1O17A 4X59A 5C2LA 4LHMA 4OWQA 4GTNA 1V8GA 2ELCA 4OWSA 3TWPA 2WK6A 2J0FA 4IJ1A 4MUOA 1ZVWA 1ZYKA 2BPQA 3QS8A 4X46A 2TPTA 4ZOJA 1BRWA 4GA6A 5C1RA 5EY3A 4GA5A 1AZYA 3QQSA 4N5VA 1GXBA 2GVQA 4GKMA 1KGZA 4GIUA 4XR5A 4X5EA 2WK5A 4N8QA 1OTPA 4OWOA 4EAFA 4ZOFA 3R88A 2DSJA 4X5AA 4ZTVA 4X5CA 3H5QA 5BO2A 4OWNA 4OWVA 4N93A 4X5DA 3QR9A 5BNEA 4EADA 4YEKA 4X58A 3UU1A
chains in the Genus database with same CATH superfamily
3GBRA 4OWMA 4OWUA 4GA4A 3R6CA 1UOUA 1VQUA 4ZOKA 4M0RA 4X5BA 1KHDA 4YI7A 5BO3A 4HKMA 4YYYA 5BYTA 5EP8A 5C7SA 1RRZA 1ZXYA 3QSAA 1O17A 4X59A 5C2LA 4LHMA 1RF8B 4OWQA 4GTNA 1V8GA 2ELCA 4OWSA 3TWPA 2WK6A 2J0FA 4F3FC 4IJ1A 4MUOA 1ZVWA 1ZYKA 2BPQA 3QS8A 4X46A 2TPTA 4ZOJA 1BRWA 4GA6A 5C1RA 5EY3A 4GA5A 1AZYA 3QQSA 4N5VA 1GXBA 2GVQA 4GKMA 1KGZA 4GIUA 4XR5A 4X5EA 2WK5A 4N8QA 1OTPA 4OWOA 4EAFA 4ZOFA 3R88A 2DSJA 4X5AA 4ZTVA 4X5CA 3H5QA 5BO2A 4OWNA 4OWVA 4N93A 4X5DA 3QR9A 5BNEA 4EADA 4YEKA 4X58A 3UU1A
chains in the Genus database with same CATH topology
3GBRA 4OWMA 4OWUA 4GA4A 3R6CA 1UOUA 1VQUA 4ZOKA 4M0RA 4X5BA 1KHDA 4YI7A 5BO3A 4HKMA 4YYYA 5BYTA 5EP8A 5C7SA 1ZXYA 3QSAA 1O17A 4X59A 5C2LA 4LHMA 4OWQA 4GTNA 1V8GA 2ELCA 4OWSA 3TWPA 2WK6A 2J0FA 4IJ1A 4MUOA 1ZVWA 1ZYKA 2BPQA 3QS8A 4X46A 2TPTA 4ZOJA 1BRWA 4GA6A 5C1RA 5EY3A 4GA5A 1AZYA 3QQSA 4N5VA 1GXBA 2GVQA 4GKMA 1KGZA 4GIUA 4XR5A 4X5EA 2WK5A 4N8QA 1OTPA 4OWOA 4EAFA 4ZOFA 3R88A 2DSJA 4X5AA 4ZTVA 4X5CA 3H5QA 5BO2A 4OWNA 4OWVA 4N93A 4X5DA 3QR9A 5BNEA 4EADA 4YEKA 4X58A 3UU1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GBR A;  4OWM A;  4OWU A;  4GA4 A;  3R6C A;  1UOU A;  1VQU A;  4ZOK A;  4M0R A;  4X5B A;  1KHD A;  4YI7 A;  5BO3 A;  4HKM A;  4YYY A;  5BYT A;  5EP8 A;  5C7S A;  1ZXY A;  3QSA A;  1O17 A;  4X59 A;  5C2L A;  4LHM A;  4OWQ A;  4GTN A;  1V8G A;  2ELC A;  4OWS A;  3TWP A;  2WK6 A;  2J0F A;  4IJ1 A;  4MUO A;  1ZVW A;  1ZYK A;  2BPQ A;  3QS8 A;  4X46 A;  2TPT A;  4ZOJ A;  1BRW A;  4GA6 A;  5C1R A;  5EY3 A;  4GA5 A;  1AZY A;  3QQS A;  4N5V A;  1GXB A;  2GVQ A;  4GKM A;  1KGZ A;  4GIU A;  4XR5 A;  4X5E A;  2WK5 A;  4N8Q A;  1OTP A;  4OWO A;  4EAF A;  4ZOF A;  3R88 A;  2DSJ A;  4X5A A;  4ZTV A;  4X5C A;  3H5Q A;  5BO2 A;  4OWN A;  4OWV A;  4N93 A;  4X5D A;  3QR9 A;  5BNE A;  4EAD A;  4YEK A;  4X58 A;  3UU1 A; 
#chains in the Genus database with same CATH topology
 3GBR A;  4OWM A;  4OWU A;  4GA4 A;  3R6C A;  1UOU A;  1VQU A;  4ZOK A;  4M0R A;  4X5B A;  1KHD A;  4YI7 A;  5BO3 A;  4HKM A;  4YYY A;  5BYT A;  5EP8 A;  5C7S A;  1RRZ A;  1ZXY A;  3QSA A;  1O17 A;  4X59 A;  5C2L A;  4LHM A;  1RF8 B;  4OWQ A;  4GTN A;  1V8G A;  2ELC A;  4OWS A;  3TWP A;  2WK6 A;  2J0F A;  4F3F C;  4IJ1 A;  4MUO A;  1ZVW A;  1ZYK A;  2BPQ A;  3QS8 A;  4X46 A;  2TPT A;  4ZOJ A;  1BRW A;  4GA6 A;  5C1R A;  5EY3 A;  4GA5 A;  1AZY A;  3QQS A;  4N5V A;  1GXB A;  2GVQ A;  4GKM A;  1KGZ A;  4GIU A;  4XR5 A;  4X5E A;  2WK5 A;  4N8Q A;  1OTP A;  4OWO A;  4EAF A;  4ZOF A;  3R88 A;  2DSJ A;  4X5A A;  4ZTV A;  4X5C A;  3H5Q A;  5BO2 A;  4OWN A;  4OWV A;  4N93 A;  4X5D A;  3QR9 A;  5BNE A;  4EAD A;  4YEK A;  4X58 A;  3UU1 A; 
#chains in the Genus database with same CATH homology
 3GBR A;  4OWM A;  4OWU A;  4GA4 A;  3R6C A;  1UOU A;  1VQU A;  4ZOK A;  4M0R A;  4X5B A;  1KHD A;  4YI7 A;  5BO3 A;  4HKM A;  4YYY A;  5BYT A;  5EP8 A;  5C7S A;  1ZXY A;  3QSA A;  1O17 A;  4X59 A;  5C2L A;  4LHM A;  4OWQ A;  4GTN A;  1V8G A;  2ELC A;  4OWS A;  3TWP A;  2WK6 A;  2J0F A;  4IJ1 A;  4MUO A;  1ZVW A;  1ZYK A;  2BPQ A;  3QS8 A;  4X46 A;  2TPT A;  4ZOJ A;  1BRW A;  4GA6 A;  5C1R A;  5EY3 A;  4GA5 A;  1AZY A;  3QQS A;  4N5V A;  1GXB A;  2GVQ A;  4GKM A;  1KGZ A;  4GIU A;  4XR5 A;  4X5E A;  2WK5 A;  4N8Q A;  1OTP A;  4OWO A;  4EAF A;  4ZOF A;  3R88 A;  2DSJ A;  4X5A A;  4ZTV A;  4X5C A;  3H5Q A;  5BO2 A;  4OWN A;  4OWV A;  4N93 A;  4X5D A;  3QR9 A;  5BNE A;  4EAD A;  4YEK A;  4X58 A;  3UU1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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