4IJ1A

Bianthranilate-like analogue bound to anthranilate phosphoribosyltransferase (anprt; trpd) in absence of substrates.
Total Genus 117

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
346
structure length
334
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGTVNLSTMAAIVVAAAGVPVVKHGNRAADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI
5010015020025030030025020015010050
020406080100Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH2 (44-54)AH7 (162-172)AH3 (59-72)AH6 (148-154)AH4 (76-89)S3 (174-178)AH9 (187-196)TIV2 (254-257)EMPTYTI1 (99-102)S1 (103-107)AH12 (311-329)AH5 (116-129)TIV1 (138-148)S2 (133-137)3H2 (201-204)AH8 (179-183)3H1 (184-186)3H3 (206-208)TI2 (210-213)AH10 (224-237)S4 (216-220)S5 (240-246)AH11 (294-306)3H4 (276-279)O1 (196-198)TI3 (246-249)S6 (259-265)TIV3 (264-267)S7 (268-274)TIV4 (329-332)AH1 (27-36)TII1 (41-44)TII2 (94-97)3H5 (286-289)Updating...
connected with : NaN
publication title Repurposing the Chemical Scaffold of the Anti-Arthritic Drug Lobenzarit to Target Tryptophan Biosynthesis in Mycobacterium tuberculosis.
pubmed doi rcsb
molecule keywords Anthranilate phosphoribosyltransferase
molecule tags Transferase/transferase inhibitor
source organism Mycobacterium tuberculosis
total genus 117
structure length 334
sequence length 346
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2012-12-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4ij1A01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4ij1A02
5C7SA 4N93A 4N8QA 4OWOA 4ZOKA 4GTNA 2J0FA 3QR9A 4ZOJA 5EP8A 4X46A 1GXBA 4X5DA 4X5EA 1VQUA 1UOUA 4M0RA 4EADA 4GIUA 4OWMA 4GA6A 2TPTA 4X58A 1ZVWA 1BRWA 4OWSA 5BO3A 4YYYA 2WK6A 4GA5A 2GVQA 4GA4A 3QS8A 4HKMA 4OWUA 5C2LA 5BNEA 4OWNA 1V8GA 1ZXYA 4YI7A 4LHMA 1O17A 4OWQA 4X5BA 4ZOFA 4N5VA 5BO2A 3UU1A 4X5CA 5EY3A 4YEKA 3R6CA 5C1RA 2DSJA 3TWPA 3QQSA 3GBRA 1OTPA 4X59A 1KHDA 2WK5A 4OWVA 2BPQA 1AZYA 4MUOA 1KGZA 5BYTA 4X5AA 3H5QA 4ZTVA 1ZYKA 4EAFA 4IJ1A 3R88A 4XR5A 4GKMA 2ELCA 3QSAA
chains in the Genus database with same CATH superfamily
5C7SA 4N93A 4N8QA 4OWOA 4ZOKA 4GTNA 2J0FA 3QR9A 4ZOJA 5EP8A 4X46A 1GXBA 4X5DA 4X5EA 1VQUA 1UOUA 4M0RA 4EADA 4GIUA 4OWMA 4GA6A 2TPTA 4X58A 1ZVWA 1BRWA 4OWSA 1RRZA 5BO3A 4YYYA 2WK6A 4GA5A 2GVQA 4GA4A 3QS8A 4HKMA 4OWUA 5C2LA 5BNEA 4OWNA 1V8GA 1ZXYA 4YI7A 4LHMA 1O17A 4OWQA 4X5BA 4ZOFA 4N5VA 5BO2A 3UU1A 4X5CA 5EY3A 4YEKA 3R6CA 5C1RA 2DSJA 3TWPA 1RF8B 3QQSA 3GBRA 1OTPA 4X59A 1KHDA 2WK5A 4OWVA 2BPQA 1AZYA 4MUOA 1KGZA 5BYTA 4X5AA 3H5QA 4ZTVA 1ZYKA 4EAFA 4IJ1A 3R88A 4XR5A 4F3FC 4GKMA 2ELCA 3QSAA
chains in the Genus database with same CATH topology
5C7SA 4N93A 4N8QA 4OWOA 4ZOKA 4GTNA 2J0FA 3QR9A 4ZOJA 5EP8A 4X46A 1GXBA 4X5DA 4X5EA 1VQUA 1UOUA 4M0RA 4EADA 4GIUA 4OWMA 4GA6A 2TPTA 4X58A 1ZVWA 1BRWA 4OWSA 5BO3A 4YYYA 2WK6A 4GA5A 2GVQA 4GA4A 3QS8A 4HKMA 4OWUA 5C2LA 5BNEA 4OWNA 1V8GA 1ZXYA 4YI7A 4LHMA 1O17A 4OWQA 4X5BA 4ZOFA 4N5VA 5BO2A 3UU1A 4X5CA 5EY3A 4YEKA 3R6CA 5C1RA 2DSJA 3TWPA 3QQSA 3GBRA 1OTPA 4X59A 1KHDA 2WK5A 4OWVA 2BPQA 1AZYA 4MUOA 1KGZA 5BYTA 4X5AA 3H5QA 4ZTVA 1ZYKA 4EAFA 4IJ1A 3R88A 4XR5A 4GKMA 2ELCA 3QSAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C7S A;  4N93 A;  4N8Q A;  4OWO A;  4ZOK A;  4GTN A;  2J0F A;  3QR9 A;  4ZOJ A;  5EP8 A;  4X46 A;  1GXB A;  4X5D A;  4X5E A;  1VQU A;  1UOU A;  4M0R A;  4EAD A;  4GIU A;  4OWM A;  4GA6 A;  2TPT A;  4X58 A;  1ZVW A;  1BRW A;  4OWS A;  5BO3 A;  4YYY A;  2WK6 A;  4GA5 A;  2GVQ A;  4GA4 A;  3QS8 A;  4HKM A;  4OWU A;  5C2L A;  5BNE A;  4OWN A;  1V8G A;  1ZXY A;  4YI7 A;  4LHM A;  1O17 A;  4OWQ A;  4X5B A;  4ZOF A;  4N5V A;  5BO2 A;  3UU1 A;  4X5C A;  5EY3 A;  4YEK A;  3R6C A;  5C1R A;  2DSJ A;  3TWP A;  3QQS A;  3GBR A;  1OTP A;  4X59 A;  1KHD A;  2WK5 A;  4OWV A;  2BPQ A;  1AZY A;  4MUO A;  1KGZ A;  5BYT A;  4X5A A;  3H5Q A;  4ZTV A;  1ZYK A;  4EAF A;  4IJ1 A;  3R88 A;  4XR5 A;  4GKM A;  2ELC A;  3QSA A; 
#chains in the Genus database with same CATH topology
 5C7S A;  4N93 A;  4N8Q A;  4OWO A;  4ZOK A;  4GTN A;  2J0F A;  3QR9 A;  4ZOJ A;  5EP8 A;  4X46 A;  1GXB A;  4X5D A;  4X5E A;  1VQU A;  1UOU A;  4M0R A;  4EAD A;  4GIU A;  4OWM A;  4GA6 A;  2TPT A;  4X58 A;  1ZVW A;  1BRW A;  4OWS A;  1RRZ A;  5BO3 A;  4YYY A;  2WK6 A;  4GA5 A;  2GVQ A;  4GA4 A;  3QS8 A;  4HKM A;  4OWU A;  5C2L A;  5BNE A;  4OWN A;  1V8G A;  1ZXY A;  4YI7 A;  4LHM A;  1O17 A;  4OWQ A;  4X5B A;  4ZOF A;  4N5V A;  5BO2 A;  3UU1 A;  4X5C A;  5EY3 A;  4YEK A;  3R6C A;  5C1R A;  2DSJ A;  3TWP A;  1RF8 B;  3QQS A;  3GBR A;  1OTP A;  4X59 A;  1KHD A;  2WK5 A;  4OWV A;  2BPQ A;  1AZY A;  4MUO A;  1KGZ A;  5BYT A;  4X5A A;  3H5Q A;  4ZTV A;  1ZYK A;  4EAF A;  4IJ1 A;  3R88 A;  4XR5 A;  4F3F C;  4GKM A;  2ELC A;  3QSA A; 
#chains in the Genus database with same CATH homology
 5C7S A;  4N93 A;  4N8Q A;  4OWO A;  4ZOK A;  4GTN A;  2J0F A;  3QR9 A;  4ZOJ A;  5EP8 A;  4X46 A;  1GXB A;  4X5D A;  4X5E A;  1VQU A;  1UOU A;  4M0R A;  4EAD A;  4GIU A;  4OWM A;  4GA6 A;  2TPT A;  4X58 A;  1ZVW A;  1BRW A;  4OWS A;  5BO3 A;  4YYY A;  2WK6 A;  4GA5 A;  2GVQ A;  4GA4 A;  3QS8 A;  4HKM A;  4OWU A;  5C2L A;  5BNE A;  4OWN A;  1V8G A;  1ZXY A;  4YI7 A;  4LHM A;  1O17 A;  4OWQ A;  4X5B A;  4ZOF A;  4N5V A;  5BO2 A;  3UU1 A;  4X5C A;  5EY3 A;  4YEK A;  3R6C A;  5C1R A;  2DSJ A;  3TWP A;  3QQS A;  3GBR A;  1OTP A;  4X59 A;  1KHD A;  2WK5 A;  4OWV A;  2BPQ A;  1AZY A;  4MUO A;  1KGZ A;  5BYT A;  4X5A A;  3H5Q A;  4ZTV A;  1ZYK A;  4EAF A;  4IJ1 A;  3R88 A;  4XR5 A;  4GKM A;  2ELC A;  3QSA A; 
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