1ICX | Genus

Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	37
sequence length	155
structure length	155
Chain Sequence	GIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTKGDVLSETVRDQAKFKGLGLFKAIEGYVLAHPDY

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Allergen
source organism	Lupinus luteus
publication title	Crystal structures of two homologous pathogenesis-related proteins from yellow lupine. pubmed doi rcsb
molecule keywords	PROTEIN LLR18A
total genus	37
structure length	155
sequence length	155
ec nomenclature
pdb deposition date	2001-04-02

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	1icxA00

3UIDA 3H3TA 2L65A 1LN3A 4IH2A 3RT2A 5E4MA 2R55A 4A8VA 4BKDA 2M89A 4LG5A 3NMPA 3C0VA 3PU2A 2L9PA 4PSBA 2E3PA 3KDHA 5E4DA 4BK7A 4IGWA 4RYVA 4A88A 1T27A 1FM4A 3NR4A 2I9YA 2NN5A 3NMVA 4M9WA 4BTZA 2GKDA 2LAKA 1BV1A 1JSSA 1QMRA 2NS9A 3Q64A 4C9IA 4Z3LA 3E85A 4A83A 2LCGA 3CNWA 3NJ0A 2MOUA 2QIMA 2VQ5A 4JHIA 3NS2A 4XRWA 5E46A 2E3RA 3KL1A 3OQUA 2A1LA 2EJXA 3NJ1A 3K90A 4WVOA 3KLXA 4DS8A 3NMTA 4A87A 5JO1A 3KB0A 3KAZA 3Q6AA 2N4AA 2E3OA 2PSOA 1ICXA 2KF2A 3KAYA 4LGBA 4A84A 3UJLA 3UQHA 3KDIA 4C9CA 2Z9ZA 2LGHA 1X53A 3TVQA 4OICA 2VNEA 4MAPA 2LDKA 5BRLA 3W9KA 1LN1A 1H2OA 2Q3QA 4QIPA 2LE1A 4XRTA 3NJOA 2LUZA 3OJIA 3GGNA 3QSZA 2E3QA 3P51A 4BK6A 5I8FA 3NEFA 4IGXA 2WQLA 3TFZA 3P0LA 4IHRA 1TW0A 2N4BA 1LLTA 2E3NA 2RERA 3NEGA 3QN1A 3TVRA 4IH0A 3FO5A 4LA7A 2BK0A 4N3EA 1XN6A 4JDLA 1IFVA 1XFSA 1EM2A 4REHA 4A8UA 2LIOA 4REIA 3NMNA 1TXCA 1FSKA 2LPXA 4JDAA 4C94A 3W9RA 3OH8A 1T17A 2Z9YA 4MNSA 3RT0C 3OTLA 2KTEA 2L8OA 4REJA 2REZA 3Q63A 3WG8A 2D4RA 2FLHA 3K3KA 5AMWA 3ZVUA 4A8GA 3IE5A 4A81A 4A85A 5JO2A 4MA6A 1ZXFA 4IGYA 2K5GA 2LEQA 2LF2A 3JRSA 3H3SA 2K7HA 4M9BA 1E09A 1VJHA 1Z94A 1XUVA 2IL5A 3PUTA 4JHHA 3RD6A 4DSCA 1UW5A 4LGAA 5I9JA 3NI8A 1BTVA 4BKCA 2E3MA 4JHGA 2FFSA 3IJTA 1LN2A 4IGVA 3JRQB 3F08A 4N0GC 2RESA 4Y31A 2E3SA 4A80A 1KCMA 2KCZA 1XDFA 2PCSA 3R6PA 3H3QA 5C9YA 2QPVA 3NMHA 5E4BA 1B6FA 3H3RA 3TL1A 5JNNA 2M47A 4A86A 3P9VA 2KEWA 4B9RA 4FPWA 4R7KA 4DSBA 4GY9A 3ELIA 4Q0KA 3KDJA 3KB3A 1XN5A
chains in the Genus database with same CATH superfamily

3UIDA 3H3TA 4E6FA 2L65A 3GL0A 1LN3A 4IH2A 3RT2A 5E4MA 2R55A 3GKEA 4A8VA 4BKDA 2M89A 4LG5A 3NMPA 3C0VA 3PU2A 2L9PA 4PSBA 2E3PA 3KDHA 5E4DA 4BK7A 4IGWA 4RYVA 4A88A 1T27A 1FM4A 3NR4A 4QDFB 2I9YA 2NN5A 3NMVA 4M9WA 4BTZA 2GKDA 2LAKA 1BV1A 1JSSA 1QMRA 2NS9A 3Q64A 4C9IA 4Z3LA 3E85A 3HXMA 4A83A 2LCGA 4N76A 3CNWA 3NJ0A 2MOUA 2QIMA 2VQ5A 4JHIA 3NS2A 4XRWA 5E46A 2E3RA 3KL1A 3OQUA 2A1LA 2EJXA 3GB4A 3NJ1A 3K90A 4WVOA 3KLXA 4DS8A 3NMTA 2LAFA 4A87A 5JO1A 3KB0A 3KAZA 3Q6AA 2N4AA 4QDFA 4NCBA 2E3OA 2PSOA 4QDCA 1ICXA 2KF2A 3KAYA 4LGBA 4A84A 3UJLA 3UQHA 3KDIA 4C9CA 2Z9ZA 2LGHA 1X53A 3TVQA 4OICA 2VNEA 4MAPA 2LDKA 5BRLA 3W9KA 1LN1A 1H2OA 2Q3QA 4QIPA 2LE1A 4XRTA 3NJOA 2LUZA 3OJIA 3GGNA 3QSZA 2E3QA 3P51A 4BK6A 5I8FA 3NEFA 4IGXA 2WQLA 3TFZA 3P0LA 4IHRA 1TW0A 2N4BA 1LLTA 2E3NA 2RERA 3GTEA 3NEGA 3QN1A 3TVRA 4N47A 4IH0A 3FO5A 4LA7A 2BK0A 4N3EA 1XN6A 4JDLA 3HM9A 1IFVA 1XFSA 1EM2A 4REHA 4A8UA 2LIOA 4REIA 3NMNA 1TXCA 3DLHA 1FSKA 2LPXA 2ZYLA 4JDAA 4C94A 3W9RA 5EKQC 4N41A 3OH8A 3GOBA 1T17A 2Z9YA 4MNSA 3RT0C 3OTLA 2KTEA 2L8OA 2YH6A 4REJA 2REZA 3Q63A 3WG8A 2D4RA 2FLHA 3TGOC 3K3KA 5AMWA 3ZVUA 4A8GA 3IE5A 4A81A 4A85A 5JO2A 4MA6A 1ZXFA 4IGYA 3GTSA 2K5GA 2LEQA 2LF2A 3JRSA 3H3SA 4JHYA 3F73A 3DLBA 2K7HA 4M9BA 4QCKA 1E09A 3NQNA 1VJHA 1Z94A 1XUVA 2IL5A 3PUTA 4JHHA 3RD6A 4DSCA 1UW5A 4LGAA 5I9JA 3HK2A 3HJFA 3NI8A 1BTVA 4BKCA 2E3MA 4JHGA 3GL2A 2FFSA 4QDDA 3IJTA 1LN2A 4IGVA 4NCAA 3JRQB 3F08A 4N0GC 2RESA 4Y31A 2E3SA 4A80A 1KCMA 2KCZA 1XDFA 2PCSA 3R6PA 3H3QA 4KPYA 5C9YA 3HVRA 2QPVA 3NMHA 5E4BA 1B6FA 3H3RA 3HO1A 3TL1A 5JNNA 2M47A 4A86A 3P9VA 2KEWA 4B9RA 4FPWA 4R7KA 4DSBA 4GY9A 3ELIA 4Q0KA 3KDJA 3KB3A 1XN5A
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3UID A;  3H3T A;  2L65 A;  1LN3 A;  4IH2 A;  3RT2 A;  5E4M A;  2R55 A;  4A8V A;  4BKD A;  2M89 A;  4LG5 A;  3NMP A;  3C0V A;  3PU2 A;  2L9P A;  4PSB A;  2E3P A;  3KDH A;  5E4D A;  4BK7 A;  4IGW A;  4RYV A;  4A88 A;  1T27 A;  1FM4 A;  3NR4 A;  2I9Y A;  2NN5 A;  3NMV A;  4M9W A;  4BTZ A;  2GKD A;  2LAK A;  1BV1 A;  1JSS A;  1QMR A;  2NS9 A;  3Q64 A;  4C9I A;  4Z3L A;  3E85 A;  4A83 A;  2LCG A;  3CNW A;  3NJ0 A;  2MOU A;  2QIM A;  2VQ5 A;  4JHI A;  3NS2 A;  4XRW A;  5E46 A;  2E3R A;  3KL1 A;  3OQU A;  2A1L A;  2EJX A;  3NJ1 A;  3K90 A;  4WVO A;  3KLX A;  4DS8 A;  3NMT A;  4A87 A;  5JO1 A;  3KB0 A;  3KAZ A;  3Q6A A;  2N4A A;  2E3O A;  2PSO A;  1ICX A;  2KF2 A;  3KAY A;  4LGB A;  4A84 A;  3UJL A;  3UQH A;  3KDI A;  4C9C A;  2Z9Z A;  2LGH A;  1X53 A;  3TVQ A;  4OIC A;  2VNE A;  4MAP A;  2LDK A;  5BRL A;  3W9K A;  1LN1 A;  1H2O A;  2Q3Q A;  4QIP A;  2LE1 A;  4XRT A;  3NJO A;  2LUZ A;  3OJI A;  3GGN A;  3QSZ A;  2E3Q A;  3P51 A;  4BK6 A;  5I8F A;  3NEF A;  4IGX A;  2WQL A;  3TFZ A;  3P0L A;  4IHR A;  1TW0 A;  2N4B A;  1LLT A;  2E3N A;  2RER A;  3NEG A;  3QN1 A;  3TVR A;  4IH0 A;  3FO5 A;  4LA7 A;  2BK0 A;  4N3E A;  1XN6 A;  4JDL A;  1IFV A;  1XFS A;  1EM2 A;  4REH A;  4A8U A;  2LIO A;  4REI A;  3NMN A;  1TXC A;  1FSK A;  2LPX A;  4JDA A;  4C94 A;  3W9R A;  3OH8 A;  1T17 A;  2Z9Y A;  4MNS A;  3RT0 C;  3OTL A;  2KTE A;  2L8O A;  4REJ A;  2REZ A;  3Q63 A;  3WG8 A;  2D4R A;  2FLH A;  3K3K A;  5AMW A;  3ZVU A;  4A8G A;  3IE5 A;  4A81 A;  4A85 A;  5JO2 A;  4MA6 A;  1ZXF A;  4IGY A;  2K5G A;  2LEQ A;  2LF2 A;  3JRS A;  3H3S A;  2K7H A;  4M9B A;  1E09 A;  1VJH A;  1Z94 A;  1XUV A;  2IL5 A;  3PUT A;  4JHH A;  3RD6 A;  4DSC A;  1UW5 A;  4LGA A;  5I9J A;  3NI8 A;  1BTV A;  4BKC A;  2E3M A;  4JHG A;  2FFS A;  3IJT A;  1LN2 A;  4IGV A;  3JRQ B;  3F08 A;  4N0G C;  2RES A;  4Y31 A;  2E3S A;  4A80 A;  1KCM A;  2KCZ A;  1XDF A;  2PCS A;  3R6P A;  3H3Q A;  5C9Y A;  2QPV A;  3NMH A;  5E4B A;  1B6F A;  3H3R A;  3TL1 A;  5JNN A;  2M47 A;  4A86 A;  3P9V A;  2KEW A;  4B9R A;  4FPW A;  4R7K A;  4DSB A;  4GY9 A;  3ELI A;  4Q0K A;  3KDJ A;  3KB3 A;  1XN5 A; 
#chains in the Genus database with same CATH topology
 3UID A;  3H3T A;  4E6F A;  2L65 A;  3GL0 A;  1LN3 A;  4IH2 A;  3RT2 A;  5E4M A;  2R55 A;  3GKE A;  4A8V A;  4BKD A;  2M89 A;  4LG5 A;  3NMP A;  3C0V A;  3PU2 A;  2L9P A;  4PSB A;  2E3P A;  3KDH A;  5E4D A;  4BK7 A;  4IGW A;  4RYV A;  4A88 A;  1T27 A;  1FM4 A;  3NR4 A;  4QDF B;  2I9Y A;  2NN5 A;  3NMV A;  4M9W A;  4BTZ A;  2GKD A;  2LAK A;  1BV1 A;  1JSS A;  1QMR A;  2NS9 A;  3Q64 A;  4C9I A;  4Z3L A;  3E85 A;  3HXM A;  4A83 A;  2LCG A;  4N76 A;  3CNW A;  3NJ0 A;  2MOU A;  2QIM A;  2VQ5 A;  4JHI A;  3NS2 A;  4XRW A;  5E46 A;  2E3R A;  3KL1 A;  3OQU A;  2A1L A;  2EJX A;  3GB4 A;  3NJ1 A;  3K90 A;  4WVO A;  3KLX A;  4DS8 A;  3NMT A;  2LAF A;  4A87 A;  5JO1 A;  3KB0 A;  3KAZ A;  3Q6A A;  2N4A A;  4QDF A;  4NCB A;  2E3O A;  2PSO A;  4QDC A;  1ICX A;  2KF2 A;  3KAY A;  4LGB A;  4A84 A;  3UJL A;  3UQH A;  3KDI A;  4C9C A;  2Z9Z A;  2LGH A;  1X53 A;  3TVQ A;  4OIC A;  2VNE A;  4MAP A;  2LDK A;  5BRL A;  3W9K A;  1LN1 A;  1H2O A;  2Q3Q A;  4QIP A;  2LE1 A;  4XRT A;  3NJO A;  2LUZ A;  3OJI A;  3GGN A;  3QSZ A;  2E3Q A;  3P51 A;  4BK6 A;  5I8F A;  3NEF A;  4IGX A;  2WQL A;  3TFZ A;  3P0L A;  4IHR A;  1TW0 A;  2N4B A;  1LLT A;  2E3N A;  2RER A;  3GTE A;  3NEG A;  3QN1 A;  3TVR A;  4N47 A;  4IH0 A;  3FO5 A;  4LA7 A;  2BK0 A;  4N3E A;  1XN6 A;  4JDL A;  3HM9 A;  1IFV A;  1XFS A;  1EM2 A;  4REH A;  4A8U A;  2LIO A;  4REI A;  3NMN A;  1TXC A;  3DLH A;  1FSK A;  2LPX A;  2ZYL A;  4JDA A;  4C94 A;  3W9R A;  5EKQ C;  4N41 A;  3OH8 A;  3GOB A;  1T17 A;  2Z9Y A;  4MNS A;  3RT0 C;  3OTL A;  2KTE A;  2L8O A;  2YH6 A;  4REJ A;  2REZ A;  3Q63 A;  3WG8 A;  2D4R A;  2FLH A;  3TGO C;  3K3K A;  5AMW A;  3ZVU A;  4A8G A;  3IE5 A;  4A81 A;  4A85 A;  5JO2 A;  4MA6 A;  1ZXF A;  4IGY A;  3GTS A;  2K5G A;  2LEQ A;  2LF2 A;  3JRS A;  3H3S A;  4JHY A;  3F73 A;  3DLB A;  2K7H A;  4M9B A;  4QCK A;  1E09 A;  3NQN A;  1VJH A;  1Z94 A;  1XUV A;  2IL5 A;  3PUT A;  4JHH A;  3RD6 A;  4DSC A;  1UW5 A;  4LGA A;  5I9J A;  3HK2 A;  3HJF A;  3NI8 A;  1BTV A;  4BKC A;  2E3M A;  4JHG A;  3GL2 A;  2FFS A;  4QDD A;  3IJT A;  1LN2 A;  4IGV A;  4NCA A;  3JRQ B;  3F08 A;  4N0G C;  2RES A;  4Y31 A;  2E3S A;  4A80 A;  1KCM A;  2KCZ A;  1XDF A;  2PCS A;  3R6P A;  3H3Q A;  4KPY A;  5C9Y A;  3HVR A;  2QPV A;  3NMH A;  5E4B A;  1B6F A;  3H3R A;  3HO1 A;  3TL1 A;  5JNN A;  2M47 A;  4A86 A;  3P9V A;  2KEW A;  4B9R A;  4FPW A;  4R7K A;  4DSB A;  4GY9 A;  3ELI A;  4Q0K A;  3KDJ A;  3KB3 A;  1XN5 A; 
#chains in the Genus database with same CATH homology
 3UID A;  3H3T A;  4E6F A;  2L65 A;  3GL0 A;  1LN3 A;  4IH2 A;  3RT2 A;  5E4M A;  2R55 A;  3GKE A;  4A8V A;  4BKD A;  2M89 A;  4LG5 A;  3NMP A;  3C0V A;  3PU2 A;  2L9P A;  4PSB A;  2E3P A;  3KDH A;  5E4D A;  4BK7 A;  4IGW A;  4RYV A;  4A88 A;  1T27 A;  1FM4 A;  3NR4 A;  4QDF B;  2I9Y A;  2NN5 A;  3NMV A;  4M9W A;  4BTZ A;  2GKD A;  2LAK A;  1BV1 A;  1JSS A;  1QMR A;  2NS9 A;  3Q64 A;  4C9I A;  4Z3L A;  3E85 A;  3HXM A;  4A83 A;  2LCG A;  4N76 A;  3CNW A;  3NJ0 A;  2MOU A;  2QIM A;  2VQ5 A;  4JHI A;  3NS2 A;  4XRW A;  5E46 A;  2E3R A;  3KL1 A;  3OQU A;  2A1L A;  2EJX A;  3GB4 A;  3NJ1 A;  3K90 A;  4WVO A;  3KLX A;  4DS8 A;  3NMT A;  2LAF A;  4A87 A;  5JO1 A;  3KB0 A;  3KAZ A;  3Q6A A;  2N4A A;  4QDF A;  4NCB A;  2E3O A;  2PSO A;  4QDC A;  1ICX A;  2KF2 A;  3KAY A;  4LGB A;  4A84 A;  3UJL A;  3UQH A;  3KDI A;  4C9C A;  2Z9Z A;  2LGH A;  1X53 A;  3TVQ A;  4OIC A;  2VNE A;  4MAP A;  2LDK A;  5BRL A;  3W9K A;  1LN1 A;  1H2O A;  2Q3Q A;  4QIP A;  2LE1 A;  4XRT A;  3NJO A;  2LUZ A;  3OJI A;  3GGN A;  3QSZ A;  2E3Q A;  3P51 A;  4BK6 A;  5I8F A;  3NEF A;  4IGX A;  2WQL A;  3TFZ A;  3P0L A;  4IHR A;  1TW0 A;  2N4B A;  1LLT A;  2E3N A;  2RER A;  3GTE A;  3NEG A;  3QN1 A;  3TVR A;  4N47 A;  4IH0 A;  3FO5 A;  4LA7 A;  2BK0 A;  4N3E A;  1XN6 A;  4JDL A;  3HM9 A;  1IFV A;  1XFS A;  1EM2 A;  4REH A;  4A8U A;  2LIO A;  4REI A;  3NMN A;  1TXC A;  3DLH A;  1FSK A;  2LPX A;  2ZYL A;  4JDA A;  4C94 A;  3W9R A;  5EKQ C;  4N41 A;  3OH8 A;  3GOB A;  1T17 A;  2Z9Y A;  4MNS A;  3RT0 C;  3OTL A;  2KTE A;  2L8O A;  2YH6 A;  4REJ A;  2REZ A;  3Q63 A;  3WG8 A;  2D4R A;  2FLH A;  3TGO C;  3K3K A;  5AMW A;  3ZVU A;  4A8G A;  3IE5 A;  4A81 A;  4A85 A;  5JO2 A;  4MA6 A;  1ZXF A;  4IGY A;  3GTS A;  2K5G A;  2LEQ A;  2LF2 A;  3JRS A;  3H3S A;  4JHY A;  3F73 A;  3DLB A;  2K7H A;  4M9B A;  4QCK A;  1E09 A;  3NQN A;  1VJH A;  1Z94 A;  1XUV A;  2IL5 A;  3PUT A;  4JHH A;  3RD6 A;  4DSC A;  1UW5 A;  4LGA A;  5I9J A;  3HK2 A;  3HJF A;  3NI8 A;  1BTV A;  4BKC A;  2E3M A;  4JHG A;  3GL2 A;  2FFS A;  4QDD A;  3IJT A;  1LN2 A;  4IGV A;  4NCA A;  3JRQ B;  3F08 A;  4N0G C;  2RES A;  4Y31 A;  2E3S A;  4A80 A;  1KCM A;  2KCZ A;  1XDF A;  2PCS A;  3R6P A;  3H3Q A;  4KPY A;  5C9Y A;  3HVR A;  2QPV A;  3NMH A;  5E4B A;  1B6F A;  3H3R A;  3HO1 A;  3TL1 A;  5JNN A;  2M47 A;  4A86 A;  3P9V A;  2KEW A;  4B9R A;  4FPW A;  4R7K A;  4DSB A;  4GY9 A;  3ELI A;  4Q0K A;  3KDJ A;  3KB3 A;  1XN5 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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1ICXA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN