2LGH | Genus

Total Genus 35

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	35
sequence length	144
structure length	144
Chain Sequence	MKISIEAHIEQEIEAVWWAWNDPDCIARWNAASSDWHTTGSRVDLVVGGRFCHHMAAKDGSAGFDFTGTFTRVEAPTRLSFVMDDGREVDVQFASEPGGTWVQETFDAETSHTPAQQQAGWQGILDNFKRYVEAAGLEHHHHHH

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Structural genomics, unknown function
source organism	Aeromonas hydrophila subsp. hydrophila
publication title	Solution NMR structure of the AHSA1-like protein AHA_2358 from Aeromonas hydrophila refined with NH RDCs. Northeast Structural Genomics Consortium Target AhR99. rcsb
molecule keywords	Uncharacterized protein
total genus	35
structure length	144
sequence length	144
ec nomenclature
pdb deposition date	2011-07-26

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF08327	AHSA1	Activator of Hsp90 ATPase homolog 1-like protein

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	2lghA00

3KAZA 3NEFA 3NS2A 4R7KA 1XFSA 4JDLA 2LUZA 3NR4A 4Q0KA 5E4DA 3GGNA 3IE5A 4A8VA 2LE1A 2LGHA 3H3QA 3JRQB 4IGXA 3KB0A 4A85A 2E3SA 2E3QA 4MA6A 2E3MA 4BKCA 4C9CA 5C9YA 2LAKA 1EM2A 2VQ5A 4PSBA 5AMWA 2LCGA 1QMRA 2Z9YA 3KB3A 1T17A 3ELIA 3R6PA 4BKDA 1Z94A 3NJ0A 2E3RA 2NN5A 4LGBA 4REHA 1E09A 4A81A 1JSSA 2E3PA 4A8GA 4REIA 3RD6A 1BV1A 4XRWA 3OJIA 3TVRA 5I9JA 3RT2A 3FO5A 4BK6A 5I8FA 4C9IA 5E4MA 3P9VA 5JO2A 3F08A 3H3RA 2L9PA 2MOUA 3NMNA 3PU2A 2KEWA 2N4BA 2EJXA 2R55A 3OH8A 2GKDA 3WG8A 1TW0A 4XRTA 2N4AA 2NS9A 4JDAA 3W9RA 4C94A 3K3KA 3NI8A 2QPVA 4DSCA 1T27A 1LN2A 5BRLA 3H3SA 3OQUA 3H3TA 4JHGA 2PCSA 2KTEA 2KCZA 4DSBA 3KLXA 1TXCA 1FM4A 1X53A 1XN6A 2K7HA 4LG5A 1ZXFA 2KF2A 3ZVUA 3TFZA 2LDKA 3KAYA 2WQLA 3NMHA 2FLHA 3Q6AA 3P0LA 3KL1A 3K90A 2A1LA 2L65A 2K5GA 4BTZA 4N3EA 4IHRA 4IH2A 5E4BA 4A88A 4IGVA 3IJTA 4JHIA 2E3NA 2E3OA 3QN1A 2Q3QA 4A84A 1FSKA 4B9RA 3NEGA 4JHHA 4REJA 4Z3LA 3NMVA 4M9WA 4QIPA 4RYVA 2FFSA 2BK0A 2L8OA 4LGAA 3UIDA 3KDHA 4A8UA 2I9YA 4LA7A 3JRSA 4OICA 4IGWA 4WVOA 3CNWA 4FPWA 1LN3A 2IL5A 2VNEA 1H2OA 1LN1A 3C0VA 3TL1A 4A86A 3UQHA 4MNSA 4DS8A 3NMTA 1VJHA 3NJOA 2LF2A 4MAPA 3W9KA 1BTVA 3TVQA 4Y31A 2PSOA 1XUVA 2D4RA 3OTLA 3P51A 3QSZA 4GY9A 4IH0A 2LPXA 4N0GC 2RESA 1UW5A 2LEQA 3KDIA 4M9BA 3PUTA 3Q63A 2REZA 4IGYA 5JNNA 1B6FA 2LIOA 4A80A 3E85A 1XDFA 3UJLA 1LLTA 3KDJA 2M47A 4BK7A 5JO1A 3RT0C 4A87A 2RERA 2Z9ZA 4A83A 1IFVA 1KCMA 1XN5A 5E46A 2QIMA 2M89A 3NJ1A 3Q64A 3NMPA 1ICXA
chains in the Genus database with same CATH superfamily

4QDCA 3HXMA 3KAZA 3NEFA 3NS2A 4R7KA 1XFSA 4JDLA 2LUZA 3NR4A 4Q0KA 5E4DA 3GGNA 3IE5A 4A8VA 2LE1A 2LGHA 3H3QA 3JRQB 4IGXA 3KB0A 4A85A 2E3SA 2E3QA 4MA6A 2E3MA 3HO1A 4E6FA 4BKCA 4C9CA 5C9YA 2LAKA 1EM2A 2VQ5A 4PSBA 3DLBA 4QCKA 5AMWA 2LCGA 1QMRA 3HVRA 2Z9YA 3KB3A 1T17A 3ELIA 3R6PA 4BKDA 1Z94A 3NJ0A 2E3RA 2NN5A 4LGBA 4REHA 1E09A 4A81A 1JSSA 2E3PA 4A8GA 4REIA 3RD6A 1BV1A 3GOBA 3GB4A 3NQNA 4XRWA 3OJIA 3TVRA 5I9JA 3RT2A 3FO5A 4BK6A 5I8FA 4C9IA 5E4MA 3GL0A 3P9VA 5JO2A 3F08A 3H3RA 2L9PA 2MOUA 3NMNA 3PU2A 2KEWA 2N4BA 2EJXA 2R55A 3OH8A 2GKDA 3WG8A 1TW0A 4XRTA 2N4AA 2NS9A 4JDAA 3W9RA 3F73A 4C94A 3K3KA 3NI8A 4NCBA 4QDDA 3GKEA 2QPVA 4DSCA 1T27A 1LN2A 4NCAA 5BRLA 2ZYLA 3H3SA 3OQUA 3H3TA 4JHGA 2PCSA 2KTEA 2KCZA 5EKQC 4JHYA 4DSBA 3KLXA 1TXCA 1FM4A 1X53A 1XN6A 2K7HA 4LG5A 3TGOC 3HJFA 1ZXFA 2KF2A 3ZVUA 3TFZA 2LDKA 3DLHA 3KAYA 2WQLA 3NMHA 2FLHA 3Q6AA 3GTSA 3KL1A 3P0LA 4QDFA 3K90A 2A1LA 4N76A 2L65A 2K5GA 4BTZA 4N3EA 4IHRA 4IH2A 5E4BA 4A88A 4IGVA 3IJTA 4JHIA 2E3NA 2E3OA 3QN1A 2Q3QA 4A84A 1FSKA 4B9RA 3NEGA 4JHHA 4REJA 4Z3LA 3NMVA 4M9WA 4QIPA 4RYVA 2FFSA 2BK0A 2L8OA 4LGAA 3UIDA 3KDHA 4A8UA 2I9YA 4LA7A 3JRSA 4OICA 4IGWA 4WVOA 3CNWA 4FPWA 1LN3A 2IL5A 2VNEA 1H2OA 2YH6A 1LN1A 3C0VA 3TL1A 4A86A 3UQHA 4MNSA 4DS8A 3NMTA 1VJHA 3NJOA 4QDFB 2LF2A 4MAPA 3W9KA 1BTVA 3TVQA 4Y31A 2PSOA 1XUVA 2D4RA 3OTLA 3P51A 3QSZA 4GY9A 4IH0A 3HM9A 2LPXA 4N0GC 2RESA 4N47A 1UW5A 2LEQA 3KDIA 4M9BA 2LAFA 3PUTA 3Q63A 2REZA 4IGYA 4KPYA 5JNNA 1B6FA 4N41A 2LIOA 4A80A 3E85A 1XDFA 3UJLA 1LLTA 3KDJA 2M47A 4BK7A 5JO1A 3RT0C 3HK2A 3GTEA 4A87A 2RERA 3GL2A 2Z9ZA 4A83A 1IFVA 1KCMA 1XN5A 5E46A 2QIMA 2M89A 3NJ1A 3Q64A 3NMPA 1ICXA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3KAZ A;  3NEF A;  3NS2 A;  4R7K A;  1XFS A;  4JDL A;  2LUZ A;  3NR4 A;  4Q0K A;  5E4D A;  3GGN A;  3IE5 A;  4A8V A;  2LE1 A;  2LGH A;  3H3Q A;  3JRQ B;  4IGX A;  3KB0 A;  4A85 A;  2E3S A;  2E3Q A;  4MA6 A;  2E3M A;  4BKC A;  4C9C A;  5C9Y A;  2LAK A;  1EM2 A;  2VQ5 A;  4PSB A;  5AMW A;  2LCG A;  1QMR A;  2Z9Y A;  3KB3 A;  1T17 A;  3ELI A;  3R6P A;  4BKD A;  1Z94 A;  3NJ0 A;  2E3R A;  2NN5 A;  4LGB A;  4REH A;  1E09 A;  4A81 A;  1JSS A;  2E3P A;  4A8G A;  4REI A;  3RD6 A;  1BV1 A;  4XRW A;  3OJI A;  3TVR A;  5I9J A;  3RT2 A;  3FO5 A;  4BK6 A;  5I8F A;  4C9I A;  5E4M A;  3P9V A;  5JO2 A;  3F08 A;  3H3R A;  2L9P A;  2MOU A;  3NMN A;  3PU2 A;  2KEW A;  2N4B A;  2EJX A;  2R55 A;  3OH8 A;  2GKD A;  3WG8 A;  1TW0 A;  4XRT A;  2N4A A;  2NS9 A;  4JDA A;  3W9R A;  4C94 A;  3K3K A;  3NI8 A;  2QPV A;  4DSC A;  1T27 A;  1LN2 A;  5BRL A;  3H3S A;  3OQU A;  3H3T A;  4JHG A;  2PCS A;  2KTE A;  2KCZ A;  4DSB A;  3KLX A;  1TXC A;  1FM4 A;  1X53 A;  1XN6 A;  2K7H A;  4LG5 A;  1ZXF A;  2KF2 A;  3ZVU A;  3TFZ A;  2LDK A;  3KAY A;  2WQL A;  3NMH A;  2FLH A;  3Q6A A;  3P0L A;  3KL1 A;  3K90 A;  2A1L A;  2L65 A;  2K5G A;  4BTZ A;  4N3E A;  4IHR A;  4IH2 A;  5E4B A;  4A88 A;  4IGV A;  3IJT A;  4JHI A;  2E3N A;  2E3O A;  3QN1 A;  2Q3Q A;  4A84 A;  1FSK A;  4B9R A;  3NEG A;  4JHH A;  4REJ A;  4Z3L A;  3NMV A;  4M9W A;  4QIP A;  4RYV A;  2FFS A;  2BK0 A;  2L8O A;  4LGA A;  3UID A;  3KDH A;  4A8U A;  2I9Y A;  4LA7 A;  3JRS A;  4OIC A;  4IGW A;  4WVO A;  3CNW A;  4FPW A;  1LN3 A;  2IL5 A;  2VNE A;  1H2O A;  1LN1 A;  3C0V A;  3TL1 A;  4A86 A;  3UQH A;  4MNS A;  4DS8 A;  3NMT A;  1VJH A;  3NJO A;  2LF2 A;  4MAP A;  3W9K A;  1BTV A;  3TVQ A;  4Y31 A;  2PSO A;  1XUV A;  2D4R A;  3OTL A;  3P51 A;  3QSZ A;  4GY9 A;  4IH0 A;  2LPX A;  4N0G C;  2RES A;  1UW5 A;  2LEQ A;  3KDI A;  4M9B A;  3PUT A;  3Q63 A;  2REZ A;  4IGY A;  5JNN A;  1B6F A;  2LIO A;  4A80 A;  3E85 A;  1XDF A;  3UJL A;  1LLT A;  3KDJ A;  2M47 A;  4BK7 A;  5JO1 A;  3RT0 C;  4A87 A;  2RER A;  2Z9Z A;  4A83 A;  1IFV A;  1KCM A;  1XN5 A;  5E46 A;  2QIM A;  2M89 A;  3NJ1 A;  3Q64 A;  3NMP A;  1ICX A; 
#chains in the Genus database with same CATH topology
 4QDC A;  3HXM A;  3KAZ A;  3NEF A;  3NS2 A;  4R7K A;  1XFS A;  4JDL A;  2LUZ A;  3NR4 A;  4Q0K A;  5E4D A;  3GGN A;  3IE5 A;  4A8V A;  2LE1 A;  2LGH A;  3H3Q A;  3JRQ B;  4IGX A;  3KB0 A;  4A85 A;  2E3S A;  2E3Q A;  4MA6 A;  2E3M A;  3HO1 A;  4E6F A;  4BKC A;  4C9C A;  5C9Y A;  2LAK A;  1EM2 A;  2VQ5 A;  4PSB A;  3DLB A;  4QCK A;  5AMW A;  2LCG A;  1QMR A;  3HVR A;  2Z9Y A;  3KB3 A;  1T17 A;  3ELI A;  3R6P A;  4BKD A;  1Z94 A;  3NJ0 A;  2E3R A;  2NN5 A;  4LGB A;  4REH A;  1E09 A;  4A81 A;  1JSS A;  2E3P A;  4A8G A;  4REI A;  3RD6 A;  1BV1 A;  3GOB A;  3GB4 A;  3NQN A;  4XRW A;  3OJI A;  3TVR A;  5I9J A;  3RT2 A;  3FO5 A;  4BK6 A;  5I8F A;  4C9I A;  5E4M A;  3GL0 A;  3P9V A;  5JO2 A;  3F08 A;  3H3R A;  2L9P A;  2MOU A;  3NMN A;  3PU2 A;  2KEW A;  2N4B A;  2EJX A;  2R55 A;  3OH8 A;  2GKD A;  3WG8 A;  1TW0 A;  4XRT A;  2N4A A;  2NS9 A;  4JDA A;  3W9R A;  3F73 A;  4C94 A;  3K3K A;  3NI8 A;  4NCB A;  4QDD A;  3GKE A;  2QPV A;  4DSC A;  1T27 A;  1LN2 A;  4NCA A;  5BRL A;  2ZYL A;  3H3S A;  3OQU A;  3H3T A;  4JHG A;  2PCS A;  2KTE A;  2KCZ A;  5EKQ C;  4JHY A;  4DSB A;  3KLX A;  1TXC A;  1FM4 A;  1X53 A;  1XN6 A;  2K7H A;  4LG5 A;  3TGO C;  3HJF A;  1ZXF A;  2KF2 A;  3ZVU A;  3TFZ A;  2LDK A;  3DLH A;  3KAY A;  2WQL A;  3NMH A;  2FLH A;  3Q6A A;  3GTS A;  3KL1 A;  3P0L A;  4QDF A;  3K90 A;  2A1L A;  4N76 A;  2L65 A;  2K5G A;  4BTZ A;  4N3E A;  4IHR A;  4IH2 A;  5E4B A;  4A88 A;  4IGV A;  3IJT A;  4JHI A;  2E3N A;  2E3O A;  3QN1 A;  2Q3Q A;  4A84 A;  1FSK A;  4B9R A;  3NEG A;  4JHH A;  4REJ A;  4Z3L A;  3NMV A;  4M9W A;  4QIP A;  4RYV A;  2FFS A;  2BK0 A;  2L8O A;  4LGA A;  3UID A;  3KDH A;  4A8U A;  2I9Y A;  4LA7 A;  3JRS A;  4OIC A;  4IGW A;  4WVO A;  3CNW A;  4FPW A;  1LN3 A;  2IL5 A;  2VNE A;  1H2O A;  2YH6 A;  1LN1 A;  3C0V A;  3TL1 A;  4A86 A;  3UQH A;  4MNS A;  4DS8 A;  3NMT A;  1VJH A;  3NJO A;  4QDF B;  2LF2 A;  4MAP A;  3W9K A;  1BTV A;  3TVQ A;  4Y31 A;  2PSO A;  1XUV A;  2D4R A;  3OTL A;  3P51 A;  3QSZ A;  4GY9 A;  4IH0 A;  3HM9 A;  2LPX A;  4N0G C;  2RES A;  4N47 A;  1UW5 A;  2LEQ A;  3KDI A;  4M9B A;  2LAF A;  3PUT A;  3Q63 A;  2REZ A;  4IGY A;  4KPY A;  5JNN A;  1B6F A;  4N41 A;  2LIO A;  4A80 A;  3E85 A;  1XDF A;  3UJL A;  1LLT A;  3KDJ A;  2M47 A;  4BK7 A;  5JO1 A;  3RT0 C;  3HK2 A;  3GTE A;  4A87 A;  2RER A;  3GL2 A;  2Z9Z A;  4A83 A;  1IFV A;  1KCM A;  1XN5 A;  5E46 A;  2QIM A;  2M89 A;  3NJ1 A;  3Q64 A;  3NMP A;  1ICX A; 
#chains in the Genus database with same CATH homology
 4QDC A;  3HXM A;  3KAZ A;  3NEF A;  3NS2 A;  4R7K A;  1XFS A;  4JDL A;  2LUZ A;  3NR4 A;  4Q0K A;  5E4D A;  3GGN A;  3IE5 A;  4A8V A;  2LE1 A;  2LGH A;  3H3Q A;  3JRQ B;  4IGX A;  3KB0 A;  4A85 A;  2E3S A;  2E3Q A;  4MA6 A;  2E3M A;  3HO1 A;  4E6F A;  4BKC A;  4C9C A;  5C9Y A;  2LAK A;  1EM2 A;  2VQ5 A;  4PSB A;  3DLB A;  4QCK A;  5AMW A;  2LCG A;  1QMR A;  3HVR A;  2Z9Y A;  3KB3 A;  1T17 A;  3ELI A;  3R6P A;  4BKD A;  1Z94 A;  3NJ0 A;  2E3R A;  2NN5 A;  4LGB A;  4REH A;  1E09 A;  4A81 A;  1JSS A;  2E3P A;  4A8G A;  4REI A;  3RD6 A;  1BV1 A;  3GOB A;  3GB4 A;  3NQN A;  4XRW A;  3OJI A;  3TVR A;  5I9J A;  3RT2 A;  3FO5 A;  4BK6 A;  5I8F A;  4C9I A;  5E4M A;  3GL0 A;  3P9V A;  5JO2 A;  3F08 A;  3H3R A;  2L9P A;  2MOU A;  3NMN A;  3PU2 A;  2KEW A;  2N4B A;  2EJX A;  2R55 A;  3OH8 A;  2GKD A;  3WG8 A;  1TW0 A;  4XRT A;  2N4A A;  2NS9 A;  4JDA A;  3W9R A;  3F73 A;  4C94 A;  3K3K A;  3NI8 A;  4NCB A;  4QDD A;  3GKE A;  2QPV A;  4DSC A;  1T27 A;  1LN2 A;  4NCA A;  5BRL A;  2ZYL A;  3H3S A;  3OQU A;  3H3T A;  4JHG A;  2PCS A;  2KTE A;  2KCZ A;  5EKQ C;  4JHY A;  4DSB A;  3KLX A;  1TXC A;  1FM4 A;  1X53 A;  1XN6 A;  2K7H A;  4LG5 A;  3TGO C;  3HJF A;  1ZXF A;  2KF2 A;  3ZVU A;  3TFZ A;  2LDK A;  3DLH A;  3KAY A;  2WQL A;  3NMH A;  2FLH A;  3Q6A A;  3GTS A;  3KL1 A;  3P0L A;  4QDF A;  3K90 A;  2A1L A;  4N76 A;  2L65 A;  2K5G A;  4BTZ A;  4N3E A;  4IHR A;  4IH2 A;  5E4B A;  4A88 A;  4IGV A;  3IJT A;  4JHI A;  2E3N A;  2E3O A;  3QN1 A;  2Q3Q A;  4A84 A;  1FSK A;  4B9R A;  3NEG A;  4JHH A;  4REJ A;  4Z3L A;  3NMV A;  4M9W A;  4QIP A;  4RYV A;  2FFS A;  2BK0 A;  2L8O A;  4LGA A;  3UID A;  3KDH A;  4A8U A;  2I9Y A;  4LA7 A;  3JRS A;  4OIC A;  4IGW A;  4WVO A;  3CNW A;  4FPW A;  1LN3 A;  2IL5 A;  2VNE A;  1H2O A;  2YH6 A;  1LN1 A;  3C0V A;  3TL1 A;  4A86 A;  3UQH A;  4MNS A;  4DS8 A;  3NMT A;  1VJH A;  3NJO A;  4QDF B;  2LF2 A;  4MAP A;  3W9K A;  1BTV A;  3TVQ A;  4Y31 A;  2PSO A;  1XUV A;  2D4R A;  3OTL A;  3P51 A;  3QSZ A;  4GY9 A;  4IH0 A;  3HM9 A;  2LPX A;  4N0G C;  2RES A;  4N47 A;  1UW5 A;  2LEQ A;  3KDI A;  4M9B A;  2LAF A;  3PUT A;  3Q63 A;  2REZ A;  4IGY A;  4KPY A;  5JNN A;  1B6F A;  4N41 A;  2LIO A;  4A80 A;  3E85 A;  1XDF A;  3UJL A;  1LLT A;  3KDJ A;  2M47 A;  4BK7 A;  5JO1 A;  3RT0 C;  3HK2 A;  3GTE A;  4A87 A;  2RER A;  3GL2 A;  2Z9Z A;  4A83 A;  1IFV A;  1KCM A;  1XN5 A;  5E46 A;  2QIM A;  2M89 A;  3NJ1 A;  3Q64 A;  3NMP A;  1ICX A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

2LGHA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations