3NJ0 | Genus

Total Genus 46

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	46
sequence length	178
structure length	177
Chain Sequence	GLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSAPM

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hormone receptor
source organism	Arabidopsis thaliana
publication title	Structural basis for selective activation of ABA receptors. pubmed doi rcsb
molecule keywords	Abscisic acid receptor PYL2
total genus	46
structure length	177
sequence length	178
chains with identical sequence	B, C
ec nomenclature
pdb deposition date	2010-06-16

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF10604	Polyketide_cyc2	Polyketide cyclase / dehydrase and lipid transport

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	3nj0A00

1XDFA 3KB0A 4IH0A 4M9WA 1T17A 3JRQB 4JHHA 4IGXA 3QSZA 3IJTA 3PU2A 4N0GC 4A83A 1JSSA 4Y31A 2LE1A 3NMTA 1H2OA 3GGNA 3K90A 4JHIA 5E4BA 1LN2A 2PCSA 3NI8A 1FM4A 4RYVA 4BK7A 4WVOA 2D4RA 2VNEA 4B9RA 4IH2A 5JO2A 2EJXA 3KAYA 3KB3A 3ZVUA 1XUVA 4BKCA 1E09A 5I9JA 2RESA 4REJA 1KCMA 2WQLA 3Q64A 3H3QA 3JRSA 3NJOA 3ELIA 4XRTA 2KF2A 4IHRA 4A81A 2N4BA 2BK0A 4A85A 3RT0C 1VJHA 3H3SA 1TW0A 4N3EA 2NN5A 3KDIA 3KDJA 2KCZA 3KLXA 3R6PA 2Q3QA 4Q0KA 5BRLA 1BV1A 3W9KA 4IGVA 2E3QA 5I8FA 4M9BA 2L8OA 2RERA 4DSCA 2KTEA 3C0VA 5JNNA 2Z9ZA 4BKDA 4LGBA 1ZXFA 2N4AA 4XRWA 3PUTA 2L65A 4A8VA 4BK6A 3TVQA 2LPXA 4IGWA 4MAPA 3QN1A 5C9YA 2QPVA 2KEWA 3IE5A 3NJ0A 3RT2A 4JDAA 4IGYA 5JO1A 3H3RA 5E46A 2QIMA 3H3TA 4R7KA 3NMNA 3Q63A 4C9IA 2LGHA 3OJIA 3P0LA 4BTZA 3TFZA 3P9VA 4A80A 1XN6A 3NMVA 2LF2A 2L9PA 3NEFA 1T27A 2LEQA 2R55A 2VQ5A 1LN1A 2Z9YA 3K3KA 2IL5A 3NMPA 2I9YA 3P51A 3OQUA 3KL1A 4A84A 4A88A 4REIA 3W9RA 1X53A 1ICXA 2A1LA 2FLHA 3NS2A 2K5GA 3NMHA 2GKDA 2LCGA 1UW5A 1XN5A 1TXCA 3CNWA 4FPWA 5E4DA 3UJLA 4QIPA 3E85A 2LDKA 1FSKA 5AMWA 2REZA 3KDHA 2E3PA 4C94A 4A86A 3FO5A 4Z3LA 3TL1A 1QMRA 1XFSA 3F08A 4A87A 2E3SA 2FFSA 2NS9A 3TVRA 2LIOA 1B6FA 1EM2A 2LAKA 2M89A 3RD6A 3NJ1A 2E3RA 2E3MA 2LUZA 3OH8A 2PSOA 4JDLA 5E4MA 3NR4A 3UIDA 2M47A 4LGAA 3NEGA 4JHGA 3UQHA 3OTLA 4DS8A 1BTVA 4A8UA 2E3NA 1IFVA 1Z94A 2E3OA 4MNSA 2K7HA 3WG8A 1LN3A 4MA6A 1LLTA 3Q6AA 4REHA 2MOUA 4C9CA 4OICA 4GY9A 4PSBA 4LA7A 4A8GA 4LG5A 4DSBA 3KAZA
chains in the Genus database with same CATH superfamily

1XDFA 3HM9A 3KB0A 4IH0A 4M9WA 1T17A 3JRQB 4JHHA 4IGXA 3QSZA 3IJTA 3PU2A 4N0GC 4A83A 1JSSA 4Y31A 2LE1A 3NMTA 1H2OA 3GGNA 2LAFA 3K90A 4JHIA 5E4BA 1LN2A 2PCSA 3NI8A 4KPYA 1FM4A 4RYVA 4BK7A 4WVOA 2D4RA 2YH6A 2VNEA 4QDCA 4IH2A 2ZYLA 2EJXA 4JHYA 4B9RA 5JO2A 3KAYA 3KB3A 3ZVUA 1XUVA 4QDFB 4BKCA 1E09A 3NQNA 5I9JA 2RESA 4REJA 1KCMA 2WQLA 3Q64A 3H3QA 3JRSA 3NJOA 3ELIA 4XRTA 2KF2A 4IHRA 4A81A 2N4BA 2BK0A 4A85A 3HK2A 4QDDA 3RT0C 1VJHA 3H3SA 1TW0A 3GL0A 2NN5A 4N3EA 3KDIA 3KDJA 2KCZA 3KLXA 3R6PA 4E6FA 2Q3QA 4Q0KA 5BRLA 1BV1A 3W9KA 4IGVA 2E3QA 5I8FA 4M9BA 5EKQC 2L8OA 2RERA 4DSCA 2KTEA 3C0VA 5JNNA 3GOBA 3HO1A 2Z9ZA 4BKDA 4LGBA 1ZXFA 2N4AA 4XRWA 3PUTA 2L65A 4A8VA 4BK6A 3TVQA 4N76A 2LPXA 4IGWA 4MAPA 3QN1A 5C9YA 2QPVA 4QDFA 2KEWA 3IE5A 3NJ0A 3GB4A 3RT2A 4JDAA 4IGYA 3F73A 5JO1A 3H3RA 5E46A 3GTEA 2QIMA 3H3TA 4R7KA 3NMNA 3Q63A 4C9IA 2LGHA 3OJIA 3P0LA 4BTZA 3TFZA 3P9VA 4A80A 1XN6A 3NMVA 3HJFA 2LF2A 4QCKA 2L9PA 3NEFA 1T27A 2LEQA 2R55A 2VQ5A 4NCBA 1LN1A 2Z9YA 3K3KA 2IL5A 3NMPA 2I9YA 3P51A 3OQUA 3KL1A 4A84A 4A88A 4REIA 3W9RA 1X53A 1ICXA 2A1LA 2FLHA 3GTSA 2K5GA 3NMHA 3NS2A 2LCGA 2GKDA 1UW5A 1XN5A 1TXCA 3CNWA 4FPWA 5E4DA 3UJLA 4QIPA 3DLBA 4N41A 3E85A 3HXMA 2LDKA 1FSKA 5AMWA 2REZA 3KDHA 2E3PA 4C94A 3DLHA 4A86A 3FO5A 4Z3LA 3TL1A 1QMRA 1XFSA 3F08A 4A87A 2E3SA 2FFSA 2NS9A 3GL2A 4NCAA 3TVRA 3HVRA 2LIOA 3GKEA 1B6FA 1EM2A 2LAKA 2M89A 3RD6A 3NJ1A 2E3RA 2E3MA 2LUZA 3OH8A 3TGOC 2PSOA 4JDLA 5E4MA 3NR4A 3UIDA 2M47A 4LGAA 3NEGA 4JHGA 3UQHA 3OTLA 4DS8A 1BTVA 4N47A 4A8UA 2E3NA 1IFVA 1Z94A 2E3OA 4MNSA 2K7HA 3WG8A 1LN3A 4MA6A 1LLTA 3Q6AA 4REHA 2MOUA 4C9CA 4OICA 4GY9A 4PSBA 4LA7A 4A8GA 4LG5A 4DSBA 3KAZA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 1XDF A;  3KB0 A;  4IH0 A;  4M9W A;  1T17 A;  3JRQ B;  4JHH A;  4IGX A;  3QSZ A;  3IJT A;  3PU2 A;  4N0G C;  4A83 A;  1JSS A;  4Y31 A;  2LE1 A;  3NMT A;  1H2O A;  3GGN A;  3K90 A;  4JHI A;  5E4B A;  1LN2 A;  2PCS A;  3NI8 A;  1FM4 A;  4RYV A;  4BK7 A;  4WVO A;  2D4R A;  2VNE A;  4B9R A;  4IH2 A;  5JO2 A;  2EJX A;  3KAY A;  3KB3 A;  3ZVU A;  1XUV A;  4BKC A;  1E09 A;  5I9J A;  2RES A;  4REJ A;  1KCM A;  2WQL A;  3Q64 A;  3H3Q A;  3JRS A;  3NJO A;  3ELI A;  4XRT A;  2KF2 A;  4IHR A;  4A81 A;  2N4B A;  2BK0 A;  4A85 A;  3RT0 C;  1VJH A;  3H3S A;  1TW0 A;  4N3E A;  2NN5 A;  3KDI A;  3KDJ A;  2KCZ A;  3KLX A;  3R6P A;  2Q3Q A;  4Q0K A;  5BRL A;  1BV1 A;  3W9K A;  4IGV A;  2E3Q A;  5I8F A;  4M9B A;  2L8O A;  2RER A;  4DSC A;  2KTE A;  3C0V A;  5JNN A;  2Z9Z A;  4BKD A;  4LGB A;  1ZXF A;  2N4A A;  4XRW A;  3PUT A;  2L65 A;  4A8V A;  4BK6 A;  3TVQ A;  2LPX A;  4IGW A;  4MAP A;  3QN1 A;  5C9Y A;  2QPV A;  2KEW A;  3IE5 A;  3NJ0 A;  3RT2 A;  4JDA A;  4IGY A;  5JO1 A;  3H3R A;  5E46 A;  2QIM A;  3H3T A;  4R7K A;  3NMN A;  3Q63 A;  4C9I A;  2LGH A;  3OJI A;  3P0L A;  4BTZ A;  3TFZ A;  3P9V A;  4A80 A;  1XN6 A;  3NMV A;  2LF2 A;  2L9P A;  3NEF A;  1T27 A;  2LEQ A;  2R55 A;  2VQ5 A;  1LN1 A;  2Z9Y A;  3K3K A;  2IL5 A;  3NMP A;  2I9Y A;  3P51 A;  3OQU A;  3KL1 A;  4A84 A;  4A88 A;  4REI A;  3W9R A;  1X53 A;  1ICX A;  2A1L A;  2FLH A;  3NS2 A;  2K5G A;  3NMH A;  2GKD A;  2LCG A;  1UW5 A;  1XN5 A;  1TXC A;  3CNW A;  4FPW A;  5E4D A;  3UJL A;  4QIP A;  3E85 A;  2LDK A;  1FSK A;  5AMW A;  2REZ A;  3KDH A;  2E3P A;  4C94 A;  4A86 A;  3FO5 A;  4Z3L A;  3TL1 A;  1QMR A;  1XFS A;  3F08 A;  4A87 A;  2E3S A;  2FFS A;  2NS9 A;  3TVR A;  2LIO A;  1B6F A;  1EM2 A;  2LAK A;  2M89 A;  3RD6 A;  3NJ1 A;  2E3R A;  2E3M A;  2LUZ A;  3OH8 A;  2PSO A;  4JDL A;  5E4M A;  3NR4 A;  3UID A;  2M47 A;  4LGA A;  3NEG A;  4JHG A;  3UQH A;  3OTL A;  4DS8 A;  1BTV A;  4A8U A;  2E3N A;  1IFV A;  1Z94 A;  2E3O A;  4MNS A;  2K7H A;  3WG8 A;  1LN3 A;  4MA6 A;  1LLT A;  3Q6A A;  4REH A;  2MOU A;  4C9C A;  4OIC A;  4GY9 A;  4PSB A;  4LA7 A;  4A8G A;  4LG5 A;  4DSB A;  3KAZ A; 
#chains in the Genus database with same CATH topology
 1XDF A;  3HM9 A;  3KB0 A;  4IH0 A;  4M9W A;  1T17 A;  3JRQ B;  4JHH A;  4IGX A;  3QSZ A;  3IJT A;  3PU2 A;  4N0G C;  4A83 A;  1JSS A;  4Y31 A;  2LE1 A;  3NMT A;  1H2O A;  3GGN A;  2LAF A;  3K90 A;  4JHI A;  5E4B A;  1LN2 A;  2PCS A;  3NI8 A;  4KPY A;  1FM4 A;  4RYV A;  4BK7 A;  4WVO A;  2D4R A;  2YH6 A;  2VNE A;  4QDC A;  4IH2 A;  2ZYL A;  2EJX A;  4JHY A;  4B9R A;  5JO2 A;  3KAY A;  3KB3 A;  3ZVU A;  1XUV A;  4QDF B;  4BKC A;  1E09 A;  3NQN A;  5I9J A;  2RES A;  4REJ A;  1KCM A;  2WQL A;  3Q64 A;  3H3Q A;  3JRS A;  3NJO A;  3ELI A;  4XRT A;  2KF2 A;  4IHR A;  4A81 A;  2N4B A;  2BK0 A;  4A85 A;  3HK2 A;  4QDD A;  3RT0 C;  1VJH A;  3H3S A;  1TW0 A;  3GL0 A;  2NN5 A;  4N3E A;  3KDI A;  3KDJ A;  2KCZ A;  3KLX A;  3R6P A;  4E6F A;  2Q3Q A;  4Q0K A;  5BRL A;  1BV1 A;  3W9K A;  4IGV A;  2E3Q A;  5I8F A;  4M9B A;  5EKQ C;  2L8O A;  2RER A;  4DSC A;  2KTE A;  3C0V A;  5JNN A;  3GOB A;  3HO1 A;  2Z9Z A;  4BKD A;  4LGB A;  1ZXF A;  2N4A A;  4XRW A;  3PUT A;  2L65 A;  4A8V A;  4BK6 A;  3TVQ A;  4N76 A;  2LPX A;  4IGW A;  4MAP A;  3QN1 A;  5C9Y A;  2QPV A;  4QDF A;  2KEW A;  3IE5 A;  3NJ0 A;  3GB4 A;  3RT2 A;  4JDA A;  4IGY A;  3F73 A;  5JO1 A;  3H3R A;  5E46 A;  3GTE A;  2QIM A;  3H3T A;  4R7K A;  3NMN A;  3Q63 A;  4C9I A;  2LGH A;  3OJI A;  3P0L A;  4BTZ A;  3TFZ A;  3P9V A;  4A80 A;  1XN6 A;  3NMV A;  3HJF A;  2LF2 A;  4QCK A;  2L9P A;  3NEF A;  1T27 A;  2LEQ A;  2R55 A;  2VQ5 A;  4NCB A;  1LN1 A;  2Z9Y A;  3K3K A;  2IL5 A;  3NMP A;  2I9Y A;  3P51 A;  3OQU A;  3KL1 A;  4A84 A;  4A88 A;  4REI A;  3W9R A;  1X53 A;  1ICX A;  2A1L A;  2FLH A;  3GTS A;  2K5G A;  3NMH A;  3NS2 A;  2LCG A;  2GKD A;  1UW5 A;  1XN5 A;  1TXC A;  3CNW A;  4FPW A;  5E4D A;  3UJL A;  4QIP A;  3DLB A;  4N41 A;  3E85 A;  3HXM A;  2LDK A;  1FSK A;  5AMW A;  2REZ A;  3KDH A;  2E3P A;  4C94 A;  3DLH A;  4A86 A;  3FO5 A;  4Z3L A;  3TL1 A;  1QMR A;  1XFS A;  3F08 A;  4A87 A;  2E3S A;  2FFS A;  2NS9 A;  3GL2 A;  4NCA A;  3TVR A;  3HVR A;  2LIO A;  3GKE A;  1B6F A;  1EM2 A;  2LAK A;  2M89 A;  3RD6 A;  3NJ1 A;  2E3R A;  2E3M A;  2LUZ A;  3OH8 A;  3TGO C;  2PSO A;  4JDL A;  5E4M A;  3NR4 A;  3UID A;  2M47 A;  4LGA A;  3NEG A;  4JHG A;  3UQH A;  3OTL A;  4DS8 A;  1BTV A;  4N47 A;  4A8U A;  2E3N A;  1IFV A;  1Z94 A;  2E3O A;  4MNS A;  2K7H A;  3WG8 A;  1LN3 A;  4MA6 A;  1LLT A;  3Q6A A;  4REH A;  2MOU A;  4C9C A;  4OIC A;  4GY9 A;  4PSB A;  4LA7 A;  4A8G A;  4LG5 A;  4DSB A;  3KAZ A; 
#chains in the Genus database with same CATH homology
 1XDF A;  3HM9 A;  3KB0 A;  4IH0 A;  4M9W A;  1T17 A;  3JRQ B;  4JHH A;  4IGX A;  3QSZ A;  3IJT A;  3PU2 A;  4N0G C;  4A83 A;  1JSS A;  4Y31 A;  2LE1 A;  3NMT A;  1H2O A;  3GGN A;  2LAF A;  3K90 A;  4JHI A;  5E4B A;  1LN2 A;  2PCS A;  3NI8 A;  4KPY A;  1FM4 A;  4RYV A;  4BK7 A;  4WVO A;  2D4R A;  2YH6 A;  2VNE A;  4QDC A;  4IH2 A;  2ZYL A;  2EJX A;  4JHY A;  4B9R A;  5JO2 A;  3KAY A;  3KB3 A;  3ZVU A;  1XUV A;  4QDF B;  4BKC A;  1E09 A;  3NQN A;  5I9J A;  2RES A;  4REJ A;  1KCM A;  2WQL A;  3Q64 A;  3H3Q A;  3JRS A;  3NJO A;  3ELI A;  4XRT A;  2KF2 A;  4IHR A;  4A81 A;  2N4B A;  2BK0 A;  4A85 A;  3HK2 A;  4QDD A;  3RT0 C;  1VJH A;  3H3S A;  1TW0 A;  3GL0 A;  2NN5 A;  4N3E A;  3KDI A;  3KDJ A;  2KCZ A;  3KLX A;  3R6P A;  4E6F A;  2Q3Q A;  4Q0K A;  5BRL A;  1BV1 A;  3W9K A;  4IGV A;  2E3Q A;  5I8F A;  4M9B A;  5EKQ C;  2L8O A;  2RER A;  4DSC A;  2KTE A;  3C0V A;  5JNN A;  3GOB A;  3HO1 A;  2Z9Z A;  4BKD A;  4LGB A;  1ZXF A;  2N4A A;  4XRW A;  3PUT A;  2L65 A;  4A8V A;  4BK6 A;  3TVQ A;  4N76 A;  2LPX A;  4IGW A;  4MAP A;  3QN1 A;  5C9Y A;  2QPV A;  4QDF A;  2KEW A;  3IE5 A;  3NJ0 A;  3GB4 A;  3RT2 A;  4JDA A;  4IGY A;  3F73 A;  5JO1 A;  3H3R A;  5E46 A;  3GTE A;  2QIM A;  3H3T A;  4R7K A;  3NMN A;  3Q63 A;  4C9I A;  2LGH A;  3OJI A;  3P0L A;  4BTZ A;  3TFZ A;  3P9V A;  4A80 A;  1XN6 A;  3NMV A;  3HJF A;  2LF2 A;  4QCK A;  2L9P A;  3NEF A;  1T27 A;  2LEQ A;  2R55 A;  2VQ5 A;  4NCB A;  1LN1 A;  2Z9Y A;  3K3K A;  2IL5 A;  3NMP A;  2I9Y A;  3P51 A;  3OQU A;  3KL1 A;  4A84 A;  4A88 A;  4REI A;  3W9R A;  1X53 A;  1ICX A;  2A1L A;  2FLH A;  3GTS A;  2K5G A;  3NMH A;  3NS2 A;  2LCG A;  2GKD A;  1UW5 A;  1XN5 A;  1TXC A;  3CNW A;  4FPW A;  5E4D A;  3UJL A;  4QIP A;  3DLB A;  4N41 A;  3E85 A;  3HXM A;  2LDK A;  1FSK A;  5AMW A;  2REZ A;  3KDH A;  2E3P A;  4C94 A;  3DLH A;  4A86 A;  3FO5 A;  4Z3L A;  3TL1 A;  1QMR A;  1XFS A;  3F08 A;  4A87 A;  2E3S A;  2FFS A;  2NS9 A;  3GL2 A;  4NCA A;  3TVR A;  3HVR A;  2LIO A;  3GKE A;  1B6F A;  1EM2 A;  2LAK A;  2M89 A;  3RD6 A;  3NJ1 A;  2E3R A;  2E3M A;  2LUZ A;  3OH8 A;  3TGO C;  2PSO A;  4JDL A;  5E4M A;  3NR4 A;  3UID A;  2M47 A;  4LGA A;  3NEG A;  4JHG A;  3UQH A;  3OTL A;  4DS8 A;  1BTV A;  4N47 A;  4A8U A;  2E3N A;  1IFV A;  1Z94 A;  2E3O A;  4MNS A;  2K7H A;  3WG8 A;  1LN3 A;  4MA6 A;  1LLT A;  3Q6A A;  4REH A;  2MOU A;  4C9C A;  4OIC A;  4GY9 A;  4PSB A;  4LA7 A;  4A8G A;  4LG5 A;  4DSB A;  3KAZ A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

3NJ0A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations