3UJL | Genus

Total Genus 42

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	42
sequence length	176
structure length	176
Chain Sequence	SEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSAPMHD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Signaling protein
source organism	Arabidopsis thaliana
publication title	Molecular mimicry regulates ABA signaling by SnRK2 kinases and PP2C phosphatases. pubmed doi rcsb
molecule keywords	Abscisic acid receptor PYL2
total genus	42
structure length	176
sequence length	176
ec nomenclature
pdb deposition date	2011-11-07

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF10604	Polyketide_cyc2	Polyketide cyclase / dehydrase and lipid transport

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4	3ujlA00

4Y31A 3OH8A 2VQ5A 4JHGA 3F08A 4XRTA 1ZXFA 1T27A 3RD6A 2N4AA 4A85A 3FO5A 4BKDA 3KL1A 4RYVA 3Q6AA 3P0LA 4GY9A 3NR4A 3TVRA 3C0VA 3KDJA 3NMPA 3UJLA 4A8VA 3KAZA 3GGNA 3KB3A 1KCMA 2KEWA 1E09A 1X53A 4LA7A 4LGBA 5E46A 2LPXA 2R55A 1B6FA 2LF2A 1XN6A 2Z9YA 3H3RA 4BTZA 5JO2A 2E3QA 2K5GA 4MNSA 2LUZA 2NN5A 1XUVA 3W9KA 5I8FA 4C9IA 4A87A 3IE5A 1FSKA 4MAPA 1FM4A 4Q0KA 3RT2A 1TXCA 2E3MA 2KCZA 4A8UA 1JSSA 3H3TA 4IGYA 4B9RA 3JRSA 2NS9A 3OJIA 3NEFA 3NS2A 3NMHA 1LN3A 4A83A 4C94A 4BK7A 2LGHA 2BK0A 5E4BA 4IGWA 1UW5A 2I9YA 3TL1A 4XRWA 3CNWA 2QIMA 3Q64A 4MA6A 2FFSA 2RESA 3TVQA 4Z3LA 3NJOA 5I9JA 3PUTA 1IFVA 2LAKA 2LDKA 3NEGA 2EJXA 1H2OA 2M47A 2K7HA 2PSOA 2KTEA 2L8OA 4JHHA 4REIA 5AMWA 3NMNA 5BRLA 3WG8A 2LCGA 4A86A 3P9VA 2D4RA 4REJA 4A8GA 3UQHA 5E4DA 3K90A 3H3QA 2QPVA 4JDLA 3JRQB 4IHRA 3K3KA 2L9PA 2M89A 3ELIA 3TFZA 3NJ0A 4IGVA 4LGAA 2IL5A 1VJHA 3KB0A 4IH0A 3OQUA 4WVOA 4A80A 2LE1A 5JNNA 3KLXA 3W9RA 2A1LA 4BK6A 4FPWA 3PU2A 4R7KA 4N0GC 3NJ1A 3KAYA 3NI8A 3QSZA 3RT0C 2VNEA 3KDIA 4M9WA 2N4BA 2Z9ZA 2WQLA 4OICA 4IH2A 1LN2A 4DSBA 4DSCA 4REHA 2LEQA 2KF2A 5C9YA 2FLHA 2MOUA 3ZVUA 2E3NA 2LIOA 4DS8A 1EM2A 3NMTA 4A88A 2Q3QA 5E4MA 1LN1A 1LLTA 4A84A 3OTLA 2PCSA 3NMVA 4IGXA 1Z94A 2E3PA 3H3SA 2RERA 3KDHA 2E3SA 3QN1A 1TW0A 3P51A 1XDFA 2E3RA 3R6PA 1XN5A 1BV1A 5JO1A 4C9CA 2REZA 4BKCA 2L65A 3UIDA 4QIPA 1T17A 4N3EA 2GKDA 1BTVA 3E85A 3Q63A 4JHIA 2E3OA 4LG5A 1QMRA 4A81A 1XFSA 4JDAA 1ICXA 4M9BA 4PSBA 3IJTA
chains in the Genus database with same CATH superfamily

2YH6A 4Y31A 3OH8A 2VQ5A 4JHGA 3F08A 4XRTA 3GL2A 3HXMA 1ZXFA 1T27A 3RD6A 2N4AA 4A85A 3FO5A 4QDFB 3KL1A 4RYVA 4BKDA 3Q6AA 4N41A 3P0LA 4GY9A 3HVRA 3NR4A 4NCBA 3GTSA 3C0VA 3KDJA 3NMPA 3TVRA 3UJLA 3KAZA 4A8VA 3GGNA 3DLHA 3KB3A 1KCMA 3HK2A 2KEWA 1E09A 1X53A 4LA7A 4LGBA 5E46A 2LPXA 4E6FA 2R55A 1B6FA 2LF2A 1XN6A 2Z9YA 3H3RA 4BTZA 5JO2A 2E3QA 2K5GA 4MNSA 2LUZA 2NN5A 1XUVA 3W9KA 3GL0A 5I8FA 4C9IA 4A87A 3IE5A 1FSKA 4MAPA 1FM4A 4Q0KA 4N47A 3RT2A 1TXCA 2E3MA 2KCZA 3TGOC 4A8UA 1JSSA 3H3TA 4IGYA 4B9RA 3JRSA 2NS9A 3OJIA 3NEFA 3NQNA 3NMHA 3NS2A 1LN3A 4A83A 4C94A 4BK7A 2LGHA 3F73A 2BK0A 5E4BA 5EKQC 4IGWA 1UW5A 2I9YA 3TL1A 4XRWA 3CNWA 2QIMA 3Q64A 4MA6A 2FFSA 2RESA 2ZYLA 3TVQA 3NJOA 5I9JA 4Z3LA 3GOBA 3PUTA 1IFVA 2LAKA 2LDKA 3NEGA 2EJXA 1H2OA 2M47A 2K7HA 2PSOA 3HM9A 2KTEA 2L8OA 4JHHA 4REIA 5AMWA 3NMNA 5BRLA 3WG8A 3GKEA 2LCGA 4A86A 3P9VA 4NCAA 2D4RA 4REJA 4N76A 4A8GA 3UQHA 5E4DA 3K90A 3H3QA 4QDFA 2QPVA 4JDLA 3JRQB 4IHRA 3K3KA 2L9PA 2M89A 3ELIA 3TFZA 3NJ0A 4IGVA 4LGAA 2IL5A 2LAFA 1VJHA 3HO1A 3KB0A 4IH0A 3OQUA 4WVOA 3DLBA 4JHYA 4A80A 2LE1A 5JNNA 3KLXA 3W9RA 2A1LA 4BK6A 4FPWA 3PU2A 4R7KA 4N0GC 3NJ1A 3KAYA 3NI8A 3QSZA 3RT0C 2VNEA 3KDIA 4M9WA 2N4BA 2Z9ZA 2WQLA 4OICA 4IH2A 1LN2A 4DSBA 4DSCA 4REHA 2LEQA 2KF2A 5C9YA 2FLHA 2MOUA 3HJFA 3ZVUA 2E3NA 2LIOA 4DS8A 1EM2A 3NMTA 4A88A 2Q3QA 4QCKA 5E4MA 1LN1A 1LLTA 4A84A 3OTLA 2PCSA 3NMVA 4IGXA 1Z94A 2E3PA 3GTEA 3H3SA 2RERA 3KDHA 2E3SA 3QN1A 1TW0A 3P51A 1XDFA 2E3RA 3R6PA 3GB4A 1XN5A 1BV1A 5JO1A 4C9CA 2REZA 4BKCA 2L65A 3UIDA 4QIPA 1T17A 4N3EA 2GKDA 1BTVA 4KPYA 3E85A 3Q63A 4JHIA 2E3OA 4LG5A 4QDCA 1QMRA 4A81A 1XFSA 4QDDA 4JDAA 1ICXA 4M9BA 4PSBA 3IJTA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 4Y31 A;  3OH8 A;  2VQ5 A;  4JHG A;  3F08 A;  4XRT A;  1ZXF A;  1T27 A;  3RD6 A;  2N4A A;  4A85 A;  3FO5 A;  4BKD A;  3KL1 A;  4RYV A;  3Q6A A;  3P0L A;  4GY9 A;  3NR4 A;  3TVR A;  3C0V A;  3KDJ A;  3NMP A;  3UJL A;  4A8V A;  3KAZ A;  3GGN A;  3KB3 A;  1KCM A;  2KEW A;  1E09 A;  1X53 A;  4LA7 A;  4LGB A;  5E46 A;  2LPX A;  2R55 A;  1B6F A;  2LF2 A;  1XN6 A;  2Z9Y A;  3H3R A;  4BTZ A;  5JO2 A;  2E3Q A;  2K5G A;  4MNS A;  2LUZ A;  2NN5 A;  1XUV A;  3W9K A;  5I8F A;  4C9I A;  4A87 A;  3IE5 A;  1FSK A;  4MAP A;  1FM4 A;  4Q0K A;  3RT2 A;  1TXC A;  2E3M A;  2KCZ A;  4A8U A;  1JSS A;  3H3T A;  4IGY A;  4B9R A;  3JRS A;  2NS9 A;  3OJI A;  3NEF A;  3NS2 A;  3NMH A;  1LN3 A;  4A83 A;  4C94 A;  4BK7 A;  2LGH A;  2BK0 A;  5E4B A;  4IGW A;  1UW5 A;  2I9Y A;  3TL1 A;  4XRW A;  3CNW A;  2QIM A;  3Q64 A;  4MA6 A;  2FFS A;  2RES A;  3TVQ A;  4Z3L A;  3NJO A;  5I9J A;  3PUT A;  1IFV A;  2LAK A;  2LDK A;  3NEG A;  2EJX A;  1H2O A;  2M47 A;  2K7H A;  2PSO A;  2KTE A;  2L8O A;  4JHH A;  4REI A;  5AMW A;  3NMN A;  5BRL A;  3WG8 A;  2LCG A;  4A86 A;  3P9V A;  2D4R A;  4REJ A;  4A8G A;  3UQH A;  5E4D A;  3K90 A;  3H3Q A;  2QPV A;  4JDL A;  3JRQ B;  4IHR A;  3K3K A;  2L9P A;  2M89 A;  3ELI A;  3TFZ A;  3NJ0 A;  4IGV A;  4LGA A;  2IL5 A;  1VJH A;  3KB0 A;  4IH0 A;  3OQU A;  4WVO A;  4A80 A;  2LE1 A;  5JNN A;  3KLX A;  3W9R A;  2A1L A;  4BK6 A;  4FPW A;  3PU2 A;  4R7K A;  4N0G C;  3NJ1 A;  3KAY A;  3NI8 A;  3QSZ A;  3RT0 C;  2VNE A;  3KDI A;  4M9W A;  2N4B A;  2Z9Z A;  2WQL A;  4OIC A;  4IH2 A;  1LN2 A;  4DSB A;  4DSC A;  4REH A;  2LEQ A;  2KF2 A;  5C9Y A;  2FLH A;  2MOU A;  3ZVU A;  2E3N A;  2LIO A;  4DS8 A;  1EM2 A;  3NMT A;  4A88 A;  2Q3Q A;  5E4M A;  1LN1 A;  1LLT A;  4A84 A;  3OTL A;  2PCS A;  3NMV A;  4IGX A;  1Z94 A;  2E3P A;  3H3S A;  2RER A;  3KDH A;  2E3S A;  3QN1 A;  1TW0 A;  3P51 A;  1XDF A;  2E3R A;  3R6P A;  1XN5 A;  1BV1 A;  5JO1 A;  4C9C A;  2REZ A;  4BKC A;  2L65 A;  3UID A;  4QIP A;  1T17 A;  4N3E A;  2GKD A;  1BTV A;  3E85 A;  3Q63 A;  4JHI A;  2E3O A;  4LG5 A;  1QMR A;  4A81 A;  1XFS A;  4JDA A;  1ICX A;  4M9B A;  4PSB A;  3IJT A; 
#chains in the Genus database with same CATH topology
 2YH6 A;  4Y31 A;  3OH8 A;  2VQ5 A;  4JHG A;  3F08 A;  4XRT A;  3GL2 A;  3HXM A;  1ZXF A;  1T27 A;  3RD6 A;  2N4A A;  4A85 A;  3FO5 A;  4QDF B;  3KL1 A;  4RYV A;  4BKD A;  3Q6A A;  4N41 A;  3P0L A;  4GY9 A;  3HVR A;  3NR4 A;  4NCB A;  3GTS A;  3C0V A;  3KDJ A;  3NMP A;  3TVR A;  3UJL A;  3KAZ A;  4A8V A;  3GGN A;  3DLH A;  3KB3 A;  1KCM A;  3HK2 A;  2KEW A;  1E09 A;  1X53 A;  4LA7 A;  4LGB A;  5E46 A;  2LPX A;  4E6F A;  2R55 A;  1B6F A;  2LF2 A;  1XN6 A;  2Z9Y A;  3H3R A;  4BTZ A;  5JO2 A;  2E3Q A;  2K5G A;  4MNS A;  2LUZ A;  2NN5 A;  1XUV A;  3W9K A;  3GL0 A;  5I8F A;  4C9I A;  4A87 A;  3IE5 A;  1FSK A;  4MAP A;  1FM4 A;  4Q0K A;  4N47 A;  3RT2 A;  1TXC A;  2E3M A;  2KCZ A;  3TGO C;  4A8U A;  1JSS A;  3H3T A;  4IGY A;  4B9R A;  3JRS A;  2NS9 A;  3OJI A;  3NEF A;  3NQN A;  3NMH A;  3NS2 A;  1LN3 A;  4A83 A;  4C94 A;  4BK7 A;  2LGH A;  3F73 A;  2BK0 A;  5E4B A;  5EKQ C;  4IGW A;  1UW5 A;  2I9Y A;  3TL1 A;  4XRW A;  3CNW A;  2QIM A;  3Q64 A;  4MA6 A;  2FFS A;  2RES A;  2ZYL A;  3TVQ A;  3NJO A;  5I9J A;  4Z3L A;  3GOB A;  3PUT A;  1IFV A;  2LAK A;  2LDK A;  3NEG A;  2EJX A;  1H2O A;  2M47 A;  2K7H A;  2PSO A;  3HM9 A;  2KTE A;  2L8O A;  4JHH A;  4REI A;  5AMW A;  3NMN A;  5BRL A;  3WG8 A;  3GKE A;  2LCG A;  4A86 A;  3P9V A;  4NCA A;  2D4R A;  4REJ A;  4N76 A;  4A8G A;  3UQH A;  5E4D A;  3K90 A;  3H3Q A;  4QDF A;  2QPV A;  4JDL A;  3JRQ B;  4IHR A;  3K3K A;  2L9P A;  2M89 A;  3ELI A;  3TFZ A;  3NJ0 A;  4IGV A;  4LGA A;  2IL5 A;  2LAF A;  1VJH A;  3HO1 A;  3KB0 A;  4IH0 A;  3OQU A;  4WVO A;  3DLB A;  4JHY A;  4A80 A;  2LE1 A;  5JNN A;  3KLX A;  3W9R A;  2A1L A;  4BK6 A;  4FPW A;  3PU2 A;  4R7K A;  4N0G C;  3NJ1 A;  3KAY A;  3NI8 A;  3QSZ A;  3RT0 C;  2VNE A;  3KDI A;  4M9W A;  2N4B A;  2Z9Z A;  2WQL A;  4OIC A;  4IH2 A;  1LN2 A;  4DSB A;  4DSC A;  4REH A;  2LEQ A;  2KF2 A;  5C9Y A;  2FLH A;  2MOU A;  3HJF A;  3ZVU A;  2E3N A;  2LIO A;  4DS8 A;  1EM2 A;  3NMT A;  4A88 A;  2Q3Q A;  4QCK A;  5E4M A;  1LN1 A;  1LLT A;  4A84 A;  3OTL A;  2PCS A;  3NMV A;  4IGX A;  1Z94 A;  2E3P A;  3GTE A;  3H3S A;  2RER A;  3KDH A;  2E3S A;  3QN1 A;  1TW0 A;  3P51 A;  1XDF A;  2E3R A;  3R6P A;  3GB4 A;  1XN5 A;  1BV1 A;  5JO1 A;  4C9C A;  2REZ A;  4BKC A;  2L65 A;  3UID A;  4QIP A;  1T17 A;  4N3E A;  2GKD A;  1BTV A;  4KPY A;  3E85 A;  3Q63 A;  4JHI A;  2E3O A;  4LG5 A;  4QDC A;  1QMR A;  4A81 A;  1XFS A;  4QDD A;  4JDA A;  1ICX A;  4M9B A;  4PSB A;  3IJT A; 
#chains in the Genus database with same CATH homology
 2YH6 A;  4Y31 A;  3OH8 A;  2VQ5 A;  4JHG A;  3F08 A;  4XRT A;  3GL2 A;  3HXM A;  1ZXF A;  1T27 A;  3RD6 A;  2N4A A;  4A85 A;  3FO5 A;  4QDF B;  3KL1 A;  4RYV A;  4BKD A;  3Q6A A;  4N41 A;  3P0L A;  4GY9 A;  3HVR A;  3NR4 A;  4NCB A;  3GTS A;  3C0V A;  3KDJ A;  3NMP A;  3TVR A;  3UJL A;  3KAZ A;  4A8V A;  3GGN A;  3DLH A;  3KB3 A;  1KCM A;  3HK2 A;  2KEW A;  1E09 A;  1X53 A;  4LA7 A;  4LGB A;  5E46 A;  2LPX A;  4E6F A;  2R55 A;  1B6F A;  2LF2 A;  1XN6 A;  2Z9Y A;  3H3R A;  4BTZ A;  5JO2 A;  2E3Q A;  2K5G A;  4MNS A;  2LUZ A;  2NN5 A;  1XUV A;  3W9K A;  3GL0 A;  5I8F A;  4C9I A;  4A87 A;  3IE5 A;  1FSK A;  4MAP A;  1FM4 A;  4Q0K A;  4N47 A;  3RT2 A;  1TXC A;  2E3M A;  2KCZ A;  3TGO C;  4A8U A;  1JSS A;  3H3T A;  4IGY A;  4B9R A;  3JRS A;  2NS9 A;  3OJI A;  3NEF A;  3NQN A;  3NMH A;  3NS2 A;  1LN3 A;  4A83 A;  4C94 A;  4BK7 A;  2LGH A;  3F73 A;  2BK0 A;  5E4B A;  5EKQ C;  4IGW A;  1UW5 A;  2I9Y A;  3TL1 A;  4XRW A;  3CNW A;  2QIM A;  3Q64 A;  4MA6 A;  2FFS A;  2RES A;  2ZYL A;  3TVQ A;  3NJO A;  5I9J A;  4Z3L A;  3GOB A;  3PUT A;  1IFV A;  2LAK A;  2LDK A;  3NEG A;  2EJX A;  1H2O A;  2M47 A;  2K7H A;  2PSO A;  3HM9 A;  2KTE A;  2L8O A;  4JHH A;  4REI A;  5AMW A;  3NMN A;  5BRL A;  3WG8 A;  3GKE A;  2LCG A;  4A86 A;  3P9V A;  4NCA A;  2D4R A;  4REJ A;  4N76 A;  4A8G A;  3UQH A;  5E4D A;  3K90 A;  3H3Q A;  4QDF A;  2QPV A;  4JDL A;  3JRQ B;  4IHR A;  3K3K A;  2L9P A;  2M89 A;  3ELI A;  3TFZ A;  3NJ0 A;  4IGV A;  4LGA A;  2IL5 A;  2LAF A;  1VJH A;  3HO1 A;  3KB0 A;  4IH0 A;  3OQU A;  4WVO A;  3DLB A;  4JHY A;  4A80 A;  2LE1 A;  5JNN A;  3KLX A;  3W9R A;  2A1L A;  4BK6 A;  4FPW A;  3PU2 A;  4R7K A;  4N0G C;  3NJ1 A;  3KAY A;  3NI8 A;  3QSZ A;  3RT0 C;  2VNE A;  3KDI A;  4M9W A;  2N4B A;  2Z9Z A;  2WQL A;  4OIC A;  4IH2 A;  1LN2 A;  4DSB A;  4DSC A;  4REH A;  2LEQ A;  2KF2 A;  5C9Y A;  2FLH A;  2MOU A;  3HJF A;  3ZVU A;  2E3N A;  2LIO A;  4DS8 A;  1EM2 A;  3NMT A;  4A88 A;  2Q3Q A;  4QCK A;  5E4M A;  1LN1 A;  1LLT A;  4A84 A;  3OTL A;  2PCS A;  3NMV A;  4IGX A;  1Z94 A;  2E3P A;  3GTE A;  3H3S A;  2RER A;  3KDH A;  2E3S A;  3QN1 A;  1TW0 A;  3P51 A;  1XDF A;  2E3R A;  3R6P A;  3GB4 A;  1XN5 A;  1BV1 A;  5JO1 A;  4C9C A;  2REZ A;  4BKC A;  2L65 A;  3UID A;  4QIP A;  1T17 A;  4N3E A;  2GKD A;  1BTV A;  4KPY A;  3E85 A;  3Q63 A;  4JHI A;  2E3O A;  4LG5 A;  4QDC A;  1QMR A;  4A81 A;  1XFS A;  4QDD A;  4JDA A;  1ICX A;  4M9B A;  4PSB A;  3IJT A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

3UJLA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations