1BRD | Genus

Total Genus 67

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	67
sequence length	218
structure length	170
Chain Sequence	PEWIWLALGTALMGLGTLYFLVKGMDAKKFYAITTLVPAIAFTMYLSMLLEQNPIYWARYADWLFTTPLLLLDLALLGTILALVGADGIMIGTGLVGALWWAISTAAMLYILYVLFFGFTEVASTFKVLRNVTVVLWSAYPVVWLINIETLLFMVLDVSAKVGFGLILLR

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__746783739235441__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__746783739235441__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/1BRD/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__746783739235441__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"746783739235441","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/1BRD/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__746783739235441__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Photoreceptor
source organism	Halobacterium salinarum
publication title	Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. pubmed doi rcsb
molecule keywords	BACTERIORHODOPSIN PRECURSOR
total genus	67
structure length	170
sequence length	218
ec nomenclature
pdb deposition date	1990-05-23

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01036	Bac_rhodopsin	Bacteriorhodopsin-like protein

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhopdopsin 7-helix transmembrane proteins	1brdA00

2Y03A 4XT3A 3PBLA 3V2YA 4N4YB 5AWZA 1QKOA 5J7AA 5H2NA 2QPDB 1KGBA 1FBBA 1P8IA 2NTUA 3ODUA 4G71B 3PDSA 5H2JA 2I20A 2ZIYA 4XXJA 1F4ZA 2YCZA 4MD1A 3DQBA 4L6RA 3UTWA 3PWHA 4JKVA 4IAQA 1QM8A 3C9LA 3D4SA 4EIYA 1M0KA 4QI1A 4G72B 3EH5B 1VJMA 1H2SA 2I35A 4DJHA 5B0WA 2YCYA 5AX0A 1JV7A 2X72A 2F95A 3QJTB 4GPOA 5B6WA 5AHZA 1JFPA 1S51A 3MBVA 3X3CA 5B6VA 2F93A 5G36A 1UCQA 3UTVA 4OV0A 4MQTA 2JAGA 4KNFA 1EHKB 3NY8A 3SN6R 4MD2A 4XTLA 5H2OA 1M0MA 3QJUB 2YCWA 5JJEA 4BVNA 4BV0A 4FBZA 1DZEA 1GU8A 1C8SA 1M0LA 1MGYA 4N4WA 5G54A 4LDLA 3S3BB 2Z55A 5AZDA 3CODA 1KG9A 2VT4A 3C9MA 5TGZA 2ZFEA 3QDCA 1JV6A 3PQRA 3P0GA 4LDOA 2LNLA 1F50A 1BM1A 5B6ZA 4HWLA 3VW7A 3V2WA 2KS9A 3HARA 1AT9A 2Y02A 1TN5A 5DYSA 4A4MA 1PXRA 5A44A 2KSBA 3QBIA 4PXKA 4FPDA 1KMEA 5ITEA 1F88A 2RH1A 3HAQA 5H2MA 1KG8A 1JGJA 3UG9A 4X1HA 2YDVA 4NC3A 5H2PA 4N6HA 3VI0A 3UZAA 1C8RA 4BWBA 4J4QA 5KKHA 1FBKA 2JAFA 3KJ6A 3ZEVA 5H2KA 4JR8A 4K5YA 1X0SA 4GRVA 2G87A 2WJLA 3VG9A 5F8UA 5LWEA 2PEDA 4FAAB 4MQSA 5B34A 2R4SA 4FA7B 4MBSA 3OAXA 4WAVA 5G28A 3QJRB 1R2NA 1P8HA 3CAPA 5B35A 1XMEB 2KSAA 3REYA 2I21A 1CWQA 4BEYA 4GP8B 5A45A 2I1XA 3QAKA 3QJVB 4XTNA 3ZPRA 1H68A 4IB4A 3OE9A 5ITCA 5ETZA 5DHGA 2M3GA 1UAZA 4X31A 2ZZLA 1TN0A 1HZXA 1GZMA 2EI4A 3ZPQA 1Q5IA 5B6YA 1S53A 4GYCA 3EH3B 1BRDA 3QBKA 1E0PA 4G7QB 4TL3A 4EJ4A 4UHRA 3NS0A 1X0K1 3UONA 2QPEB 4HYJA 3EMLA 3HAPA 1X0I1 2Y04A 1C3WA 1IXFA 3NSBA 3NYAA 4GBRA 4AMJA 3COCA 3AYMA 3UTXA 1S8JA 4IARA 5AX1A 1P8UA 4PXFA 4AMIA 5H2IA 1BRXA 3WQJA 1XJIA 3OE0A 1L9HA 4HYXA 3HASA 5B2NA 5A8EA 2AT9A 5G2AA 3OE6A 1PXSA 4DKLA 3OE8A 2WJKA 3UTYA 2Z73A 3RFMA 4GP4B 5EN0A 5G2DA 5BR5A 3DDLA 5B6XA 4XTOA 3S8FB 5JJNA 5C1MA 2YCXA 3RZEA 3S3CB 3QJSB 1IW9A 3A7KA 5DHHA 1IW6A 1QKPA 2Y00A 4GP5B 4UG2A 4BUOA 4QIDA 3VHZA 1AP9A 3VGAA 3QBGA 1S8LA 2R4RA 5BR2A 4G7SB 1S54A 5H2LA 3QAPA 1O0AA 4G7RB 1GUEA 1XIOA 4KLYA 3X3BA 4X32A 3T45A 4G70B 5G53A 1U19A 3PXOA 1L0MA 3BVDB 1S52A 3ABWA 4EA3A 5H2HA 4JQ6A 3HAOA 3AYNA 4LDEA 4BEZA 2KSYA 3NY9A 3VVKA 2NTWA 4Y9HA 1LN6A 2L6XA 1BRRA 3QJQB 4QRYA 2BRDA 1QHJA 1PY6A 2Y01A 3HANA 3AM6A 4WW3A 5FJGA 4L35A 3QBLA 3S8GB 2J4YA 2YDOA 5AHYA 4DAJA 3S3DB 1R84A 1Q5JA 1E12A 2HPYA 5JJJA 3UZCA 3EH4B 1VGOA 5G2CA 4XT1A
chains in the Genus database with same CATH superfamily

2Y03A 4XT3A 3PBLA 3V2YA 4N4YB 5AWZA 1QKOA 5J7AA 5H2NA 2QPDB 1KGBA 1FBBA 1P8IA 2NTUA 3ODUA 4G71B 3PDSA 5H2JA 2I20A 2ZIYA 4XXJA 1F4ZA 2YCZA 4MD1A 3DQBA 4L6RA 3UTWA 3PWHA 4JKVA 4IAQA 1QM8A 3C9LA 3D4SA 4EIYA 1M0KA 4QI1A 4G72B 3EH5B 1VJMA 1H2SA 2I35A 4DJHA 5B0WA 2YCYA 5AX0A 1JV7A 2X72A 2F95A 3QJTB 4GPOA 5B6WA 5AHZA 1JFPA 1S51A 3MBVA 3X3CA 5B6VA 2F93A 5G36A 1UCQA 3UTVA 4OV0A 4MQTA 2JAGA 4KNFA 1EHKB 3NY8A 3SN6R 4MD2A 4XTLA 5H2OA 1M0MA 3QJUB 2YCWA 5JJEA 4BVNA 4BV0A 4FBZA 1DZEA 1GU8A 1C8SA 1M0LA 1MGYA 4N4WA 5G54A 4LDLA 3S3BB 2Z55A 5AZDA 3CODA 1KG9A 2VT4A 3C9MA 5TGZA 2ZFEA 3QDCA 1JV6A 3PQRA 3P0GA 4LDOA 2LNLA 1F50A 1BM1A 5B6ZA 4HWLA 3VW7A 3V2WA 2KS9A 3HARA 1AT9A 2Y02A 1TN5A 5DYSA 4A4MA 1PXRA 5A44A 2KSBA 3QBIA 4PXKA 4FPDA 1KMEA 5ITEA 1F88A 2RH1A 3HAQA 5H2MA 1KG8A 1JGJA 3UG9A 4X1HA 2YDVA 4NC3A 5H2PA 4N6HA 3VI0A 3UZAA 1C8RA 4BWBA 4J4QA 5KKHA 1FBKA 2JAFA 3KJ6A 3ZEVA 5H2KA 4JR8A 4K5YA 1X0SA 4GRVA 2G87A 2WJLA 3VG9A 5F8UA 5LWEA 2PEDA 4FAAB 4MQSA 5B34A 2R4SA 4FA7B 4MBSA 3OAXA 4WAVA 5G28A 3QJRB 1R2NA 1P8HA 3CAPA 5B35A 1XMEB 2KSAA 3REYA 2I21A 1CWQA 4BEYA 4GP8B 5A45A 2I1XA 3QAKA 3QJVB 4XTNA 3ZPRA 1H68A 4IB4A 3OE9A 5ITCA 5ETZA 5DHGA 2M3GA 1UAZA 4X31A 2ZZLA 1TN0A 1HZXA 1GZMA 2EI4A 3ZPQA 1Q5IA 5B6YA 1S53A 4GYCA 3EH3B 1BRDA 3QBKA 1E0PA 4G7QB 4TL3A 4EJ4A 4UHRA 3NS0A 1X0K1 3UONA 2QPEB 4HYJA 3EMLA 3HAPA 1X0I1 2Y04A 1C3WA 1IXFA 3NSBA 3NYAA 4GBRA 4AMJA 3COCA 3AYMA 3UTXA 1S8JA 4IARA 5AX1A 4DS7E 1P8UA 4PXFA 4AMIA 5H2IA 1BRXA 3WQJA 1XJIA 3OE0A 1L9HA 4HYXA 3HASA 5B2NA 5A8EA 2AT9A 5G2AA 3OE6A 1PXSA 4DKLA 3OE8A 2WJKA 3UTYA 2Z73A 3RFMA 4GP4B 5EN0A 5G2DA 5BR5A 3DDLA 5B6XA 4XTOA 3S8FB 5JJNA 5C1MA 2YCXA 3RZEA 3S3CB 3QJSB 1IW9A 3A7KA 5DHHA 1IW6A 1QKPA 2Y00A 4GP5B 4UG2A 4BUOA 4QIDA 3VHZA 1AP9A 3VGAA 3QBGA 1S8LA 2R4RA 5BR2A 4G7SB 1S54A 5H2LA 3QAPA 1O0AA 4G7RB 1GUEA 1XIOA 4KLYA 3X3BA 4X32A 3T45A 4G70B 5G53A 1U19A 3PXOA 1L0MA 3BVDB 1S52A 3ABWA 4EA3A 5H2HA 4JQ6A 3HAOA 3AYNA 4LDEA 4BEZA 2KSYA 3NY9A 3VVKA 2NTWA 4Y9HA 1LN6A 2L6XA 1BRRA 3QJQB 4QRYA 2BRDA 1QHJA 1PY6A 2Y01A 3HANA 3AM6A 4WW3A 5FJGA 4L35A 3QBLA 3S8GB 2J4YA 2YDOA 5AHYA 4DAJA 3S3DB 1R84A 1Q5JA 1E12A 2HPYA 5JJJA 3UZCA 3EH4B 1VGOA 5G2CA 4XT1A
chains in the Genus database with same CATH topology

2Y03A 4XT3A 3PBLA 3V2YA 4N4YB 5AWZA 1QKOA 5J7AA 5H2NA 2QPDB 1KGBA 1FBBA 1P8IA 2NTUA 3ODUA 4G71B 3PDSA 5H2JA 2I20A 2ZIYA 4XXJA 1F4ZA 2YCZA 4MD1A 3DQBA 4L6RA 3UTWA 3PWHA 4JKVA 4IAQA 1QM8A 3C9LA 3D4SA 4EIYA 1M0KA 4QI1A 4G72B 3EH5B 1VJMA 1H2SA 2I35A 4DJHA 5B0WA 2YCYA 5AX0A 1JV7A 2X72A 2F95A 3QJTB 4GPOA 5B6WA 5AHZA 1JFPA 1S51A 3MBVA 3X3CA 5B6VA 2F93A 5G36A 1UCQA 3UTVA 4OV0A 4MQTA 2JAGA 4KNFA 1EHKB 3NY8A 3SN6R 4MD2A 4XTLA 5H2OA 1M0MA 3QJUB 2YCWA 5JJEA 4BVNA 4BV0A 4FBZA 1DZEA 1GU8A 1C8SA 1M0LA 1MGYA 4N4WA 5G54A 4LDLA 3S3BB 2Z55A 5AZDA 3CODA 1KG9A 2VT4A 3C9MA 5TGZA 2ZFEA 3QDCA 1JV6A 3PQRA 3P0GA 4LDOA 2LNLA 1F50A 1BM1A 5B6ZA 4HWLA 3VW7A 3V2WA 2KS9A 3HARA 1AT9A 2Y02A 1TN5A 5DYSA 4A4MA 1PXRA 5A44A 2KSBA 3QBIA 4PXKA 4FPDA 1KMEA 5ITEA 1F88A 2RH1A 3HAQA 5H2MA 1KG8A 1JGJA 3UG9A 4X1HA 2YDVA 4NC3A 5H2PA 4N6HA 3VI0A 3UZAA 1C8RA 4BWBA 4J4QA 5KKHA 1FBKA 2JAFA 3KJ6A 3ZEVA 5H2KA 4JR8A 4K5YA 1X0SA 4GRVA 2G87A 2WJLA 3VG9A 5F8UA 5LWEA 2PEDA 4FAAB 4MQSA 5B34A 2R4SA 4FA7B 4MBSA 3OAXA 4WAVA 5G28A 3QJRB 1R2NA 1P8HA 3CAPA 5B35A 1XMEB 2KSAA 3REYA 2I21A 1CWQA 4BEYA 4GP8B 5A45A 2I1XA 3QAKA 3QJVB 4XTNA 3ZPRA 1H68A 4IB4A 3OE9A 5ITCA 5ETZA 5DHGA 2M3GA 1UAZA 4X31A 2ZZLA 1TN0A 1HZXA 1GZMA 2EI4A 3ZPQA 1Q5IA 5B6YA 1S53A 4GYCA 3EH3B 1BRDA 3QBKA 1E0PA 4G7QB 4TL3A 4EJ4A 4UHRA 3NS0A 1X0K1 3UONA 2QPEB 4HYJA 3EMLA 3HAPA 1X0I1 2Y04A 1C3WA 1IXFA 3NSBA 3NYAA 4GBRA 4AMJA 3COCA 3AYMA 3UTXA 1S8JA 4IARA 5AX1A 4DS7E 1P8UA 4PXFA 4AMIA 5H2IA 1BRXA 3WQJA 1XJIA 3OE0A 1L9HA 4HYXA 3HASA 5B2NA 5A8EA 2AT9A 5G2AA 3OE6A 1PXSA 4DKLA 3OE8A 2WJKA 3UTYA 2Z73A 3RFMA 4GP4B 5EN0A 5G2DA 5BR5A 3DDLA 5B6XA 4XTOA 3S8FB 5JJNA 5C1MA 2YCXA 3RZEA 3S3CB 3QJSB 1IW9A 3A7KA 5DHHA 1IW6A 1QKPA 2Y00A 4GP5B 4UG2A 4BUOA 4QIDA 3VHZA 1AP9A 3VGAA 3QBGA 1S8LA 2R4RA 5BR2A 4G7SB 1S54A 5H2LA 3QAPA 1O0AA 4G7RB 1GUEA 1XIOA 4KLYA 3X3BA 4X32A 3T45A 4G70B 5G53A 1U19A 3PXOA 1L0MA 3BVDB 1S52A 3ABWA 4EA3A 5H2HA 4JQ6A 3HAOA 3AYNA 4LDEA 4BEZA 2KSYA 3NY9A 3VVKA 2NTWA 4Y9HA 1LN6A 2L6XA 1BRRA 3QJQB 4QRYA 2BRDA 1QHJA 1PY6A 2Y01A 3HANA 3AM6A 4WW3A 5FJGA 4L35A 3QBLA 3S8GB 2J4YA 2YDOA 5AHYA 4DAJA 3S3DB 1R84A 1Q5JA 1E12A 2HPYA 5JJJA 3UZCA 3EH4B 1VGOA 5G2CA 4XT1A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2Y03 A;  4XT3 A;  3PBL A;  3V2Y A;  4N4Y B;  5AWZ A;  1QKO A;  5J7A A;  5H2N A;  2QPD B;  1KGB A;  1FBB A;  1P8I A;  2NTU A;  3ODU A;  4G71 B;  3PDS A;  5H2J A;  2I20 A;  2ZIY A;  4XXJ A;  1F4Z A;  2YCZ A;  4MD1 A;  3DQB A;  4L6R A;  3UTW A;  3PWH A;  4JKV A;  4IAQ A;  1QM8 A;  3C9L A;  3D4S A;  4EIY A;  1M0K A;  4QI1 A;  4G72 B;  3EH5 B;  1VJM A;  1H2S A;  2I35 A;  4DJH A;  5B0W A;  2YCY A;  5AX0 A;  1JV7 A;  2X72 A;  2F95 A;  3QJT B;  4GPO A;  5B6W A;  5AHZ A;  1JFP A;  1S51 A;  3MBV A;  3X3C A;  5B6V A;  2F93 A;  5G36 A;  1UCQ A;  3UTV A;  4OV0 A;  4MQT A;  2JAG A;  4KNF A;  1EHK B;  3NY8 A;  3SN6 R;  4MD2 A;  4XTL A;  5H2O A;  1M0M A;  3QJU B;  2YCW A;  5JJE A;  4BVN A;  4BV0 A;  4FBZ A;  1DZE A;  1GU8 A;  1C8S A;  1M0L A;  1MGY A;  4N4W A;  5G54 A;  4LDL A;  3S3B B;  2Z55 A;  5AZD A;  3COD A;  1KG9 A;  2VT4 A;  3C9M A;  5TGZ A;  2ZFE A;  3QDC A;  1JV6 A;  3PQR A;  3P0G A;  4LDO A;  2LNL A;  1F50 A;  1BM1 A;  5B6Z A;  4HWL A;  3VW7 A;  3V2W A;  2KS9 A;  3HAR A;  1AT9 A;  2Y02 A;  1TN5 A;  5DYS A;  4A4M A;  1PXR A;  5A44 A;  2KSB A;  3QBI A;  4PXK A;  4FPD A;  1KME A;  5ITE A;  1F88 A;  2RH1 A;  3HAQ A;  5H2M A;  1KG8 A;  1JGJ A;  3UG9 A;  4X1H A;  2YDV A;  4NC3 A;  5H2P A;  4N6H A;  3VI0 A;  3UZA A;  1C8R A;  4BWB A;  4J4Q A;  5KKH A;  1FBK A;  2JAF A;  3KJ6 A;  3ZEV A;  5H2K A;  4JR8 A;  4K5Y A;  1X0S A;  4GRV A;  2G87 A;  2WJL A;  3VG9 A;  5F8U A;  5LWE A;  2PED A;  4FAA B;  4MQS A;  5B34 A;  2R4S A;  4FA7 B;  4MBS A;  3OAX A;  4WAV A;  5G28 A;  3QJR B;  1R2N A;  1P8H A;  3CAP A;  5B35 A;  1XME B;  2KSA A;  3REY A;  2I21 A;  1CWQ A;  4BEY A;  4GP8 B;  5A45 A;  2I1X A;  3QAK A;  3QJV B;  4XTN A;  3ZPR A;  1H68 A;  4IB4 A;  3OE9 A;  5ITC A;  5ETZ A;  5DHG A;  2M3G A;  1UAZ A;  4X31 A;  2ZZL A;  1TN0 A;  1HZX A;  1GZM A;  2EI4 A;  3ZPQ A;  1Q5I A;  5B6Y A;  1S53 A;  4GYC A;  3EH3 B;  1BRD A;  3QBK A;  1E0P A;  4G7Q B;  4TL3 A;  4EJ4 A;  4UHR A;  3NS0 A;  1X0K 1;  3UON A;  2QPE B;  4HYJ A;  3EML A;  3HAP A;  1X0I 1;  2Y04 A;  1C3W A;  1IXF A;  3NSB A;  3NYA A;  4GBR A;  4AMJ A;  3COC A;  3AYM A;  3UTX A;  1S8J A;  4IAR A;  5AX1 A;  1P8U A;  4PXF A;  4AMI A;  5H2I A;  1BRX A;  3WQJ A;  1XJI A;  3OE0 A;  1L9H A;  4HYX A;  3HAS A;  5B2N A;  5A8E A;  2AT9 A;  5G2A A;  3OE6 A;  1PXS A;  4DKL A;  3OE8 A;  2WJK A;  3UTY A;  2Z73 A;  3RFM A;  4GP4 B;  5EN0 A;  5G2D A;  5BR5 A;  3DDL A;  5B6X A;  4XTO A;  3S8F B;  5JJN A;  5C1M A;  2YCX A;  3RZE A;  3S3C B;  3QJS B;  1IW9 A;  3A7K A;  5DHH A;  1IW6 A;  1QKP A;  2Y00 A;  4GP5 B;  4UG2 A;  4BUO A;  4QID A;  3VHZ A;  1AP9 A;  3VGA A;  3QBG A;  1S8L A;  2R4R A;  5BR2 A;  4G7S B;  1S54 A;  5H2L A;  3QAP A;  1O0A A;  4G7R B;  1GUE A;  1XIO A;  4KLY A;  3X3B A;  4X32 A;  3T45 A;  4G70 B;  5G53 A;  1U19 A;  3PXO A;  1L0M A;  3BVD B;  1S52 A;  3ABW A;  4EA3 A;  5H2H A;  4JQ6 A;  3HAO A;  3AYN A;  4LDE A;  4BEZ A;  2KSY A;  3NY9 A;  3VVK A;  2NTW A;  4Y9H A;  1LN6 A;  2L6X A;  1BRR A;  3QJQ B;  4QRY A;  2BRD A;  1QHJ A;  1PY6 A;  2Y01 A;  3HAN A;  3AM6 A;  4WW3 A;  5FJG A;  4L35 A;  3QBL A;  3S8G B;  2J4Y A;  2YDO A;  5AHY A;  4DAJ A;  3S3D B;  1R84 A;  1Q5J A;  1E12 A;  2HPY A;  5JJJ A;  3UZC A;  3EH4 B;  1VGO A;  5G2C A;  4XT1 A; 
#chains in the Genus database with same CATH topology
 2Y03 A;  4XT3 A;  3PBL A;  3V2Y A;  4N4Y B;  5AWZ A;  1QKO A;  5J7A A;  5H2N A;  2QPD B;  1KGB A;  1FBB A;  1P8I A;  2NTU A;  3ODU A;  4G71 B;  3PDS A;  5H2J A;  2I20 A;  2ZIY A;  4XXJ A;  1F4Z A;  2YCZ A;  4MD1 A;  3DQB A;  4L6R A;  3UTW A;  3PWH A;  4JKV A;  4IAQ A;  1QM8 A;  3C9L A;  3D4S A;  4EIY A;  1M0K A;  4QI1 A;  4G72 B;  3EH5 B;  1VJM A;  1H2S A;  2I35 A;  4DJH A;  5B0W A;  2YCY A;  5AX0 A;  1JV7 A;  2X72 A;  2F95 A;  3QJT B;  4GPO A;  5B6W A;  5AHZ A;  1JFP A;  1S51 A;  3MBV A;  3X3C A;  5B6V A;  2F93 A;  5G36 A;  1UCQ A;  3UTV A;  4OV0 A;  4MQT A;  2JAG A;  4KNF A;  1EHK B;  3NY8 A;  3SN6 R;  4MD2 A;  4XTL A;  5H2O A;  1M0M A;  3QJU B;  2YCW A;  5JJE A;  4BVN A;  4BV0 A;  4FBZ A;  1DZE A;  1GU8 A;  1C8S A;  1M0L A;  1MGY A;  4N4W A;  5G54 A;  4LDL A;  3S3B B;  2Z55 A;  5AZD A;  3COD A;  1KG9 A;  2VT4 A;  3C9M A;  5TGZ A;  2ZFE A;  3QDC A;  1JV6 A;  3PQR A;  3P0G A;  4LDO A;  2LNL A;  1F50 A;  1BM1 A;  5B6Z A;  4HWL A;  3VW7 A;  3V2W A;  2KS9 A;  3HAR A;  1AT9 A;  2Y02 A;  1TN5 A;  5DYS A;  4A4M A;  1PXR A;  5A44 A;  2KSB A;  3QBI A;  4PXK A;  4FPD A;  1KME A;  5ITE A;  1F88 A;  2RH1 A;  3HAQ A;  5H2M A;  1KG8 A;  1JGJ A;  3UG9 A;  4X1H A;  2YDV A;  4NC3 A;  5H2P A;  4N6H A;  3VI0 A;  3UZA A;  1C8R A;  4BWB A;  4J4Q A;  5KKH A;  1FBK A;  2JAF A;  3KJ6 A;  3ZEV A;  5H2K A;  4JR8 A;  4K5Y A;  1X0S A;  4GRV A;  2G87 A;  2WJL A;  3VG9 A;  5F8U A;  5LWE A;  2PED A;  4FAA B;  4MQS A;  5B34 A;  2R4S A;  4FA7 B;  4MBS A;  3OAX A;  4WAV A;  5G28 A;  3QJR B;  1R2N A;  1P8H A;  3CAP A;  5B35 A;  1XME B;  2KSA A;  3REY A;  2I21 A;  1CWQ A;  4BEY A;  4GP8 B;  5A45 A;  2I1X A;  3QAK A;  3QJV B;  4XTN A;  3ZPR A;  1H68 A;  4IB4 A;  3OE9 A;  5ITC A;  5ETZ A;  5DHG A;  2M3G A;  1UAZ A;  4X31 A;  2ZZL A;  1TN0 A;  1HZX A;  1GZM A;  2EI4 A;  3ZPQ A;  1Q5I A;  5B6Y A;  1S53 A;  4GYC A;  3EH3 B;  1BRD A;  3QBK A;  1E0P A;  4G7Q B;  4TL3 A;  4EJ4 A;  4UHR A;  3NS0 A;  1X0K 1;  3UON A;  2QPE B;  4HYJ A;  3EML A;  3HAP A;  1X0I 1;  2Y04 A;  1C3W A;  1IXF A;  3NSB A;  3NYA A;  4GBR A;  4AMJ A;  3COC A;  3AYM A;  3UTX A;  1S8J A;  4IAR A;  5AX1 A;  4DS7 E;  1P8U A;  4PXF A;  4AMI A;  5H2I A;  1BRX A;  3WQJ A;  1XJI A;  3OE0 A;  1L9H A;  4HYX A;  3HAS A;  5B2N A;  5A8E A;  2AT9 A;  5G2A A;  3OE6 A;  1PXS A;  4DKL A;  3OE8 A;  2WJK A;  3UTY A;  2Z73 A;  3RFM A;  4GP4 B;  5EN0 A;  5G2D A;  5BR5 A;  3DDL A;  5B6X A;  4XTO A;  3S8F B;  5JJN A;  5C1M A;  2YCX A;  3RZE A;  3S3C B;  3QJS B;  1IW9 A;  3A7K A;  5DHH A;  1IW6 A;  1QKP A;  2Y00 A;  4GP5 B;  4UG2 A;  4BUO A;  4QID A;  3VHZ A;  1AP9 A;  3VGA A;  3QBG A;  1S8L A;  2R4R A;  5BR2 A;  4G7S B;  1S54 A;  5H2L A;  3QAP A;  1O0A A;  4G7R B;  1GUE A;  1XIO A;  4KLY A;  3X3B A;  4X32 A;  3T45 A;  4G70 B;  5G53 A;  1U19 A;  3PXO A;  1L0M A;  3BVD B;  1S52 A;  3ABW A;  4EA3 A;  5H2H A;  4JQ6 A;  3HAO A;  3AYN A;  4LDE A;  4BEZ A;  2KSY A;  3NY9 A;  3VVK A;  2NTW A;  4Y9H A;  1LN6 A;  2L6X A;  1BRR A;  3QJQ B;  4QRY A;  2BRD A;  1QHJ A;  1PY6 A;  2Y01 A;  3HAN A;  3AM6 A;  4WW3 A;  5FJG A;  4L35 A;  3QBL A;  3S8G B;  2J4Y A;  2YDO A;  5AHY A;  4DAJ A;  3S3D B;  1R84 A;  1Q5J A;  1E12 A;  2HPY A;  5JJJ A;  3UZC A;  3EH4 B;  1VGO A;  5G2C A;  4XT1 A; 
#chains in the Genus database with same CATH homology
 2Y03 A;  4XT3 A;  3PBL A;  3V2Y A;  4N4Y B;  5AWZ A;  1QKO A;  5J7A A;  5H2N A;  2QPD B;  1KGB A;  1FBB A;  1P8I A;  2NTU A;  3ODU A;  4G71 B;  3PDS A;  5H2J A;  2I20 A;  2ZIY A;  4XXJ A;  1F4Z A;  2YCZ A;  4MD1 A;  3DQB A;  4L6R A;  3UTW A;  3PWH A;  4JKV A;  4IAQ A;  1QM8 A;  3C9L A;  3D4S A;  4EIY A;  1M0K A;  4QI1 A;  4G72 B;  3EH5 B;  1VJM A;  1H2S A;  2I35 A;  4DJH A;  5B0W A;  2YCY A;  5AX0 A;  1JV7 A;  2X72 A;  2F95 A;  3QJT B;  4GPO A;  5B6W A;  5AHZ A;  1JFP A;  1S51 A;  3MBV A;  3X3C A;  5B6V A;  2F93 A;  5G36 A;  1UCQ A;  3UTV A;  4OV0 A;  4MQT A;  2JAG A;  4KNF A;  1EHK B;  3NY8 A;  3SN6 R;  4MD2 A;  4XTL A;  5H2O A;  1M0M A;  3QJU B;  2YCW A;  5JJE A;  4BVN A;  4BV0 A;  4FBZ A;  1DZE A;  1GU8 A;  1C8S A;  1M0L A;  1MGY A;  4N4W A;  5G54 A;  4LDL A;  3S3B B;  2Z55 A;  5AZD A;  3COD A;  1KG9 A;  2VT4 A;  3C9M A;  5TGZ A;  2ZFE A;  3QDC A;  1JV6 A;  3PQR A;  3P0G A;  4LDO A;  2LNL A;  1F50 A;  1BM1 A;  5B6Z A;  4HWL A;  3VW7 A;  3V2W A;  2KS9 A;  3HAR A;  1AT9 A;  2Y02 A;  1TN5 A;  5DYS A;  4A4M A;  1PXR A;  5A44 A;  2KSB A;  3QBI A;  4PXK A;  4FPD A;  1KME A;  5ITE A;  1F88 A;  2RH1 A;  3HAQ A;  5H2M A;  1KG8 A;  1JGJ A;  3UG9 A;  4X1H A;  2YDV A;  4NC3 A;  5H2P A;  4N6H A;  3VI0 A;  3UZA A;  1C8R A;  4BWB A;  4J4Q A;  5KKH A;  1FBK A;  2JAF A;  3KJ6 A;  3ZEV A;  5H2K A;  4JR8 A;  4K5Y A;  1X0S A;  4GRV A;  2G87 A;  2WJL A;  3VG9 A;  5F8U A;  5LWE A;  2PED A;  4FAA B;  4MQS A;  5B34 A;  2R4S A;  4FA7 B;  4MBS A;  3OAX A;  4WAV A;  5G28 A;  3QJR B;  1R2N A;  1P8H A;  3CAP A;  5B35 A;  1XME B;  2KSA A;  3REY A;  2I21 A;  1CWQ A;  4BEY A;  4GP8 B;  5A45 A;  2I1X A;  3QAK A;  3QJV B;  4XTN A;  3ZPR A;  1H68 A;  4IB4 A;  3OE9 A;  5ITC A;  5ETZ A;  5DHG A;  2M3G A;  1UAZ A;  4X31 A;  2ZZL A;  1TN0 A;  1HZX A;  1GZM A;  2EI4 A;  3ZPQ A;  1Q5I A;  5B6Y A;  1S53 A;  4GYC A;  3EH3 B;  1BRD A;  3QBK A;  1E0P A;  4G7Q B;  4TL3 A;  4EJ4 A;  4UHR A;  3NS0 A;  1X0K 1;  3UON A;  2QPE B;  4HYJ A;  3EML A;  3HAP A;  1X0I 1;  2Y04 A;  1C3W A;  1IXF A;  3NSB A;  3NYA A;  4GBR A;  4AMJ A;  3COC A;  3AYM A;  3UTX A;  1S8J A;  4IAR A;  5AX1 A;  4DS7 E;  1P8U A;  4PXF A;  4AMI A;  5H2I A;  1BRX A;  3WQJ A;  1XJI A;  3OE0 A;  1L9H A;  4HYX A;  3HAS A;  5B2N A;  5A8E A;  2AT9 A;  5G2A A;  3OE6 A;  1PXS A;  4DKL A;  3OE8 A;  2WJK A;  3UTY A;  2Z73 A;  3RFM A;  4GP4 B;  5EN0 A;  5G2D A;  5BR5 A;  3DDL A;  5B6X A;  4XTO A;  3S8F B;  5JJN A;  5C1M A;  2YCX A;  3RZE A;  3S3C B;  3QJS B;  1IW9 A;  3A7K A;  5DHH A;  1IW6 A;  1QKP A;  2Y00 A;  4GP5 B;  4UG2 A;  4BUO A;  4QID A;  3VHZ A;  1AP9 A;  3VGA A;  3QBG A;  1S8L A;  2R4R A;  5BR2 A;  4G7S B;  1S54 A;  5H2L A;  3QAP A;  1O0A A;  4G7R B;  1GUE A;  1XIO A;  4KLY A;  3X3B A;  4X32 A;  3T45 A;  4G70 B;  5G53 A;  1U19 A;  3PXO A;  1L0M A;  3BVD B;  1S52 A;  3ABW A;  4EA3 A;  5H2H A;  4JQ6 A;  3HAO A;  3AYN A;  4LDE A;  4BEZ A;  2KSY A;  3NY9 A;  3VVK A;  2NTW A;  4Y9H A;  1LN6 A;  2L6X A;  1BRR A;  3QJQ B;  4QRY A;  2BRD A;  1QHJ A;  1PY6 A;  2Y01 A;  3HAN A;  3AM6 A;  4WW3 A;  5FJG A;  4L35 A;  3QBL A;  3S8G B;  2J4Y A;  2YDO A;  5AHY A;  4DAJ A;  3S3D B;  1R84 A;  1Q5J A;  1E12 A;  2HPY A;  5JJJ A;  3UZC A;  3EH4 B;  1VGO A;  5G2C A;  4XT1 A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

1BRDA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations