2N1DB

Solution structure of the mrg15-mrgbp complex
Total Genus 54

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
172
structure length
172
Chain Sequence
SNAEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKAV

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (164-177)EMPTYTI1 (161-164)O1 (153-155)Updating...
connected with : NaN
molecule tags Protein binding
source organism Homo sapiens
publication title Structural Basis for Multi-specificity of MRG Domains.
pubmed doi rcsb
molecule keywords MRG/MORF4L-binding protein
total genus 54
structure length 172
sequence length 172
ec nomenclature
pdb deposition date 2015-03-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2n1dB00
2AQLA 2LKMB 2Y0NA 2N1DB 2F5JA
chains in the Genus database with same CATH superfamily
1TWHA 1TWAA 3GTLA 2AQLA 3GTGA 2CW0D 2E2IA 2HWGA 2JA5A 1SFOA 2LPIA 1EZBA 4CEHA 2N1DB 2EZBA 2N3EA 4C5RA 1W27A 2F5JA 2VUMA 1YNJD 1T6PA 1YNND 1Y1WA 2Y0NA 1EZAA 2A69D 3GTKA 1ZYRD 2X0PA 3FKIA 3NZ4A 2BE5D 2O5JD 1I6VD 2YIIA 4C5UA 3GTPA 1TWCA 2K3OA 1TWGA 4V2QA 2X0QA 3H0GA 2EZAA 1Y1VA 5IZ2A 2A6ED 2FIOA 2JA7A 1Y2MA 1ZYMA 1TWFA 2E2HA 2A6HD 3LR8A 2MX9A 3U44A 2B63A 2LPJA 2NVYA 3EZEA 1WCMA 2JA6A 4CEIA 2K3QA 3GTQA 2R93A 2MQAA 4C2MA 3LR6A 2X0OA 3LRDA 4V2RA 3LR2A 2YU9A 4CEJA 2A68D 1T6JA 3GTOA 4FBSA 3GTMA 2VK9A 3EZAA 3GTJA 1I3QA 4QIWA 4CQ5A 3EZBA 1R9TA 1SMYD 3CQZA 2MX8A 1K83A 2EZCA 2HROA 2LKMB 2LYIA 1I50A 1IW7D 2NVXA 2R92A 2MP0A 4C6GA 4BABA 1HQMD 4C5SA 2LTHA 4BAAA 2FIPA 2R7ZA 3U4QA 2K3NA
chains in the Genus database with same CATH topology
1TWHA 1TWAA 3GTLA 2AQLA 3GTGA 2CW0D 2E2IA 2JA5A 1SFOA 2LPIA 4CEHA 2N1DB 2N3EA 2F5JA 2VUMA 1YNJD 1YNND 1Y1WA 2Y0NA 2A69D 3GTKA 1ZYRD 2X0PA 3FKIA 2BE5D 2O5JD 1I6VD 3GTPA 1TWCA 2K3OA 1TWGA 2X0QA 3H0GA 1Y1VA 5IZ2A 2A6ED 2FIOA 2JA7A 1TWFA 2E2HA 2A6HD 3LR8A 2MX9A 3U44A 2B63A 2LPJA 2NVYA 1WCMA 2JA6A 4CEIA 2K3QA 3GTQA 2R93A 2MQAA 4C2MA 3LR6A 2X0OA 3LRDA 3LR2A 2YU9A 4CEJA 2A68D 3GTOA 4FBSA 3GTMA 2VK9A 3GTJA 1I3QA 4QIWA 1R9TA 1SMYD 3CQZA 2MX8A 1K83A 2LKMB 2LYIA 1I50A 1IW7D 2NVXA 2R92A 1HQMD 2LTHA 2FIPA 2R7ZA 3U4QA 2K3NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AQL A;  2LKM B;  2Y0N A;  2N1D B;  2F5J A; 
#chains in the Genus database with same CATH topology
 1TWH A;  1TWA A;  3GTL A;  2AQL A;  3GTG A;  2CW0 D;  2E2I A;  2HWG A;  2JA5 A;  1SFO A;  2LPI A;  1EZB A;  4CEH A;  2N1D B;  2EZB A;  2N3E A;  4C5R A;  1W27 A;  2F5J A;  2VUM A;  1YNJ D;  1T6P A;  1YNN D;  1Y1W A;  2Y0N A;  1EZA A;  2A69 D;  3GTK A;  1ZYR D;  2X0P A;  3FKI A;  3NZ4 A;  2BE5 D;  2O5J D;  1I6V D;  2YII A;  4C5U A;  3GTP A;  1TWC A;  2K3O A;  1TWG A;  4V2Q A;  2X0Q A;  3H0G A;  2EZA A;  1Y1V A;  5IZ2 A;  2A6E D;  2FIO A;  2JA7 A;  1Y2M A;  1ZYM A;  1TWF A;  2E2H A;  2A6H D;  3LR8 A;  2MX9 A;  3U44 A;  2B63 A;  2LPJ A;  2NVY A;  3EZE A;  1WCM A;  2JA6 A;  4CEI A;  2K3Q A;  3GTQ A;  2R93 A;  2MQA A;  4C2M A;  3LR6 A;  2X0O A;  3LRD A;  4V2R A;  3LR2 A;  2YU9 A;  4CEJ A;  2A68 D;  1T6J A;  3GTO A;  4FBS A;  3GTM A;  2VK9 A;  3EZA A;  3GTJ A;  1I3Q A;  4QIW A;  4CQ5 A;  3EZB A;  1R9T A;  1SMY D;  3CQZ A;  2MX8 A;  1K83 A;  2EZC A;  2HRO A;  2LKM B;  2LYI A;  1I50 A;  1IW7 D;  2NVX A;  2R92 A;  2MP0 A;  4C6G A;  4BAB A;  1HQM D;  4C5S A;  2LTH A;  4BAA A;  2FIP A;  2R7Z A;  3U4Q A;  2K3N A; 
#chains in the Genus database with same CATH homology
 1TWH A;  1TWA A;  3GTL A;  2AQL A;  3GTG A;  2CW0 D;  2E2I A;  2JA5 A;  1SFO A;  2LPI A;  4CEH A;  2N1D B;  2N3E A;  2F5J A;  2VUM A;  1YNJ D;  1YNN D;  1Y1W A;  2Y0N A;  2A69 D;  3GTK A;  1ZYR D;  2X0P A;  3FKI A;  2BE5 D;  2O5J D;  1I6V D;  3GTP A;  1TWC A;  2K3O A;  1TWG A;  2X0Q A;  3H0G A;  1Y1V A;  5IZ2 A;  2A6E D;  2FIO A;  2JA7 A;  1TWF A;  2E2H A;  2A6H D;  3LR8 A;  2MX9 A;  3U44 A;  2B63 A;  2LPJ A;  2NVY A;  1WCM A;  2JA6 A;  4CEI A;  2K3Q A;  3GTQ A;  2R93 A;  2MQA A;  4C2M A;  3LR6 A;  2X0O A;  3LRD A;  3LR2 A;  2YU9 A;  4CEJ A;  2A68 D;  3GTO A;  4FBS A;  3GTM A;  2VK9 A;  3GTJ A;  1I3Q A;  4QIW A;  1R9T A;  1SMY D;  3CQZ A;  2MX8 A;  1K83 A;  2LKM B;  2LYI A;  1I50 A;  1IW7 D;  2NVX A;  2R92 A;  1HQM D;  2LTH A;  2FIP A;  2R7Z A;  3U4Q A;  2K3N A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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