2Y0NA

Crystal structure of the complex between dosage compensation factors msl1 and msl3
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
194
structure length
165
Chain Sequence
TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSAAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transcription
molecule keywords MALE-SPECIFIC LETHAL 3 HOMOLOG
total genus 49
structure length 165
sequence length 194
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2010-12-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2y0nA00
2AQLA 2Y0NA 2F5JA 2LKMB 2N1DB
chains in the Genus database with same CATH superfamily
1EZBA 1HQMD 2YU9A 2HWGA 2E2IA 4C5SA 2EZAA 2HROA 1R9TA 1SMYD 2JA6A 2CW0D 4C5RA 1Y1WA 1ZYMA 2MQAA 1SFOA 3U4QA 4BABA 4C6GA 4V2RA 2K3OA 2K3NA 2VUMA 1TWFA 3H0GA 2A68D 2LPJA 2Y0NA 2YIIA 1T6JA 3EZEA 3GTQA 2LKMB 4CEJA 4CEHA 2A69D 4FBSA 4BAAA 2FIOA 2MX8A 2X0PA 1TWCA 3EZBA 2LPIA 1TWAA 3NZ4A 2N3EA 3EZAA 1Y2MA 2O5JD 2BE5D 1TWGA 2A6ED 1Y1VA 2MP0A 3GTOA 3LRDA 1YNJD 3GTLA 2JA5A 1YNND 2X0QA 1I50A 2R92A 1TWHA 1I3QA 2EZCA 3FKIA 2EZBA 4C5UA 2LTHA 2N1DB 3CQZA 4V2QA 2B63A 2R93A 2A6HD 3GTGA 2LYIA 4CEIA 3LR6A 3LR8A 4C2MA 1I6VD 3LR2A 1EZAA 2JA7A 2MX9A 1IW7D 1WCMA 2NVYA 2E2HA 4QIWA 2X0OA 2K3QA 4CQ5A 1K83A 3GTPA 2R7ZA 2VK9A 2AQLA 5IZ2A 3GTMA 2F5JA 1W27A 3U44A 1T6PA 3GTJA 2FIPA 1ZYRD 2NVXA 3GTKA
chains in the Genus database with same CATH topology
1HQMD 2YU9A 2E2IA 1R9TA 1SMYD 2JA6A 2CW0D 1Y1WA 2MQAA 1SFOA 3U4QA 2K3OA 2K3NA 2VUMA 1TWFA 3H0GA 2A68D 2LPJA 2Y0NA 3GTQA 2LKMB 4CEJA 4CEHA 2A69D 4FBSA 2FIOA 2MX8A 2X0PA 1TWCA 2LPIA 1TWAA 2N3EA 2O5JD 2BE5D 1TWGA 2A6ED 1Y1VA 3GTOA 3LRDA 1YNJD 3GTLA 2JA5A 1YNND 2X0QA 1I50A 2R92A 1TWHA 1I3QA 3FKIA 2LTHA 2N1DB 3CQZA 2B63A 2R93A 2A6HD 3GTGA 2LYIA 4CEIA 3LR6A 3LR8A 4C2MA 1I6VD 3LR2A 2JA7A 2MX9A 1IW7D 1WCMA 2NVYA 2E2HA 4QIWA 2X0OA 2K3QA 1K83A 3GTPA 2R7ZA 2VK9A 2AQLA 5IZ2A 3GTMA 2F5JA 3U44A 3GTJA 2FIPA 1ZYRD 2NVXA 3GTKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AQL A;  2Y0N A;  2F5J A;  2LKM B;  2N1D B; 
#chains in the Genus database with same CATH topology
 1EZB A;  1HQM D;  2YU9 A;  2HWG A;  2E2I A;  4C5S A;  2EZA A;  2HRO A;  1R9T A;  1SMY D;  2JA6 A;  2CW0 D;  4C5R A;  1Y1W A;  1ZYM A;  2MQA A;  1SFO A;  3U4Q A;  4BAB A;  4C6G A;  4V2R A;  2K3O A;  2K3N A;  2VUM A;  1TWF A;  3H0G A;  2A68 D;  2LPJ A;  2Y0N A;  2YII A;  1T6J A;  3EZE A;  3GTQ A;  2LKM B;  4CEJ A;  4CEH A;  2A69 D;  4FBS A;  4BAA A;  2FIO A;  2MX8 A;  2X0P A;  1TWC A;  3EZB A;  2LPI A;  1TWA A;  3NZ4 A;  2N3E A;  3EZA A;  1Y2M A;  2O5J D;  2BE5 D;  1TWG A;  2A6E D;  1Y1V A;  2MP0 A;  3GTO A;  3LRD A;  1YNJ D;  3GTL A;  2JA5 A;  1YNN D;  2X0Q A;  1I50 A;  2R92 A;  1TWH A;  1I3Q A;  2EZC A;  3FKI A;  2EZB A;  4C5U A;  2LTH A;  2N1D B;  3CQZ A;  4V2Q A;  2B63 A;  2R93 A;  2A6H D;  3GTG A;  2LYI A;  4CEI A;  3LR6 A;  3LR8 A;  4C2M A;  1I6V D;  3LR2 A;  1EZA A;  2JA7 A;  2MX9 A;  1IW7 D;  1WCM A;  2NVY A;  2E2H A;  4QIW A;  2X0O A;  2K3Q A;  4CQ5 A;  1K83 A;  3GTP A;  2R7Z A;  2VK9 A;  2AQL A;  5IZ2 A;  3GTM A;  2F5J A;  1W27 A;  3U44 A;  1T6P A;  3GTJ A;  2FIP A;  1ZYR D;  2NVX A;  3GTK A; 
#chains in the Genus database with same CATH homology
 1HQM D;  2YU9 A;  2E2I A;  1R9T A;  1SMY D;  2JA6 A;  2CW0 D;  1Y1W A;  2MQA A;  1SFO A;  3U4Q A;  2K3O A;  2K3N A;  2VUM A;  1TWF A;  3H0G A;  2A68 D;  2LPJ A;  2Y0N A;  3GTQ A;  2LKM B;  4CEJ A;  4CEH A;  2A69 D;  4FBS A;  2FIO A;  2MX8 A;  2X0P A;  1TWC A;  2LPI A;  1TWA A;  2N3E A;  2O5J D;  2BE5 D;  1TWG A;  2A6E D;  1Y1V A;  3GTO A;  3LRD A;  1YNJ D;  3GTL A;  2JA5 A;  1YNN D;  2X0Q A;  1I50 A;  2R92 A;  1TWH A;  1I3Q A;  3FKI A;  2LTH A;  2N1D B;  3CQZ A;  2B63 A;  2R93 A;  2A6H D;  3GTG A;  2LYI A;  4CEI A;  3LR6 A;  3LR8 A;  4C2M A;  1I6V D;  3LR2 A;  2JA7 A;  2MX9 A;  1IW7 D;  1WCM A;  2NVY A;  2E2H A;  4QIW A;  2X0O A;  2K3Q A;  1K83 A;  3GTP A;  2R7Z A;  2VK9 A;  2AQL A;  5IZ2 A;  3GTM A;  2F5J A;  3U44 A;  3GTJ A;  2FIP A;  1ZYR D;  2NVX A;  3GTK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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