2Y0NA

Crystal structure of the complex between dosage compensation factors msl1 and msl3
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
194
structure length
165
Chain Sequence
TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSAAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords MALE-SPECIFIC LETHAL 3 HOMOLOG
publication title Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transcription
total genus 49
structure length 165
sequence length 194
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2010-12-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2y0nA00
2F5JA 2AQLA 2N1DB 2LKMB 2Y0NA
chains in the Genus database with same CATH superfamily
1IW7D 2A68D 3GTMA 1TWAA 4CEHA 1TWFA 1T6JA 2E2IA 2X0QA 2VUMA 2N3EA 3LR6A 2K3OA 4C5UA 2EZBA 1ZYMA 2JA7A 3GTGA 2AQLA 2X0OA 2N1DB 3LR2A 1TWGA 2LYIA 2R7ZA 3NZ4A 4C2MA 4FBSA 2R93A 2EZCA 1I50A 1ZYRD 3FKIA 2A6ED 2MQAA 2E2HA 2LPIA 1YNJD 2Y0NA 2JA5A 1HQMD 3LRDA 2HWGA 1SFOA 1Y1VA 3LR8A 2R92A 2YIIA 3EZEA 3GTPA 3GTOA 2LPJA 2JA6A 1WCMA 2MP0A 4QIWA 2VK9A 1Y2MA 1Y1WA 1K83A 2O5JD 1T6PA 2NVXA 3H0GA 1EZAA 2A69D 3U44A 2A6HD 2K3NA 2B63A 3U4QA 4V2QA 4C5SA 4CEIA 3GTLA 2FIOA 2MX9A 2K3QA 2LKMB 2X0PA 2HROA 2MX8A 2LTHA 2NVYA 2YU9A 4C5RA 4BAAA 2FIPA 1I3QA 3GTJA 2CW0D 4V2RA 3EZBA 1R9TA 3GTQA 1W27A 1EZBA 4BABA 1TWCA 4C6GA 1SMYD 3EZAA 2EZAA 2F5JA 3GTKA 5IZ2A 2BE5D 3CQZA 1TWHA 1I6VD 4CQ5A 4CEJA 1YNND
chains in the Genus database with same CATH topology
1IW7D 2A68D 3GTMA 1TWAA 4CEHA 1TWFA 2E2IA 2X0QA 2VUMA 2N3EA 3LR6A 2K3OA 2JA7A 3GTGA 2AQLA 2X0OA 2N1DB 3LR2A 1TWGA 2LYIA 2R7ZA 4C2MA 2R93A 4FBSA 1I50A 1ZYRD 3FKIA 2A6ED 2MQAA 2E2HA 2LPIA 1YNJD 2Y0NA 2JA5A 1HQMD 3LRDA 1SFOA 1Y1VA 3LR8A 2R92A 3GTPA 3GTOA 2LPJA 2JA6A 1WCMA 4QIWA 2VK9A 1Y1WA 1K83A 2O5JD 2NVXA 3H0GA 2A69D 3U44A 2A6HD 2K3NA 2B63A 3U4QA 4CEIA 3GTLA 2FIOA 2MX9A 2K3QA 2LKMB 2X0PA 2MX8A 2LTHA 2NVYA 2YU9A 2FIPA 1I3QA 3GTJA 2CW0D 1R9TA 3GTQA 1TWCA 1SMYD 2F5JA 3GTKA 5IZ2A 2BE5D 3CQZA 1TWHA 1I6VD 4CEJA 1YNND
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F5J A;  2AQL A;  2N1D B;  2LKM B;  2Y0N A; 
#chains in the Genus database with same CATH topology
 1IW7 D;  2A68 D;  3GTM A;  1TWA A;  4CEH A;  1TWF A;  1T6J A;  2E2I A;  2X0Q A;  2VUM A;  2N3E A;  3LR6 A;  2K3O A;  4C5U A;  2EZB A;  1ZYM A;  2JA7 A;  3GTG A;  2AQL A;  2X0O A;  2N1D B;  3LR2 A;  1TWG A;  2LYI A;  2R7Z A;  3NZ4 A;  4C2M A;  4FBS A;  2R93 A;  2EZC A;  1I50 A;  1ZYR D;  3FKI A;  2A6E D;  2MQA A;  2E2H A;  2LPI A;  1YNJ D;  2Y0N A;  2JA5 A;  1HQM D;  3LRD A;  2HWG A;  1SFO A;  1Y1V A;  3LR8 A;  2R92 A;  2YII A;  3EZE A;  3GTP A;  3GTO A;  2LPJ A;  2JA6 A;  1WCM A;  2MP0 A;  4QIW A;  2VK9 A;  1Y2M A;  1Y1W A;  1K83 A;  2O5J D;  1T6P A;  2NVX A;  3H0G A;  1EZA A;  2A69 D;  3U44 A;  2A6H D;  2K3N A;  2B63 A;  3U4Q A;  4V2Q A;  4C5S A;  4CEI A;  3GTL A;  2FIO A;  2MX9 A;  2K3Q A;  2LKM B;  2X0P A;  2HRO A;  2MX8 A;  2LTH A;  2NVY A;  2YU9 A;  4C5R A;  4BAA A;  2FIP A;  1I3Q A;  3GTJ A;  2CW0 D;  4V2R A;  3EZB A;  1R9T A;  3GTQ A;  1W27 A;  1EZB A;  4BAB A;  1TWC A;  4C6G A;  1SMY D;  3EZA A;  2EZA A;  2F5J A;  3GTK A;  5IZ2 A;  2BE5 D;  3CQZ A;  1TWH A;  1I6V D;  4CQ5 A;  4CEJ A;  1YNN D; 
#chains in the Genus database with same CATH homology
 1IW7 D;  2A68 D;  3GTM A;  1TWA A;  4CEH A;  1TWF A;  2E2I A;  2X0Q A;  2VUM A;  2N3E A;  3LR6 A;  2K3O A;  2JA7 A;  3GTG A;  2AQL A;  2X0O A;  2N1D B;  3LR2 A;  1TWG A;  2LYI A;  2R7Z A;  4C2M A;  2R93 A;  4FBS A;  1I50 A;  1ZYR D;  3FKI A;  2A6E D;  2MQA A;  2E2H A;  2LPI A;  1YNJ D;  2Y0N A;  2JA5 A;  1HQM D;  3LRD A;  1SFO A;  1Y1V A;  3LR8 A;  2R92 A;  3GTP A;  3GTO A;  2LPJ A;  2JA6 A;  1WCM A;  4QIW A;  2VK9 A;  1Y1W A;  1K83 A;  2O5J D;  2NVX A;  3H0G A;  2A69 D;  3U44 A;  2A6H D;  2K3N A;  2B63 A;  3U4Q A;  4CEI A;  3GTL A;  2FIO A;  2MX9 A;  2K3Q A;  2LKM B;  2X0P A;  2MX8 A;  2LTH A;  2NVY A;  2YU9 A;  2FIP A;  1I3Q A;  3GTJ A;  2CW0 D;  1R9T A;  3GTQ A;  1TWC A;  1SMY D;  2F5J A;  3GTK A;  5IZ2 A;  2BE5 D;  3CQZ A;  1TWH A;  1I6V D;  4CEJ A;  1YNN D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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