2Y0NA

Crystal structure of the complex between dosage compensation factors msl1 and msl3
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
194
structure length
165
Chain Sequence
b'TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSAAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords MALE-SPECIFIC LETHAL 3 HOMOLOG
molecule tags Transcription
source organism Homo sapiens
publication title Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
pubmed doi rcsb
total genus 49
structure length 165
sequence length 194
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2010-12-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2y0nA00
2N1DB 2AQLA 2LKMB 2Y0NA 2F5JA
chains in the Genus database with same CATH superfamily
3EZAA 2E2IA 3GTKA 1EZBA 2MP0A 1Y1WA 2N3EA 2X0PA 3GTPA 2Y0NA 1EZAA 4CEIA 2BE5D 1W27A 4C5UA 4CQ5A 2LPJA 3EZEA 2A69D 2VUMA 1IW7D 3CQZA 2FIOA 2K3OA 2LPIA 2MX9A 1TWCA 2NVXA 3LR6A 3LR2A 3GTMA 4C5SA 2K3NA 3GTOA 3U44A 2E2HA 2LKMB 1SMYD 1TWGA 2EZAA 3U4QA 1ZYMA 2NVYA 2F5JA 3GTGA 2CW0D 4CEHA 2JA7A 2LTHA 2AQLA 2MX8A 3GTJA 1Y2MA 2YU9A 3LRDA 3GTLA 1WCMA 2R92A 2K3QA 2MQAA 2JA5A 2HROA 4CEJA 2A68D 1I6VD 1YNND 1T6PA 2HWGA 1I50A 2X0QA 2A6HD 2EZBA 4BAAA 1HQMD 4V2QA 2X0OA 3NZ4A 4QIWA 4BABA 4V2RA 3GTQA 2JA6A 1TWFA 3H0GA 1ZYRD 1T6JA 1R9TA 4FBSA 2B63A 1K83A 3LR8A 4C2MA 2O5JD 1TWAA 2N1DB 2VK9A 1TWHA 2R7ZA 3FKIA 2A6ED 3EZBA 5IZ2A 1SFOA 2LYIA 2FIPA 4C6GA 1I3QA 1Y1VA 2EZCA 4C5RA 2YIIA 1YNJD 2R93A
chains in the Genus database with same CATH topology
2E2IA 3GTKA 1Y1WA 2N3EA 2X0PA 3GTPA 2Y0NA 4CEIA 2BE5D 2LPJA 2A69D 2VUMA 1IW7D 3CQZA 2FIOA 2K3OA 2LPIA 2MX9A 1TWCA 2NVXA 3LR6A 3LR2A 3GTMA 2K3NA 3GTOA 3U44A 2E2HA 2LKMB 1SMYD 1TWGA 3U4QA 2NVYA 2F5JA 3GTGA 2CW0D 4CEHA 2JA7A 2LTHA 2AQLA 2MX8A 3GTJA 2YU9A 3LRDA 3GTLA 1WCMA 2R92A 2K3QA 2MQAA 2JA5A 4CEJA 2A68D 1I6VD 1YNND 1I50A 2X0QA 2A6HD 1HQMD 2X0OA 4QIWA 3GTQA 2JA6A 1TWFA 3H0GA 1ZYRD 1R9TA 4FBSA 2B63A 1K83A 3LR8A 4C2MA 2O5JD 1TWAA 2N1DB 2VK9A 1TWHA 2R7ZA 3FKIA 2A6ED 5IZ2A 1SFOA 2LYIA 2FIPA 1I3QA 1Y1VA 1YNJD 2R93A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N1D B;  2AQL A;  2LKM B;  2Y0N A;  2F5J A; 
#chains in the Genus database with same CATH topology
 3EZA A;  2E2I A;  3GTK A;  1EZB A;  2MP0 A;  1Y1W A;  2N3E A;  2X0P A;  3GTP A;  2Y0N A;  1EZA A;  4CEI A;  2BE5 D;  1W27 A;  4C5U A;  4CQ5 A;  2LPJ A;  3EZE A;  2A69 D;  2VUM A;  1IW7 D;  3CQZ A;  2FIO A;  2K3O A;  2LPI A;  2MX9 A;  1TWC A;  2NVX A;  3LR6 A;  3LR2 A;  3GTM A;  4C5S A;  2K3N A;  3GTO A;  3U44 A;  2E2H A;  2LKM B;  1SMY D;  1TWG A;  2EZA A;  3U4Q A;  1ZYM A;  2NVY A;  2F5J A;  3GTG A;  2CW0 D;  4CEH A;  2JA7 A;  2LTH A;  2AQL A;  2MX8 A;  3GTJ A;  1Y2M A;  2YU9 A;  3LRD A;  3GTL A;  1WCM A;  2R92 A;  2K3Q A;  2MQA A;  2JA5 A;  2HRO A;  4CEJ A;  2A68 D;  1I6V D;  1YNN D;  1T6P A;  2HWG A;  1I50 A;  2X0Q A;  2A6H D;  2EZB A;  4BAA A;  1HQM D;  4V2Q A;  2X0O A;  3NZ4 A;  4QIW A;  4BAB A;  4V2R A;  3GTQ A;  2JA6 A;  1TWF A;  3H0G A;  1ZYR D;  1T6J A;  1R9T A;  4FBS A;  2B63 A;  1K83 A;  3LR8 A;  4C2M A;  2O5J D;  1TWA A;  2N1D B;  2VK9 A;  1TWH A;  2R7Z A;  3FKI A;  2A6E D;  3EZB A;  5IZ2 A;  1SFO A;  2LYI A;  2FIP A;  4C6G A;  1I3Q A;  1Y1V A;  2EZC A;  4C5R A;  2YII A;  1YNJ D;  2R93 A; 
#chains in the Genus database with same CATH homology
 2E2I A;  3GTK A;  1Y1W A;  2N3E A;  2X0P A;  3GTP A;  2Y0N A;  4CEI A;  2BE5 D;  2LPJ A;  2A69 D;  2VUM A;  1IW7 D;  3CQZ A;  2FIO A;  2K3O A;  2LPI A;  2MX9 A;  1TWC A;  2NVX A;  3LR6 A;  3LR2 A;  3GTM A;  2K3N A;  3GTO A;  3U44 A;  2E2H A;  2LKM B;  1SMY D;  1TWG A;  3U4Q A;  2NVY A;  2F5J A;  3GTG A;  2CW0 D;  4CEH A;  2JA7 A;  2LTH A;  2AQL A;  2MX8 A;  3GTJ A;  2YU9 A;  3LRD A;  3GTL A;  1WCM A;  2R92 A;  2K3Q A;  2MQA A;  2JA5 A;  4CEJ A;  2A68 D;  1I6V D;  1YNN D;  1I50 A;  2X0Q A;  2A6H D;  1HQM D;  2X0O A;  4QIW A;  3GTQ A;  2JA6 A;  1TWF A;  3H0G A;  1ZYR D;  1R9T A;  4FBS A;  2B63 A;  1K83 A;  3LR8 A;  4C2M A;  2O5J D;  1TWA A;  2N1D B;  2VK9 A;  1TWH A;  2R7Z A;  3FKI A;  2A6E D;  5IZ2 A;  1SFO A;  2LYI A;  2FIP A;  1I3Q A;  1Y1V A;  1YNJ D;  2R93 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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