2Y0NA

Crystal structure of the complex between dosage compensation factors msl1 and msl3
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
194
structure length
165
Chain Sequence
TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSAAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords MALE-SPECIFIC LETHAL 3 HOMOLOG
publication title Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transcription
total genus 49
structure length 165
sequence length 194
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2010-12-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2y0nA00
2AQLA 2Y0NA 2F5JA 2LKMB 2N1DB
chains in the Genus database with same CATH superfamily
3EZAA 1TWFA 1W27A 1TWGA 2E2IA 1YNND 1SMYD 1R9TA 2AQLA 3FKIA 2O5JD 2R92A 2MX9A 2HWGA 4C5SA 1ZYMA 2N1DB 3EZBA 4FBSA 2JA6A 2R7ZA 1T6PA 3H0GA 1IW7D 1I50A 2F5JA 2A6ED 2X0PA 4BABA 4V2RA 1TWCA 2MX8A 2NVXA 3LR8A 2LTHA 2EZCA 2MP0A 2K3OA 4CEJA 3GTMA 4C2MA 3GTJA 3GTGA 2A68D 4C5RA 3GTLA 3LR6A 2X0OA 1TWHA 2Y0NA 3U44A 2EZBA 3LR2A 1EZBA 1TWAA 2LKMB 1Y1WA 1I3QA 2A69D 4C6GA 1EZAA 2VUMA 1SFOA 5IZ2A 2B63A 3GTPA 2FIPA 2MQAA 2VK9A 4CQ5A 2NVYA 1K83A 2BE5D 4CEHA 4BAAA 2E2HA 2R93A 2X0QA 2EZAA 2JA7A 3GTQA 2FIOA 2LYIA 2K3NA 3NZ4A 1ZYRD 1WCMA 2LPJA 1YNJD 4V2QA 2YIIA 3LRDA 4QIWA 1Y1VA 2A6HD 2K3QA 3GTOA 1T6JA 2HROA 3CQZA 2N3EA 1Y2MA 1I6VD 2YU9A 3GTKA 4C5UA 3U4QA 1HQMD 2LPIA 3EZEA 4CEIA 2CW0D 2JA5A
chains in the Genus database with same CATH topology
1TWFA 1TWGA 2E2IA 1YNND 1SMYD 1R9TA 2AQLA 3FKIA 2O5JD 2R92A 2MX9A 2N1DB 4FBSA 2JA6A 2R7ZA 3H0GA 1IW7D 1I50A 2F5JA 2A6ED 2X0PA 1TWCA 2MX8A 2NVXA 3LR8A 2LTHA 2K3OA 4CEJA 3GTMA 4C2MA 3GTJA 3GTGA 2A68D 3GTLA 3LR6A 2X0OA 1TWHA 2Y0NA 3U44A 3LR2A 1TWAA 2LKMB 1Y1WA 1I3QA 2A69D 2VUMA 1SFOA 5IZ2A 2B63A 3GTPA 2FIPA 2MQAA 2VK9A 2NVYA 1K83A 2BE5D 4CEHA 2E2HA 2R93A 2X0QA 2JA7A 3GTQA 2FIOA 2LYIA 2K3NA 1ZYRD 1WCMA 2LPJA 1YNJD 3LRDA 4QIWA 1Y1VA 2A6HD 2K3QA 3GTOA 3CQZA 2N3EA 1I6VD 2YU9A 3GTKA 3U4QA 1HQMD 2LPIA 4CEIA 2CW0D 2JA5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AQL A;  2Y0N A;  2F5J A;  2LKM B;  2N1D B; 
#chains in the Genus database with same CATH topology
 3EZA A;  1TWF A;  1W27 A;  1TWG A;  2E2I A;  1YNN D;  1SMY D;  1R9T A;  2AQL A;  3FKI A;  2O5J D;  2R92 A;  2MX9 A;  2HWG A;  4C5S A;  1ZYM A;  2N1D B;  3EZB A;  4FBS A;  2JA6 A;  2R7Z A;  1T6P A;  3H0G A;  1IW7 D;  1I50 A;  2F5J A;  2A6E D;  2X0P A;  4BAB A;  4V2R A;  1TWC A;  2MX8 A;  2NVX A;  3LR8 A;  2LTH A;  2EZC A;  2MP0 A;  2K3O A;  4CEJ A;  3GTM A;  4C2M A;  3GTJ A;  3GTG A;  2A68 D;  4C5R A;  3GTL A;  3LR6 A;  2X0O A;  1TWH A;  2Y0N A;  3U44 A;  2EZB A;  3LR2 A;  1EZB A;  1TWA A;  2LKM B;  1Y1W A;  1I3Q A;  2A69 D;  4C6G A;  1EZA A;  2VUM A;  1SFO A;  5IZ2 A;  2B63 A;  3GTP A;  2FIP A;  2MQA A;  2VK9 A;  4CQ5 A;  2NVY A;  1K83 A;  2BE5 D;  4CEH A;  4BAA A;  2E2H A;  2R93 A;  2X0Q A;  2EZA A;  2JA7 A;  3GTQ A;  2FIO A;  2LYI A;  2K3N A;  3NZ4 A;  1ZYR D;  1WCM A;  2LPJ A;  1YNJ D;  4V2Q A;  2YII A;  3LRD A;  4QIW A;  1Y1V A;  2A6H D;  2K3Q A;  3GTO A;  1T6J A;  2HRO A;  3CQZ A;  2N3E A;  1Y2M A;  1I6V D;  2YU9 A;  3GTK A;  4C5U A;  3U4Q A;  1HQM D;  2LPI A;  3EZE A;  4CEI A;  2CW0 D;  2JA5 A; 
#chains in the Genus database with same CATH homology
 1TWF A;  1TWG A;  2E2I A;  1YNN D;  1SMY D;  1R9T A;  2AQL A;  3FKI A;  2O5J D;  2R92 A;  2MX9 A;  2N1D B;  4FBS A;  2JA6 A;  2R7Z A;  3H0G A;  1IW7 D;  1I50 A;  2F5J A;  2A6E D;  2X0P A;  1TWC A;  2MX8 A;  2NVX A;  3LR8 A;  2LTH A;  2K3O A;  4CEJ A;  3GTM A;  4C2M A;  3GTJ A;  3GTG A;  2A68 D;  3GTL A;  3LR6 A;  2X0O A;  1TWH A;  2Y0N A;  3U44 A;  3LR2 A;  1TWA A;  2LKM B;  1Y1W A;  1I3Q A;  2A69 D;  2VUM A;  1SFO A;  5IZ2 A;  2B63 A;  3GTP A;  2FIP A;  2MQA A;  2VK9 A;  2NVY A;  1K83 A;  2BE5 D;  4CEH A;  2E2H A;  2R93 A;  2X0Q A;  2JA7 A;  3GTQ A;  2FIO A;  2LYI A;  2K3N A;  1ZYR D;  1WCM A;  2LPJ A;  1YNJ D;  3LRD A;  4QIW A;  1Y1V A;  2A6H D;  2K3Q A;  3GTO A;  3CQZ A;  2N3E A;  1I6V D;  2YU9 A;  3GTK A;  3U4Q A;  1HQM D;  2LPI A;  4CEI A;  2CW0 D;  2JA5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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