2N1DB

Solution structure of the mrg15-mrgbp complex
Total Genus 54
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
172
structure length
172
Chain Sequence
SNAEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKAV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Protein binding
molecule keywords MRG/MORF4L-binding protein
publication title Structural Basis for Multi-specificity of MRG Domains.
pubmed doi rcsb
source organism Homo sapiens
total genus 54
structure length 172
sequence length 172
ec nomenclature
pdb deposition date 2015-03-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2n1dB00
2F5JA 2N1DB 2AQLA 2LKMB 2Y0NA
chains in the Genus database with same CATH superfamily
2HWGA 1WCMA 2LPIA 2AQLA 3GTMA 1Y2MA 2FIPA 2NVXA 2F5JA 4C5RA 2E2IA 1EZBA 2A69D 1SFOA 2MP0A 2JA5A 1TWFA 2X0PA 2NVYA 3U4QA 4CEHA 4CEJA 4V2RA 2EZBA 2HROA 2JA7A 3EZBA 1T6JA 2LKMB 2MX8A 2MX9A 1YNJD 2N1DB 1I6VD 4CQ5A 2A6HD 1TWCA 4V2QA 2E2HA 2JA6A 1K83A 2LYIA 3LR6A 2R93A 2LPJA 2BE5D 2EZCA 3FKIA 3GTLA 3H0GA 1SMYD 1TWHA 2K3OA 3EZEA 1TWGA 2A68D 2O5JD 2CW0D 2LTHA 2X0QA 5IZ2A 3LR2A 2VK9A 3GTPA 1T6PA 2B63A 2R7ZA 2N3EA 1Y1WA 2Y0NA 3LRDA 2YIIA 4C6GA 1I3QA 4C5UA 3GTJA 3NZ4A 1I50A 1IW7D 3EZAA 3LR8A 3GTOA 1Y1VA 2YU9A 1ZYMA 2FIOA 1ZYRD 2R92A 4BABA 3GTGA 1W27A 1YNND 2X0OA 3GTKA 4C5SA 4BAAA 4C2MA 1HQMD 3U44A 2K3NA 2MQAA 1TWAA 2VUMA 3CQZA 4QIWA 4FBSA 2K3QA 2A6ED 3GTQA 4CEIA 1R9TA 2EZAA 1EZAA
chains in the Genus database with same CATH topology
1WCMA 2LPIA 2AQLA 3GTMA 2FIPA 2NVXA 2F5JA 2E2IA 2A69D 1SFOA 2JA5A 1TWFA 2X0PA 2NVYA 3U4QA 4CEHA 4CEJA 2JA7A 2LKMB 2MX8A 2MX9A 1YNJD 2N1DB 1I6VD 2A6HD 1TWCA 2E2HA 2JA6A 1K83A 2LYIA 3LR6A 2R93A 2LPJA 2BE5D 3FKIA 3GTLA 3H0GA 1SMYD 1TWHA 2K3OA 1TWGA 2A68D 2O5JD 2CW0D 2LTHA 2X0QA 5IZ2A 3LR2A 2VK9A 3GTPA 2B63A 2R7ZA 2N3EA 1Y1WA 2Y0NA 3LRDA 1I3QA 3GTJA 1I50A 1IW7D 3LR8A 3GTOA 1Y1VA 2YU9A 2FIOA 1ZYRD 2R92A 3GTGA 1YNND 2X0OA 3GTKA 4C2MA 1HQMD 3U44A 2K3NA 2MQAA 1TWAA 2VUMA 3CQZA 4QIWA 4FBSA 2K3QA 2A6ED 3GTQA 4CEIA 1R9TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F5J A;  2N1D B;  2AQL A;  2LKM B;  2Y0N A; 
#chains in the Genus database with same CATH topology
 2HWG A;  1WCM A;  2LPI A;  2AQL A;  3GTM A;  1Y2M A;  2FIP A;  2NVX A;  2F5J A;  4C5R A;  2E2I A;  1EZB A;  2A69 D;  1SFO A;  2MP0 A;  2JA5 A;  1TWF A;  2X0P A;  2NVY A;  3U4Q A;  4CEH A;  4CEJ A;  4V2R A;  2EZB A;  2HRO A;  2JA7 A;  3EZB A;  1T6J A;  2LKM B;  2MX8 A;  2MX9 A;  1YNJ D;  2N1D B;  1I6V D;  4CQ5 A;  2A6H D;  1TWC A;  4V2Q A;  2E2H A;  2JA6 A;  1K83 A;  2LYI A;  3LR6 A;  2R93 A;  2LPJ A;  2BE5 D;  2EZC A;  3FKI A;  3GTL A;  3H0G A;  1SMY D;  1TWH A;  2K3O A;  3EZE A;  1TWG A;  2A68 D;  2O5J D;  2CW0 D;  2LTH A;  2X0Q A;  5IZ2 A;  3LR2 A;  2VK9 A;  3GTP A;  1T6P A;  2B63 A;  2R7Z A;  2N3E A;  1Y1W A;  2Y0N A;  3LRD A;  2YII A;  4C6G A;  1I3Q A;  4C5U A;  3GTJ A;  3NZ4 A;  1I50 A;  1IW7 D;  3EZA A;  3LR8 A;  3GTO A;  1Y1V A;  2YU9 A;  1ZYM A;  2FIO A;  1ZYR D;  2R92 A;  4BAB A;  3GTG A;  1W27 A;  1YNN D;  2X0O A;  3GTK A;  4C5S A;  4BAA A;  4C2M A;  1HQM D;  3U44 A;  2K3N A;  2MQA A;  1TWA A;  2VUM A;  3CQZ A;  4QIW A;  4FBS A;  2K3Q A;  2A6E D;  3GTQ A;  4CEI A;  1R9T A;  2EZA A;  1EZA A; 
#chains in the Genus database with same CATH homology
 1WCM A;  2LPI A;  2AQL A;  3GTM A;  2FIP A;  2NVX A;  2F5J A;  2E2I A;  2A69 D;  1SFO A;  2JA5 A;  1TWF A;  2X0P A;  2NVY A;  3U4Q A;  4CEH A;  4CEJ A;  2JA7 A;  2LKM B;  2MX8 A;  2MX9 A;  1YNJ D;  2N1D B;  1I6V D;  2A6H D;  1TWC A;  2E2H A;  2JA6 A;  1K83 A;  2LYI A;  3LR6 A;  2R93 A;  2LPJ A;  2BE5 D;  3FKI A;  3GTL A;  3H0G A;  1SMY D;  1TWH A;  2K3O A;  1TWG A;  2A68 D;  2O5J D;  2CW0 D;  2LTH A;  2X0Q A;  5IZ2 A;  3LR2 A;  2VK9 A;  3GTP A;  2B63 A;  2R7Z A;  2N3E A;  1Y1W A;  2Y0N A;  3LRD A;  1I3Q A;  3GTJ A;  1I50 A;  1IW7 D;  3LR8 A;  3GTO A;  1Y1V A;  2YU9 A;  2FIO A;  1ZYR D;  2R92 A;  3GTG A;  1YNN D;  2X0O A;  3GTK A;  4C2M A;  1HQM D;  3U44 A;  2K3N A;  2MQA A;  1TWA A;  2VUM A;  3CQZ A;  4QIW A;  4FBS A;  2K3Q A;  2A6E D;  3GTQ A;  4CEI A;  1R9T A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...