2Y0NA

Crystal structure of the complex between dosage compensation factors msl1 and msl3
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
194
structure length
165
Chain Sequence
TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSAAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
source organism Homo sapiens
publication title Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
pubmed doi rcsb
molecule keywords MALE-SPECIFIC LETHAL 3 HOMOLOG
total genus 49
structure length 165
sequence length 194
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2010-12-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2y0nA00
2F5JA 2LKMB 2Y0NA 2N1DB 2AQLA
chains in the Genus database with same CATH superfamily
1R9TA 2MX9A 1K83A 3LR6A 4V2QA 1I3QA 2X0QA 2JA5A 1Y1WA 2YU9A 1W27A 2BE5D 2X0PA 4CEJA 2FIPA 2LPJA 3NZ4A 2EZCA 2LYIA 2R92A 3U44A 3GTGA 1SMYD 4V2RA 4C2MA 2A68D 2N1DB 2NVXA 4C5SA 2A69D 2R7ZA 1EZBA 3GTQA 3GTMA 3GTJA 2EZBA 2K3QA 1WCMA 2O5JD 2EZAA 2MX8A 3GTKA 2YIIA 2F5JA 2K3OA 3EZBA 4C6GA 1EZAA 1TWCA 3EZAA 1Y2MA 2FIOA 1T6PA 3FKIA 1SFOA 3GTLA 3U4QA 4FBSA 3EZEA 2MP0A 2AQLA 1YNND 4CQ5A 2NVYA 2R93A 1Y1VA 4C5UA 2A6HD 4BABA 2K3NA 1ZYRD 3LR8A 2B63A 2VUMA 2JA6A 2MQAA 4BAAA 1YNJD 1IW7D 2E2IA 1TWHA 2N3EA 2Y0NA 2A6ED 3H0GA 1I6VD 5IZ2A 1ZYMA 4CEIA 1TWGA 2CW0D 3GTPA 1T6JA 2HWGA 1TWAA 2HROA 2E2HA 1TWFA 2VK9A 3LRDA 3GTOA 3CQZA 2LPIA 3LR2A 2LTHA 2LKMB 1HQMD 2X0OA 4QIWA 1I50A 4CEHA 4C5RA 2JA7A
chains in the Genus database with same CATH topology
1R9TA 2MX9A 1K83A 3LR6A 1I3QA 2X0QA 2JA5A 1Y1WA 2YU9A 2BE5D 2X0PA 4CEJA 2FIPA 2LPJA 2LYIA 2R92A 3U44A 3GTGA 1SMYD 4C2MA 2A68D 2N1DB 2NVXA 2A69D 2R7ZA 3GTQA 3GTMA 3GTJA 2K3QA 1WCMA 2O5JD 2MX8A 3GTKA 2F5JA 2K3OA 1TWCA 2FIOA 3FKIA 1SFOA 3GTLA 3U4QA 4FBSA 2AQLA 1YNND 2NVYA 2R93A 1Y1VA 2K3NA 1ZYRD 3LR8A 2B63A 2VUMA 2JA6A 2MQAA 1YNJD 1IW7D 2E2IA 1TWHA 2N3EA 2Y0NA 2A6ED 3H0GA 1I6VD 5IZ2A 4CEIA 1TWGA 2CW0D 3GTPA 1TWAA 2E2HA 1TWFA 2VK9A 3LRDA 3GTOA 3CQZA 2LPIA 3LR2A 2LTHA 2LKMB 1HQMD 2X0OA 4QIWA 1I50A 4CEHA 2A6HD 2JA7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F5J A;  2LKM B;  2Y0N A;  2N1D B;  2AQL A; 
#chains in the Genus database with same CATH topology
 1R9T A;  2MX9 A;  1K83 A;  3LR6 A;  4V2Q A;  1I3Q A;  2X0Q A;  2JA5 A;  1Y1W A;  2YU9 A;  1W27 A;  2BE5 D;  2X0P A;  4CEJ A;  2FIP A;  2LPJ A;  3NZ4 A;  2EZC A;  2LYI A;  2R92 A;  3U44 A;  3GTG A;  1SMY D;  4V2R A;  4C2M A;  2A68 D;  2N1D B;  2NVX A;  4C5S A;  2A69 D;  2R7Z A;  1EZB A;  3GTQ A;  3GTM A;  3GTJ A;  2EZB A;  2K3Q A;  1WCM A;  2O5J D;  2EZA A;  2MX8 A;  3GTK A;  2YII A;  2F5J A;  2K3O A;  3EZB A;  4C6G A;  1EZA A;  1TWC A;  3EZA A;  1Y2M A;  2FIO A;  1T6P A;  3FKI A;  1SFO A;  3GTL A;  3U4Q A;  4FBS A;  3EZE A;  2MP0 A;  2AQL A;  1YNN D;  4CQ5 A;  2NVY A;  2R93 A;  1Y1V A;  4C5U A;  2A6H D;  4BAB A;  2K3N A;  1ZYR D;  3LR8 A;  2B63 A;  2VUM A;  2JA6 A;  2MQA A;  4BAA A;  1YNJ D;  1IW7 D;  2E2I A;  1TWH A;  2N3E A;  2Y0N A;  2A6E D;  3H0G A;  1I6V D;  5IZ2 A;  1ZYM A;  4CEI A;  1TWG A;  2CW0 D;  3GTP A;  1T6J A;  2HWG A;  1TWA A;  2HRO A;  2E2H A;  1TWF A;  2VK9 A;  3LRD A;  3GTO A;  3CQZ A;  2LPI A;  3LR2 A;  2LTH A;  2LKM B;  1HQM D;  2X0O A;  4QIW A;  1I50 A;  4CEH A;  4C5R A;  2JA7 A; 
#chains in the Genus database with same CATH homology
 1R9T A;  2MX9 A;  1K83 A;  3LR6 A;  1I3Q A;  2X0Q A;  2JA5 A;  1Y1W A;  2YU9 A;  2BE5 D;  2X0P A;  4CEJ A;  2FIP A;  2LPJ A;  2LYI A;  2R92 A;  3U44 A;  3GTG A;  1SMY D;  4C2M A;  2A68 D;  2N1D B;  2NVX A;  2A69 D;  2R7Z A;  3GTQ A;  3GTM A;  3GTJ A;  2K3Q A;  1WCM A;  2O5J D;  2MX8 A;  3GTK A;  2F5J A;  2K3O A;  1TWC A;  2FIO A;  3FKI A;  1SFO A;  3GTL A;  3U4Q A;  4FBS A;  2AQL A;  1YNN D;  2NVY A;  2R93 A;  1Y1V A;  2K3N A;  1ZYR D;  3LR8 A;  2B63 A;  2VUM A;  2JA6 A;  2MQA A;  1YNJ D;  1IW7 D;  2E2I A;  1TWH A;  2N3E A;  2Y0N A;  2A6E D;  3H0G A;  1I6V D;  5IZ2 A;  4CEI A;  1TWG A;  2CW0 D;  3GTP A;  1TWA A;  2E2H A;  1TWF A;  2VK9 A;  3LRD A;  3GTO A;  3CQZ A;  2LPI A;  3LR2 A;  2LTH A;  2LKM B;  1HQM D;  2X0O A;  4QIW A;  1I50 A;  4CEH A;  2A6H D;  2JA7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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