2Y0NA

Crystal structure of the complex between dosage compensation factors msl1 and msl3
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
194
structure length
165
Chain Sequence
TITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSAAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
source organism Homo sapiens
publication title Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
pubmed doi rcsb
molecule keywords MALE-SPECIFIC LETHAL 3 HOMOLOG
total genus 49
structure length 165
sequence length 194
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2010-12-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.274.30 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2y0nA00
2AQLA 2Y0NA 2LKMB 2F5JA 2N1DB
chains in the Genus database with same CATH superfamily
2JA6A 2MP0A 2E2IA 2R93A 3GTMA 1I3QA 4BABA 2R7ZA 1Y2MA 4FBSA 3U4QA 3GTQA 2K3QA 2B63A 1TWAA 2LYIA 4BAAA 1Y1WA 2JA7A 1TWGA 2BE5D 4CEHA 3GTPA 3U44A 2F5JA 2O5JD 3FKIA 2EZBA 3GTGA 3LR2A 1IW7D 2X0PA 1TWHA 3EZBA 3NZ4A 2A69D 3GTOA 3GTJA 3H0GA 2NVXA 2CW0D 2HWGA 1R9TA 2MQAA 2HROA 3EZEA 2FIOA 4C6GA 4C2MA 4V2RA 3GTLA 3LR6A 4CEJA 4QIWA 1WCMA 1Y1VA 2JA5A 1ZYRD 2AQLA 1SFOA 2LKMB 2NVYA 2FIPA 5IZ2A 2K3OA 2YU9A 2X0QA 1SMYD 1I6VD 1W27A 2EZCA 2YIIA 1TWCA 4V2QA 2LPJA 2LTHA 4C5SA 4C5RA 1T6PA 3LRDA 1T6JA 1TWFA 1I50A 4C5UA 1HQMD 4CEIA 2K3NA 2VK9A 2A6HD 1YNND 3EZAA 1K83A 3CQZA 2X0OA 1YNJD 2MX9A 2E2HA 2EZAA 1EZAA 2Y0NA 3LR8A 3GTKA 4CQ5A 2VUMA 2MX8A 2LPIA 2A6ED 1ZYMA 1EZBA 2A68D 2N3EA 2R92A 2N1DB
chains in the Genus database with same CATH topology
2JA6A 2E2IA 2R93A 3GTMA 1I3QA 2R7ZA 4FBSA 3U4QA 3GTQA 2N1DB 2K3QA 2B63A 1TWAA 2LYIA 1Y1WA 2JA7A 3GTPA 1TWGA 2BE5D 4CEHA 3U44A 2F5JA 2O5JD 3FKIA 3GTGA 3LR2A 1IW7D 2X0PA 1TWHA 2A69D 3GTOA 3GTJA 3H0GA 2NVXA 2CW0D 1R9TA 2MQAA 2FIOA 3GTLA 3LR6A 4CEJA 4QIWA 1WCMA 1Y1VA 2JA5A 1ZYRD 2AQLA 1SFOA 2LKMB 2NVYA 2FIPA 5IZ2A 2K3OA 2YU9A 2X0QA 1SMYD 1I6VD 1TWCA 2LPJA 2LTHA 3LRDA 1TWFA 1I50A 1HQMD 4CEIA 2K3NA 2VK9A 2A6HD 1YNND 1K83A 3CQZA 2X0OA 1YNJD 2MX9A 2E2HA 2Y0NA 3LR8A 3GTKA 2VUMA 2MX8A 2LPIA 2A6ED 2A68D 2N3EA 2R92A 4C2MA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AQL A;  2Y0N A;  2LKM B;  2F5J A;  2N1D B; 
#chains in the Genus database with same CATH topology
 2JA6 A;  2MP0 A;  2E2I A;  2R93 A;  3GTM A;  1I3Q A;  4BAB A;  2R7Z A;  1Y2M A;  4FBS A;  3U4Q A;  3GTQ A;  2K3Q A;  2B63 A;  1TWA A;  2LYI A;  4BAA A;  1Y1W A;  2JA7 A;  1TWG A;  2BE5 D;  4CEH A;  3GTP A;  3U44 A;  2F5J A;  2O5J D;  3FKI A;  2EZB A;  3GTG A;  3LR2 A;  1IW7 D;  2X0P A;  1TWH A;  3EZB A;  3NZ4 A;  2A69 D;  3GTO A;  3GTJ A;  3H0G A;  2NVX A;  2CW0 D;  2HWG A;  1R9T A;  2MQA A;  2HRO A;  3EZE A;  2FIO A;  4C6G A;  4C2M A;  4V2R A;  3GTL A;  3LR6 A;  4CEJ A;  4QIW A;  1WCM A;  1Y1V A;  2JA5 A;  1ZYR D;  2AQL A;  1SFO A;  2LKM B;  2NVY A;  2FIP A;  5IZ2 A;  2K3O A;  2YU9 A;  2X0Q A;  1SMY D;  1I6V D;  1W27 A;  2EZC A;  2YII A;  1TWC A;  4V2Q A;  2LPJ A;  2LTH A;  4C5S A;  4C5R A;  1T6P A;  3LRD A;  1T6J A;  1TWF A;  1I50 A;  4C5U A;  1HQM D;  4CEI A;  2K3N A;  2VK9 A;  2A6H D;  1YNN D;  3EZA A;  1K83 A;  3CQZ A;  2X0O A;  1YNJ D;  2MX9 A;  2E2H A;  2EZA A;  1EZA A;  2Y0N A;  3LR8 A;  3GTK A;  4CQ5 A;  2VUM A;  2MX8 A;  2LPI A;  2A6E D;  1ZYM A;  1EZB A;  2A68 D;  2N3E A;  2R92 A;  2N1D B; 
#chains in the Genus database with same CATH homology
 2JA6 A;  2E2I A;  2R93 A;  3GTM A;  1I3Q A;  2R7Z A;  4FBS A;  3U4Q A;  3GTQ A;  2N1D B;  2K3Q A;  2B63 A;  1TWA A;  2LYI A;  1Y1W A;  2JA7 A;  3GTP A;  1TWG A;  2BE5 D;  4CEH A;  3U44 A;  2F5J A;  2O5J D;  3FKI A;  3GTG A;  3LR2 A;  1IW7 D;  2X0P A;  1TWH A;  2A69 D;  3GTO A;  3GTJ A;  3H0G A;  2NVX A;  2CW0 D;  1R9T A;  2MQA A;  2FIO A;  3GTL A;  3LR6 A;  4CEJ A;  4QIW A;  1WCM A;  1Y1V A;  2JA5 A;  1ZYR D;  2AQL A;  1SFO A;  2LKM B;  2NVY A;  2FIP A;  5IZ2 A;  2K3O A;  2YU9 A;  2X0Q A;  1SMY D;  1I6V D;  1TWC A;  2LPJ A;  2LTH A;  3LRD A;  1TWF A;  1I50 A;  1HQM D;  4CEI A;  2K3N A;  2VK9 A;  2A6H D;  1YNN D;  1K83 A;  3CQZ A;  2X0O A;  1YNJ D;  2MX9 A;  2E2H A;  2Y0N A;  3LR8 A;  3GTK A;  2VUM A;  2MX8 A;  2LPI A;  2A6E D;  2A68 D;  2N3E A;  2R92 A;  4C2M A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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