5A45 | Genus

Total Genus 90

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	90
sequence length	226
structure length	217
Chain Sequence	GRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__8573983913021443__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__8573983913021443__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/5A45/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__8573983913021443__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"8573983913021443","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/5A45/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__8573983913021443__ ready

script 1 started

platformSpeed = 8

Viewer cachePut cache://localLOAD_/file/5d01415a93f625339ec31243/pdb.gz

Viewer cachePut https://genus.fuw.edu.pl/file/5d01415a93f625339ec31243/pdb.gz

FileManager.getAtomSetCollectionFromFile(/file/5d01415a93f625339ec31243/pdb.gz)

loadScript /static/js/j2s/core/corezip.z.js

The Resolver thinks Pdb

loadScript /static/js/j2s/core/corebio.z.js

Time for openFile(/file/5d01415a93f625339ec31243/pdb.gz): 1409 ms

reading 217 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

217 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 21 ms

Adding embedded #jmolscript: select ({0:216});backbone only;select *;

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Proton transport
publication title	Meshandcollect: An Automated Multi-Crystal Data-Collection Workflow for Synchrotron Macromolecular Crystallography Beamlines. pubmed doi rcsb
molecule keywords	BACTERIORHODOPSIN
total genus	90
structure length	217
sequence length	226
ec nomenclature
pdb deposition date	2015-06-05

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01036	Bac_rhodopsin	Bacteriorhodopsin-like protein

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhopdopsin 7-helix transmembrane proteins	5a45A00

5B0WA 3UZAA 3S3BB 5AX0A 4IAQA 4XXJA 4L6RA 3OE6A 5AZDA 1XJIA 1PY6A 1F4ZA 1O0AA 5TGZA 4BEZA 3VG9A 1IXFA 3ZEVA 1CWQA 1UCQA 4LDLA 3UZCA 1P8UA 3C9LA 2YDOA 4QRYA 3HASA 5B35A 1BRRA 3CODA 1EHKB 4XTOA 4XT3A 1F50A 4IARA 1KMEA 1P8IA 4HYJA 3A7KA 1H2SA 4GP8B 4G70B 5H2NA 4NC3A 3PDSA 3QJSB 3UTYA 4G7SB 5ITEA 3DQBA 3VHZA 4QIDA 1PXRA 1E0PA 5G53A 3NY9A 3NS0A 1X0I1 2YCXA 1R2NA 2VT4A 1QKPA 5C1MA 4TL3A 3KJ6A 4WW3A 1KG8A 4OV0A 4XTLA 5H2PA 3COCA 3REYA 5A45A 5FJGA 3EMLA 4FBZA 3D4SA 1IW9A 3ODUA 2F93A 3WQJA 5F8UA 4BWBA 2YCYA 3RZEA 4KLYA 4UHRA 5G2CA 4MD2A 1S53A 2Z73A 1R84A 4MD1A 1M0KA 5G36A 3PQRA 5H2JA 1XMEB 3QJVB 3UTWA 3CAPA 2KS9A 1DZEA 3ZPQA 1GZMA 2G87A 1C3WA 3MBVA 5B6WA 3QAPA 1H68A 2AT9A 4FA7B 2BRDA 5G2DA 4L35A 5H2LA 2LNLA 2I1XA 2YCWA 5AHYA 3NYAA 5J7AA 4G7QB 3VI0A 5JJEA 3X3BA 4WAVA 3OAXA 4Y9HA 4GP4B 4GYCA 4EJ4A 3QBGA 3PWHA 1JFPA 4IB4A 5H2IA 1PXSA 3VVKA 2ZIYA 4J4QA 4AMJA 2Z55A 1FBKA 3HARA 4G72B 4DAJA 4MQTA 3OE9A 5JJJA 2NTUA 4HWLA 5JJNA 1M0MA 4GP5B 3S3DB 2WJKA 1UAZA 2RH1A 2M3GA 1MGYA 3AM6A 5B34A 1F88A 4XT1A 3NSBA 4X1HA 5B6VA 3V2YA 4BUOA 1S8JA 3HAQA 5H2HA 4XTNA 1GUEA 3OE0A 5B6ZA 4DJHA 1JV6A 1JGJA 3PXOA 4EA3A 4KNFA 1U19A 3C9MA 5BR2A 2Y00A 5AHZA 2YDVA 1AT9A 2J4YA 1JV7A 3QAKA 3QBKA 4GRVA 5A44A 5LWEA 1TN0A 3RFMA 1AP9A 4FPDA 1VGOA 3BVDB 1S54A 3ABWA 2JAGA 3EH4B 4N4WA 2KSAA 3UONA 4GBRA 4FAAB 4X31A 4MQSA 2QPDB 3QBIA 3AYMA 4MBSA 5EN0A 5DHGA 3HAOA 3ZPRA 3VW7A 4LDEA 1S52A 2Y02A 4PXKA 1QKOA 3P0GA 1P8HA 4GPOA 1S51A 3PBLA 4K5YA 5B6YA 4DKLA 2YCZA 4UG2A 2WJLA 3UG9A 1IW6A 4LDOA 2HPYA 3S8FB 4X32A 3S8GB 2QPEB 1QM8A 5ETZA 1L0MA 4JQ6A 1C8RA 1TN5A 2ZFEA 4AMIA 4HYXA 5B6XA 3AYNA 4G7RB 2X72A 3SN6R 4BEYA 4EIYA 2R4SA 3DDLA 1Q5IA 5A8EA 1LN6A 3NY8A 3OE8A 5H2MA 5AWZA 4BVNA 2Y01A 2Y03A 1Q5JA 5G2AA 1BM1A 2R4RA 1E12A 1QHJA 1S8LA 5BR5A 2I20A 2NTWA 3QJRB 5H2KA 2Y04A 3EH5B 3VGAA 3EH3B 3UTVA 5KKHA 5DYSA 1BRDA 4JKVA 4PXFA 2F95A 3S3CB 2ZZLA 1VJMA 1X0SA 1HZXA 4QI1A 1X0K1 2KSBA 4A4MA 5AX1A 3HANA 1XIOA 4N4YB 5ITCA 4JR8A 2L6XA 2EI4A 1BRXA 2KSYA 5G28A 5G54A 4BV0A 3QJQB 1KGBA 4G71B 3X3CA 3HAPA 5DHHA 2JAFA 5B2NA 5H2OA 1KG9A 3QBLA 3QJTB 2PEDA 3QDCA 3T45A 1M0LA 3UTXA 2I35A 1FBBA 2I21A 3QJUB 1L9HA 1GU8A 4N6HA 1C8SA 3V2WA
chains in the Genus database with same CATH superfamily

5B0WA 3UZAA 3S3BB 5AX0A 4IAQA 4XXJA 4L6RA 3OE6A 5AZDA 1XJIA 1PY6A 1F4ZA 1O0AA 5TGZA 4BEZA 3VG9A 1IXFA 3ZEVA 1CWQA 1UCQA 4LDLA 3UZCA 1P8UA 3C9LA 2YDOA 4QRYA 3HASA 5B35A 1BRRA 3CODA 1EHKB 4XTOA 4XT3A 1F50A 4IARA 1KMEA 1P8IA 4HYJA 3A7KA 1H2SA 4GP8B 4G70B 5H2NA 4NC3A 3PDSA 3QJSB 3UTYA 4G7SB 5ITEA 3DQBA 3VHZA 4QIDA 1PXRA 1E0PA 5G53A 3NY9A 3NS0A 1X0I1 2YCXA 1R2NA 2VT4A 1QKPA 5C1MA 4TL3A 3KJ6A 4WW3A 1KG8A 4OV0A 4XTLA 5H2PA 3COCA 3REYA 5A45A 5FJGA 3EMLA 4FBZA 3D4SA 1IW9A 3ODUA 2F93A 3WQJA 5F8UA 4BWBA 2YCYA 3RZEA 4KLYA 4UHRA 5G2CA 4MD2A 1S53A 2Z73A 1R84A 4MD1A 1M0KA 5G36A 3PQRA 5H2JA 1XMEB 3QJVB 3UTWA 3CAPA 2KS9A 1DZEA 3ZPQA 1GZMA 2G87A 1C3WA 3MBVA 5B6WA 3QAPA 1H68A 2AT9A 4FA7B 2BRDA 5G2DA 4L35A 5H2LA 2LNLA 2I1XA 2YCWA 5AHYA 3NYAA 5J7AA 4G7QB 3VI0A 5JJEA 3X3BA 4WAVA 3OAXA 4Y9HA 4GP4B 4GYCA 4EJ4A 3QBGA 3PWHA 1JFPA 4IB4A 5H2IA 1PXSA 3VVKA 2ZIYA 4J4QA 4AMJA 2Z55A 1FBKA 3HARA 4G72B 4DAJA 4MQTA 3OE9A 5JJJA 2NTUA 4HWLA 5JJNA 1M0MA 4GP5B 3S3DB 2WJKA 1UAZA 2RH1A 2M3GA 1MGYA 3AM6A 5B34A 1F88A 4XT1A 3NSBA 4X1HA 5B6VA 3V2YA 4BUOA 1S8JA 3HAQA 5H2HA 4XTNA 1GUEA 3OE0A 5B6ZA 4DJHA 1JV6A 1JGJA 3PXOA 4EA3A 4KNFA 1U19A 3C9MA 5BR2A 2Y00A 5AHZA 2YDVA 1AT9A 2J4YA 1JV7A 3QAKA 3QBKA 4GRVA 5A44A 5LWEA 1TN0A 3RFMA 1AP9A 4FPDA 1VGOA 3BVDB 1S54A 3ABWA 2JAGA 3EH4B 4N4WA 2KSAA 3UONA 4GBRA 4FAAB 4X31A 4MQSA 2QPDB 3QBIA 3AYMA 4MBSA 5EN0A 5DHGA 3HAOA 3ZPRA 3VW7A 4LDEA 1S52A 2Y02A 4PXKA 1QKOA 3P0GA 1P8HA 4GPOA 1S51A 3PBLA 4K5YA 5B6YA 4DKLA 2YCZA 4UG2A 2WJLA 3UG9A 1IW6A 4LDOA 2HPYA 3S8FB 4X32A 3S8GB 2QPEB 1QM8A 5ETZA 1L0MA 4JQ6A 1C8RA 1TN5A 2ZFEA 4AMIA 4HYXA 5B6XA 3AYNA 4G7RB 2X72A 3SN6R 4BEYA 4EIYA 2R4SA 3DDLA 1Q5IA 5A8EA 1LN6A 3NY8A 3OE8A 5H2MA 5AWZA 4BVNA 2Y01A 2Y03A 1Q5JA 5G2AA 1BM1A 2R4RA 1E12A 1QHJA 1S8LA 5BR5A 2I20A 2NTWA 3QJRB 5H2KA 2Y04A 3EH5B 3VGAA 3EH3B 3UTVA 5KKHA 5DYSA 1BRDA 4JKVA 4PXFA 2F95A 3S3CB 2ZZLA 1VJMA 1X0SA 1HZXA 4QI1A 1X0K1 2KSBA 4A4MA 5AX1A 3HANA 1XIOA 4N4YB 5ITCA 4JR8A 2L6XA 2EI4A 1BRXA 2KSYA 5G28A 5G54A 4BV0A 3QJQB 4DS7E 1KGBA 4G71B 3X3CA 3HAPA 5DHHA 2JAFA 5B2NA 5H2OA 1KG9A 3QBLA 3QJTB 2PEDA 3QDCA 3T45A 1M0LA 3UTXA 2I35A 1FBBA 2I21A 3QJUB 1L9HA 1GU8A 4N6HA 1C8SA 3V2WA
chains in the Genus database with same CATH topology

5B0WA 3UZAA 3S3BB 5AX0A 4IAQA 4XXJA 4L6RA 3OE6A 5AZDA 1XJIA 1PY6A 1F4ZA 1O0AA 5TGZA 4BEZA 3VG9A 1IXFA 3ZEVA 1CWQA 1UCQA 4LDLA 3UZCA 1P8UA 3C9LA 2YDOA 4QRYA 3HASA 5B35A 1BRRA 3CODA 1EHKB 4XTOA 4XT3A 1F50A 4IARA 1KMEA 1P8IA 4HYJA 3A7KA 1H2SA 4GP8B 4G70B 5H2NA 4NC3A 3PDSA 3QJSB 3UTYA 4G7SB 5ITEA 3DQBA 3VHZA 4QIDA 1PXRA 1E0PA 5G53A 3NY9A 3NS0A 1X0I1 2YCXA 1R2NA 2VT4A 1QKPA 5C1MA 4TL3A 3KJ6A 4WW3A 1KG8A 4OV0A 4XTLA 5H2PA 3COCA 3REYA 5A45A 5FJGA 3EMLA 4FBZA 3D4SA 1IW9A 3ODUA 2F93A 3WQJA 5F8UA 4BWBA 2YCYA 3RZEA 4KLYA 4UHRA 5G2CA 4MD2A 1S53A 2Z73A 1R84A 4MD1A 1M0KA 5G36A 3PQRA 5H2JA 1XMEB 3QJVB 3UTWA 3CAPA 2KS9A 1DZEA 3ZPQA 1GZMA 2G87A 1C3WA 3MBVA 5B6WA 3QAPA 1H68A 2AT9A 4FA7B 2BRDA 5G2DA 4L35A 5H2LA 2LNLA 2I1XA 2YCWA 5AHYA 3NYAA 5J7AA 4G7QB 3VI0A 5JJEA 3X3BA 4WAVA 3OAXA 4Y9HA 4GP4B 4GYCA 4EJ4A 3QBGA 3PWHA 1JFPA 4IB4A 5H2IA 1PXSA 3VVKA 2ZIYA 4J4QA 4AMJA 2Z55A 1FBKA 3HARA 4G72B 4DAJA 4MQTA 3OE9A 5JJJA 2NTUA 4HWLA 5JJNA 1M0MA 4GP5B 3S3DB 2WJKA 1UAZA 2RH1A 2M3GA 1MGYA 3AM6A 5B34A 1F88A 4XT1A 3NSBA 4X1HA 5B6VA 3V2YA 4BUOA 1S8JA 3HAQA 5H2HA 4XTNA 1GUEA 3OE0A 5B6ZA 4DJHA 1JV6A 1JGJA 3PXOA 4EA3A 4KNFA 1U19A 3C9MA 5BR2A 2Y00A 5AHZA 2YDVA 1AT9A 2J4YA 1JV7A 3QAKA 3QBKA 4GRVA 5A44A 5LWEA 1TN0A 3RFMA 1AP9A 4FPDA 1VGOA 3BVDB 1S54A 3ABWA 2JAGA 3EH4B 4N4WA 2KSAA 3UONA 4GBRA 4FAAB 4X31A 4MQSA 2QPDB 3QBIA 3AYMA 4MBSA 5EN0A 5DHGA 3HAOA 3ZPRA 3VW7A 4LDEA 1S52A 2Y02A 4PXKA 1QKOA 3P0GA 1P8HA 4GPOA 1S51A 3PBLA 4K5YA 5B6YA 4DKLA 2YCZA 4UG2A 2WJLA 3UG9A 1IW6A 4LDOA 2HPYA 3S8FB 4X32A 3S8GB 2QPEB 1QM8A 5ETZA 1L0MA 4JQ6A 1C8RA 1TN5A 2ZFEA 4AMIA 4HYXA 5B6XA 3AYNA 4G7RB 2X72A 3SN6R 4BEYA 4EIYA 2R4SA 3DDLA 1Q5IA 5A8EA 1LN6A 3NY8A 3OE8A 5H2MA 5AWZA 4BVNA 2Y01A 2Y03A 1Q5JA 5G2AA 1BM1A 2R4RA 1E12A 1QHJA 1S8LA 5BR5A 2I20A 2NTWA 3QJRB 5H2KA 2Y04A 3EH5B 3VGAA 3EH3B 3UTVA 5KKHA 5DYSA 1BRDA 4JKVA 4PXFA 2F95A 3S3CB 2ZZLA 1VJMA 1X0SA 1HZXA 4QI1A 1X0K1 2KSBA 4A4MA 5AX1A 3HANA 1XIOA 4N4YB 5ITCA 4JR8A 2L6XA 2EI4A 1BRXA 2KSYA 5G28A 5G54A 4BV0A 3QJQB 4DS7E 1KGBA 4G71B 3X3CA 3HAPA 5DHHA 2JAFA 5B2NA 5H2OA 1KG9A 3QBLA 3QJTB 2PEDA 3QDCA 3T45A 1M0LA 3UTXA 2I35A 1FBBA 2I21A 3QJUB 1L9HA 1GU8A 4N6HA 1C8SA 3V2WA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 5B0W A;  3UZA A;  3S3B B;  5AX0 A;  4IAQ A;  4XXJ A;  4L6R A;  3OE6 A;  5AZD A;  1XJI A;  1PY6 A;  1F4Z A;  1O0A A;  5TGZ A;  4BEZ A;  3VG9 A;  1IXF A;  3ZEV A;  1CWQ A;  1UCQ A;  4LDL A;  3UZC A;  1P8U A;  3C9L A;  2YDO A;  4QRY A;  3HAS A;  5B35 A;  1BRR A;  3COD A;  1EHK B;  4XTO A;  4XT3 A;  1F50 A;  4IAR A;  1KME A;  1P8I A;  4HYJ A;  3A7K A;  1H2S A;  4GP8 B;  4G70 B;  5H2N A;  4NC3 A;  3PDS A;  3QJS B;  3UTY A;  4G7S B;  5ITE A;  3DQB A;  3VHZ A;  4QID A;  1PXR A;  1E0P A;  5G53 A;  3NY9 A;  3NS0 A;  1X0I 1;  2YCX A;  1R2N A;  2VT4 A;  1QKP A;  5C1M A;  4TL3 A;  3KJ6 A;  4WW3 A;  1KG8 A;  4OV0 A;  4XTL A;  5H2P A;  3COC A;  3REY A;  5A45 A;  5FJG A;  3EML A;  4FBZ A;  3D4S A;  1IW9 A;  3ODU A;  2F93 A;  3WQJ A;  5F8U A;  4BWB A;  2YCY A;  3RZE A;  4KLY A;  4UHR A;  5G2C A;  4MD2 A;  1S53 A;  2Z73 A;  1R84 A;  4MD1 A;  1M0K A;  5G36 A;  3PQR A;  5H2J A;  1XME B;  3QJV B;  3UTW A;  3CAP A;  2KS9 A;  1DZE A;  3ZPQ A;  1GZM A;  2G87 A;  1C3W A;  3MBV A;  5B6W A;  3QAP A;  1H68 A;  2AT9 A;  4FA7 B;  2BRD A;  5G2D A;  4L35 A;  5H2L A;  2LNL A;  2I1X A;  2YCW A;  5AHY A;  3NYA A;  5J7A A;  4G7Q B;  3VI0 A;  5JJE A;  3X3B A;  4WAV A;  3OAX A;  4Y9H A;  4GP4 B;  4GYC A;  4EJ4 A;  3QBG A;  3PWH A;  1JFP A;  4IB4 A;  5H2I A;  1PXS A;  3VVK A;  2ZIY A;  4J4Q A;  4AMJ A;  2Z55 A;  1FBK A;  3HAR A;  4G72 B;  4DAJ A;  4MQT A;  3OE9 A;  5JJJ A;  2NTU A;  4HWL A;  5JJN A;  1M0M A;  4GP5 B;  3S3D B;  2WJK A;  1UAZ A;  2RH1 A;  2M3G A;  1MGY A;  3AM6 A;  5B34 A;  1F88 A;  4XT1 A;  3NSB A;  4X1H A;  5B6V A;  3V2Y A;  4BUO A;  1S8J A;  3HAQ A;  5H2H A;  4XTN A;  1GUE A;  3OE0 A;  5B6Z A;  4DJH A;  1JV6 A;  1JGJ A;  3PXO A;  4EA3 A;  4KNF A;  1U19 A;  3C9M A;  5BR2 A;  2Y00 A;  5AHZ A;  2YDV A;  1AT9 A;  2J4Y A;  1JV7 A;  3QAK A;  3QBK A;  4GRV A;  5A44 A;  5LWE A;  1TN0 A;  3RFM A;  1AP9 A;  4FPD A;  1VGO A;  3BVD B;  1S54 A;  3ABW A;  2JAG A;  3EH4 B;  4N4W A;  2KSA A;  3UON A;  4GBR A;  4FAA B;  4X31 A;  4MQS A;  2QPD B;  3QBI A;  3AYM A;  4MBS A;  5EN0 A;  5DHG A;  3HAO A;  3ZPR A;  3VW7 A;  4LDE A;  1S52 A;  2Y02 A;  4PXK A;  1QKO A;  3P0G A;  1P8H A;  4GPO A;  1S51 A;  3PBL A;  4K5Y A;  5B6Y A;  4DKL A;  2YCZ A;  4UG2 A;  2WJL A;  3UG9 A;  1IW6 A;  4LDO A;  2HPY A;  3S8F B;  4X32 A;  3S8G B;  2QPE B;  1QM8 A;  5ETZ A;  1L0M A;  4JQ6 A;  1C8R A;  1TN5 A;  2ZFE A;  4AMI A;  4HYX A;  5B6X A;  3AYN A;  4G7R B;  2X72 A;  3SN6 R;  4BEY A;  4EIY A;  2R4S A;  3DDL A;  1Q5I A;  5A8E A;  1LN6 A;  3NY8 A;  3OE8 A;  5H2M A;  5AWZ A;  4BVN A;  2Y01 A;  2Y03 A;  1Q5J A;  5G2A A;  1BM1 A;  2R4R A;  1E12 A;  1QHJ A;  1S8L A;  5BR5 A;  2I20 A;  2NTW A;  3QJR B;  5H2K A;  2Y04 A;  3EH5 B;  3VGA A;  3EH3 B;  3UTV A;  5KKH A;  5DYS A;  1BRD A;  4JKV A;  4PXF A;  2F95 A;  3S3C B;  2ZZL A;  1VJM A;  1X0S A;  1HZX A;  4QI1 A;  1X0K 1;  2KSB A;  4A4M A;  5AX1 A;  3HAN A;  1XIO A;  4N4Y B;  5ITC A;  4JR8 A;  2L6X A;  2EI4 A;  1BRX A;  2KSY A;  5G28 A;  5G54 A;  4BV0 A;  3QJQ B;  1KGB A;  4G71 B;  3X3C A;  3HAP A;  5DHH A;  2JAF A;  5B2N A;  5H2O A;  1KG9 A;  3QBL A;  3QJT B;  2PED A;  3QDC A;  3T45 A;  1M0L A;  3UTX A;  2I35 A;  1FBB A;  2I21 A;  3QJU B;  1L9H A;  1GU8 A;  4N6H A;  1C8S A;  3V2W A; 
#chains in the Genus database with same CATH topology
 5B0W A;  3UZA A;  3S3B B;  5AX0 A;  4IAQ A;  4XXJ A;  4L6R A;  3OE6 A;  5AZD A;  1XJI A;  1PY6 A;  1F4Z A;  1O0A A;  5TGZ A;  4BEZ A;  3VG9 A;  1IXF A;  3ZEV A;  1CWQ A;  1UCQ A;  4LDL A;  3UZC A;  1P8U A;  3C9L A;  2YDO A;  4QRY A;  3HAS A;  5B35 A;  1BRR A;  3COD A;  1EHK B;  4XTO A;  4XT3 A;  1F50 A;  4IAR A;  1KME A;  1P8I A;  4HYJ A;  3A7K A;  1H2S A;  4GP8 B;  4G70 B;  5H2N A;  4NC3 A;  3PDS A;  3QJS B;  3UTY A;  4G7S B;  5ITE A;  3DQB A;  3VHZ A;  4QID A;  1PXR A;  1E0P A;  5G53 A;  3NY9 A;  3NS0 A;  1X0I 1;  2YCX A;  1R2N A;  2VT4 A;  1QKP A;  5C1M A;  4TL3 A;  3KJ6 A;  4WW3 A;  1KG8 A;  4OV0 A;  4XTL A;  5H2P A;  3COC A;  3REY A;  5A45 A;  5FJG A;  3EML A;  4FBZ A;  3D4S A;  1IW9 A;  3ODU A;  2F93 A;  3WQJ A;  5F8U A;  4BWB A;  2YCY A;  3RZE A;  4KLY A;  4UHR A;  5G2C A;  4MD2 A;  1S53 A;  2Z73 A;  1R84 A;  4MD1 A;  1M0K A;  5G36 A;  3PQR A;  5H2J A;  1XME B;  3QJV B;  3UTW A;  3CAP A;  2KS9 A;  1DZE A;  3ZPQ A;  1GZM A;  2G87 A;  1C3W A;  3MBV A;  5B6W A;  3QAP A;  1H68 A;  2AT9 A;  4FA7 B;  2BRD A;  5G2D A;  4L35 A;  5H2L A;  2LNL A;  2I1X A;  2YCW A;  5AHY A;  3NYA A;  5J7A A;  4G7Q B;  3VI0 A;  5JJE A;  3X3B A;  4WAV A;  3OAX A;  4Y9H A;  4GP4 B;  4GYC A;  4EJ4 A;  3QBG A;  3PWH A;  1JFP A;  4IB4 A;  5H2I A;  1PXS A;  3VVK A;  2ZIY A;  4J4Q A;  4AMJ A;  2Z55 A;  1FBK A;  3HAR A;  4G72 B;  4DAJ A;  4MQT A;  3OE9 A;  5JJJ A;  2NTU A;  4HWL A;  5JJN A;  1M0M A;  4GP5 B;  3S3D B;  2WJK A;  1UAZ A;  2RH1 A;  2M3G A;  1MGY A;  3AM6 A;  5B34 A;  1F88 A;  4XT1 A;  3NSB A;  4X1H A;  5B6V A;  3V2Y A;  4BUO A;  1S8J A;  3HAQ A;  5H2H A;  4XTN A;  1GUE A;  3OE0 A;  5B6Z A;  4DJH A;  1JV6 A;  1JGJ A;  3PXO A;  4EA3 A;  4KNF A;  1U19 A;  3C9M A;  5BR2 A;  2Y00 A;  5AHZ A;  2YDV A;  1AT9 A;  2J4Y A;  1JV7 A;  3QAK A;  3QBK A;  4GRV A;  5A44 A;  5LWE A;  1TN0 A;  3RFM A;  1AP9 A;  4FPD A;  1VGO A;  3BVD B;  1S54 A;  3ABW A;  2JAG A;  3EH4 B;  4N4W A;  2KSA A;  3UON A;  4GBR A;  4FAA B;  4X31 A;  4MQS A;  2QPD B;  3QBI A;  3AYM A;  4MBS A;  5EN0 A;  5DHG A;  3HAO A;  3ZPR A;  3VW7 A;  4LDE A;  1S52 A;  2Y02 A;  4PXK A;  1QKO A;  3P0G A;  1P8H A;  4GPO A;  1S51 A;  3PBL A;  4K5Y A;  5B6Y A;  4DKL A;  2YCZ A;  4UG2 A;  2WJL A;  3UG9 A;  1IW6 A;  4LDO A;  2HPY A;  3S8F B;  4X32 A;  3S8G B;  2QPE B;  1QM8 A;  5ETZ A;  1L0M A;  4JQ6 A;  1C8R A;  1TN5 A;  2ZFE A;  4AMI A;  4HYX A;  5B6X A;  3AYN A;  4G7R B;  2X72 A;  3SN6 R;  4BEY A;  4EIY A;  2R4S A;  3DDL A;  1Q5I A;  5A8E A;  1LN6 A;  3NY8 A;  3OE8 A;  5H2M A;  5AWZ A;  4BVN A;  2Y01 A;  2Y03 A;  1Q5J A;  5G2A A;  1BM1 A;  2R4R A;  1E12 A;  1QHJ A;  1S8L A;  5BR5 A;  2I20 A;  2NTW A;  3QJR B;  5H2K A;  2Y04 A;  3EH5 B;  3VGA A;  3EH3 B;  3UTV A;  5KKH A;  5DYS A;  1BRD A;  4JKV A;  4PXF A;  2F95 A;  3S3C B;  2ZZL A;  1VJM A;  1X0S A;  1HZX A;  4QI1 A;  1X0K 1;  2KSB A;  4A4M A;  5AX1 A;  3HAN A;  1XIO A;  4N4Y B;  5ITC A;  4JR8 A;  2L6X A;  2EI4 A;  1BRX A;  2KSY A;  5G28 A;  5G54 A;  4BV0 A;  3QJQ B;  4DS7 E;  1KGB A;  4G71 B;  3X3C A;  3HAP A;  5DHH A;  2JAF A;  5B2N A;  5H2O A;  1KG9 A;  3QBL A;  3QJT B;  2PED A;  3QDC A;  3T45 A;  1M0L A;  3UTX A;  2I35 A;  1FBB A;  2I21 A;  3QJU B;  1L9H A;  1GU8 A;  4N6H A;  1C8S A;  3V2W A; 
#chains in the Genus database with same CATH homology
 5B0W A;  3UZA A;  3S3B B;  5AX0 A;  4IAQ A;  4XXJ A;  4L6R A;  3OE6 A;  5AZD A;  1XJI A;  1PY6 A;  1F4Z A;  1O0A A;  5TGZ A;  4BEZ A;  3VG9 A;  1IXF A;  3ZEV A;  1CWQ A;  1UCQ A;  4LDL A;  3UZC A;  1P8U A;  3C9L A;  2YDO A;  4QRY A;  3HAS A;  5B35 A;  1BRR A;  3COD A;  1EHK B;  4XTO A;  4XT3 A;  1F50 A;  4IAR A;  1KME A;  1P8I A;  4HYJ A;  3A7K A;  1H2S A;  4GP8 B;  4G70 B;  5H2N A;  4NC3 A;  3PDS A;  3QJS B;  3UTY A;  4G7S B;  5ITE A;  3DQB A;  3VHZ A;  4QID A;  1PXR A;  1E0P A;  5G53 A;  3NY9 A;  3NS0 A;  1X0I 1;  2YCX A;  1R2N A;  2VT4 A;  1QKP A;  5C1M A;  4TL3 A;  3KJ6 A;  4WW3 A;  1KG8 A;  4OV0 A;  4XTL A;  5H2P A;  3COC A;  3REY A;  5A45 A;  5FJG A;  3EML A;  4FBZ A;  3D4S A;  1IW9 A;  3ODU A;  2F93 A;  3WQJ A;  5F8U A;  4BWB A;  2YCY A;  3RZE A;  4KLY A;  4UHR A;  5G2C A;  4MD2 A;  1S53 A;  2Z73 A;  1R84 A;  4MD1 A;  1M0K A;  5G36 A;  3PQR A;  5H2J A;  1XME B;  3QJV B;  3UTW A;  3CAP A;  2KS9 A;  1DZE A;  3ZPQ A;  1GZM A;  2G87 A;  1C3W A;  3MBV A;  5B6W A;  3QAP A;  1H68 A;  2AT9 A;  4FA7 B;  2BRD A;  5G2D A;  4L35 A;  5H2L A;  2LNL A;  2I1X A;  2YCW A;  5AHY A;  3NYA A;  5J7A A;  4G7Q B;  3VI0 A;  5JJE A;  3X3B A;  4WAV A;  3OAX A;  4Y9H A;  4GP4 B;  4GYC A;  4EJ4 A;  3QBG A;  3PWH A;  1JFP A;  4IB4 A;  5H2I A;  1PXS A;  3VVK A;  2ZIY A;  4J4Q A;  4AMJ A;  2Z55 A;  1FBK A;  3HAR A;  4G72 B;  4DAJ A;  4MQT A;  3OE9 A;  5JJJ A;  2NTU A;  4HWL A;  5JJN A;  1M0M A;  4GP5 B;  3S3D B;  2WJK A;  1UAZ A;  2RH1 A;  2M3G A;  1MGY A;  3AM6 A;  5B34 A;  1F88 A;  4XT1 A;  3NSB A;  4X1H A;  5B6V A;  3V2Y A;  4BUO A;  1S8J A;  3HAQ A;  5H2H A;  4XTN A;  1GUE A;  3OE0 A;  5B6Z A;  4DJH A;  1JV6 A;  1JGJ A;  3PXO A;  4EA3 A;  4KNF A;  1U19 A;  3C9M A;  5BR2 A;  2Y00 A;  5AHZ A;  2YDV A;  1AT9 A;  2J4Y A;  1JV7 A;  3QAK A;  3QBK A;  4GRV A;  5A44 A;  5LWE A;  1TN0 A;  3RFM A;  1AP9 A;  4FPD A;  1VGO A;  3BVD B;  1S54 A;  3ABW A;  2JAG A;  3EH4 B;  4N4W A;  2KSA A;  3UON A;  4GBR A;  4FAA B;  4X31 A;  4MQS A;  2QPD B;  3QBI A;  3AYM A;  4MBS A;  5EN0 A;  5DHG A;  3HAO A;  3ZPR A;  3VW7 A;  4LDE A;  1S52 A;  2Y02 A;  4PXK A;  1QKO A;  3P0G A;  1P8H A;  4GPO A;  1S51 A;  3PBL A;  4K5Y A;  5B6Y A;  4DKL A;  2YCZ A;  4UG2 A;  2WJL A;  3UG9 A;  1IW6 A;  4LDO A;  2HPY A;  3S8F B;  4X32 A;  3S8G B;  2QPE B;  1QM8 A;  5ETZ A;  1L0M A;  4JQ6 A;  1C8R A;  1TN5 A;  2ZFE A;  4AMI A;  4HYX A;  5B6X A;  3AYN A;  4G7R B;  2X72 A;  3SN6 R;  4BEY A;  4EIY A;  2R4S A;  3DDL A;  1Q5I A;  5A8E A;  1LN6 A;  3NY8 A;  3OE8 A;  5H2M A;  5AWZ A;  4BVN A;  2Y01 A;  2Y03 A;  1Q5J A;  5G2A A;  1BM1 A;  2R4R A;  1E12 A;  1QHJ A;  1S8L A;  5BR5 A;  2I20 A;  2NTW A;  3QJR B;  5H2K A;  2Y04 A;  3EH5 B;  3VGA A;  3EH3 B;  3UTV A;  5KKH A;  5DYS A;  1BRD A;  4JKV A;  4PXF A;  2F95 A;  3S3C B;  2ZZL A;  1VJM A;  1X0S A;  1HZX A;  4QI1 A;  1X0K 1;  2KSB A;  4A4M A;  5AX1 A;  3HAN A;  1XIO A;  4N4Y B;  5ITC A;  4JR8 A;  2L6X A;  2EI4 A;  1BRX A;  2KSY A;  5G28 A;  5G54 A;  4BV0 A;  3QJQ B;  4DS7 E;  1KGB A;  4G71 B;  3X3C A;  3HAP A;  5DHH A;  2JAF A;  5B2N A;  5H2O A;  1KG9 A;  3QBL A;  3QJT B;  2PED A;  3QDC A;  3T45 A;  1M0L A;  3UTX A;  2I35 A;  1FBB A;  2I21 A;  3QJU B;  1L9H A;  1GU8 A;  4N6H A;  1C8S A;  3V2W A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

5A45A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations