1G24A

The crystal structure of exoenzyme c3 from clostridium botulinum
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
211
structure length
211
Chain Sequence
AYSNTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords EXOENZYME C3
publication title Crystal structure and novel recognition motif of rho ADP-ribosylating C3 exoenzyme from Clostridium botulinum: structural insights for recognition specificity and catalysis.
pubmed doi rcsb
source organism Clostridium botulinum
total genus 67
structure length 211
sequence length 211
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2000-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1g24A00
2WN5A 1GXZA 2C8EE 4GY2A 1PWPA 4FMLA 5H03A 1J7NA 4H03A 4DV8A 2WN8A 1OJQA 5D1SA 4H0VA 1GIRA 4PKSA 1PWQA 2GWLA 5D1UA 4XSHB 1GXYA 5DZQA 1OG4A 2J3VA 1GIQA 2C8DA 4H0TA 4PKQA 4WF6A 1GY0A 1YQYA 1UZIA 2A78B 2BOVB 4TR5A 1G24A 4PKRA 2A9KB 2GWMA 1PWUA 2C8GA 2WN6A 4FXQA 2C8AA 4XSGB 4XM8A 1PWVA 2J3ZA 2C8FE 2C8HA 1QS2A 2C8CA 4H0XA 3BUZA 1GZFA 3BW8A 2WN7A 5GTTA 4XM6A 2J3XA 1QS1A 1R4BA 1GZEA 4XM7A 4GF1A 5BWMB 2C89A 1R45A 5H04A 4PKUA 1OG3A 5D1TA 1OG1A 4FK7A 1OJZA 4PKWA 1ZXVA 1JKYA 2C8BX 4PKVA 1PWWA 2WN4A 4ELNA 3U0JA 3NTSA 4H0YA 4PKTA
chains in the Genus database with same CATH superfamily
2WN5A 1GXZA 2C8EE 4GY2A 1PWPA 4FMLA 5H03A 1J7NA 4H03A 4DV8A 2WN8A 1OJQA 5D1SA 4H0VA 1GIRA 4PKSA 1PWQA 2GWLA 5D1UA 4XSHB 1GXYA 5DZQA 1OG4A 2J3VA 1GIQA 2C8DA 4H0TA 4PKQA 4WF6A 1GY0A 1YQYA 1UZIA 2A78B 2BOVB 4TR5A 1G24A 4PKRA 2A9KB 2GWMA 1PWUA 2C8GA 2WN6A 4FXQA 2C8AA 4XSGB 4XM8A 1PWVA 2J3ZA 2C8FE 2C8HA 1QS2A 2C8CA 4H0XA 3BUZA 1GZFA 3BW8A 2WN7A 5GTTA 4XM6A 2J3XA 1QS1A 1R4BA 1GZEA 4XM7A 4GF1A 5BWMB 2C89A 1R45A 5H04A 4PKUA 1OG3A 5D1TA 1OG1A 4FK7A 1OJZA 4PKWA 1ZXVA 1JKYA 2C8BX 4PKVA 1PWWA 2WN4A 4ELNA 3U0JA 3NTSA 4H0YA 4PKTA
chains in the Genus database with same CATH topology
2WN5A 1GXZA 2C8EE 4GY2A 1PWPA 4FMLA 5H03A 1J7NA 4H03A 4DV8A 2WN8A 1OJQA 5D1SA 4H0VA 1GIRA 4PKSA 1PWQA 2GWLA 5D1UA 4XSHB 1GXYA 5DZQA 1OG4A 2J3VA 1GIQA 2C8DA 4H0TA 4PKQA 4WF6A 1GY0A 1YQYA 1UZIA 2A78B 2BOVB 4TR5A 1G24A 4PKRA 2A9KB 2GWMA 1PWUA 2C8GA 2WN6A 4FXQA 2C8AA 4XSGB 4XM8A 1PWVA 2J3ZA 2C8FE 2C8HA 1QS2A 2C8CA 4H0XA 3BUZA 1GZFA 3BW8A 2WN7A 5GTTA 4XM6A 2J3XA 1QS1A 1R4BA 1GZEA 4XM7A 4GF1A 5BWMB 2C89A 1R45A 5H04A 4PKUA 1OG3A 5D1TA 1OG1A 4FK7A 1OJZA 4PKWA 1ZXVA 1JKYA 2C8BX 4PKVA 1PWWA 2WN4A 4ELNA 3U0JA 3NTSA 4H0YA 4PKTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WN5 A;  1GXZ A;  2C8E E;  4GY2 A;  1PWP A;  4FML A;  5H03 A;  1J7N A;  4H03 A;  4DV8 A;  2WN8 A;  1OJQ A;  5D1S A;  4H0V A;  1GIR A;  4PKS A;  1PWQ A;  2GWL A;  5D1U A;  4XSH B;  1GXY A;  5DZQ A;  1OG4 A;  2J3V A;  1GIQ A;  2C8D A;  4H0T A;  4PKQ A;  4WF6 A;  1GY0 A;  1YQY A;  1UZI A;  2A78 B;  2BOV B;  4TR5 A;  1G24 A;  4PKR A;  2A9K B;  2GWM A;  1PWU A;  2C8G A;  2WN6 A;  4FXQ A;  2C8A A;  4XSG B;  4XM8 A;  1PWV A;  2J3Z A;  2C8F E;  2C8H A;  1QS2 A;  2C8C A;  4H0X A;  3BUZ A;  1GZF A;  3BW8 A;  2WN7 A;  5GTT A;  4XM6 A;  2J3X A;  1QS1 A;  1R4B A;  1GZE A;  4XM7 A;  4GF1 A;  5BWM B;  2C89 A;  1R45 A;  5H04 A;  4PKU A;  1OG3 A;  5D1T A;  1OG1 A;  4FK7 A;  1OJZ A;  4PKW A;  1ZXV A;  1JKY A;  2C8B X;  4PKV A;  1PWW A;  2WN4 A;  4ELN A;  3U0J A;  3NTS A;  4H0Y A;  4PKT A; 
#chains in the Genus database with same CATH topology
 2WN5 A;  1GXZ A;  2C8E E;  4GY2 A;  1PWP A;  4FML A;  5H03 A;  1J7N A;  4H03 A;  4DV8 A;  2WN8 A;  1OJQ A;  5D1S A;  4H0V A;  1GIR A;  4PKS A;  1PWQ A;  2GWL A;  5D1U A;  4XSH B;  1GXY A;  5DZQ A;  1OG4 A;  2J3V A;  1GIQ A;  2C8D A;  4H0T A;  4PKQ A;  4WF6 A;  1GY0 A;  1YQY A;  1UZI A;  2A78 B;  2BOV B;  4TR5 A;  1G24 A;  4PKR A;  2A9K B;  2GWM A;  1PWU A;  2C8G A;  2WN6 A;  4FXQ A;  2C8A A;  4XSG B;  4XM8 A;  1PWV A;  2J3Z A;  2C8F E;  2C8H A;  1QS2 A;  2C8C A;  4H0X A;  3BUZ A;  1GZF A;  3BW8 A;  2WN7 A;  5GTT A;  4XM6 A;  2J3X A;  1QS1 A;  1R4B A;  1GZE A;  4XM7 A;  4GF1 A;  5BWM B;  2C89 A;  1R45 A;  5H04 A;  4PKU A;  1OG3 A;  5D1T A;  1OG1 A;  4FK7 A;  1OJZ A;  4PKW A;  1ZXV A;  1JKY A;  2C8B X;  4PKV A;  1PWW A;  2WN4 A;  4ELN A;  3U0J A;  3NTS A;  4H0Y A;  4PKT A; 
#chains in the Genus database with same CATH homology
 2WN5 A;  1GXZ A;  2C8E E;  4GY2 A;  1PWP A;  4FML A;  5H03 A;  1J7N A;  4H03 A;  4DV8 A;  2WN8 A;  1OJQ A;  5D1S A;  4H0V A;  1GIR A;  4PKS A;  1PWQ A;  2GWL A;  5D1U A;  4XSH B;  1GXY A;  5DZQ A;  1OG4 A;  2J3V A;  1GIQ A;  2C8D A;  4H0T A;  4PKQ A;  4WF6 A;  1GY0 A;  1YQY A;  1UZI A;  2A78 B;  2BOV B;  4TR5 A;  1G24 A;  4PKR A;  2A9K B;  2GWM A;  1PWU A;  2C8G A;  2WN6 A;  4FXQ A;  2C8A A;  4XSG B;  4XM8 A;  1PWV A;  2J3Z A;  2C8F E;  2C8H A;  1QS2 A;  2C8C A;  4H0X A;  3BUZ A;  1GZF A;  3BW8 A;  2WN7 A;  5GTT A;  4XM6 A;  2J3X A;  1QS1 A;  1R4B A;  1GZE A;  4XM7 A;  4GF1 A;  5BWM B;  2C89 A;  1R45 A;  5H04 A;  4PKU A;  1OG3 A;  5D1T A;  1OG1 A;  4FK7 A;  1OJZ A;  4PKW A;  1ZXV A;  1JKY A;  2C8B X;  4PKV A;  1PWW A;  2WN4 A;  4ELN A;  3U0J A;  3NTS A;  4H0Y A;  4PKT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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