1G24A

The crystal structure of exoenzyme c3 from clostridium botulinum
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
211
structure length
211
Chain Sequence
AYSNTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Clostridium botulinum
publication title Crystal structure and novel recognition motif of rho ADP-ribosylating C3 exoenzyme from Clostridium botulinum: structural insights for recognition specificity and catalysis.
pubmed doi rcsb
molecule keywords EXOENZYME C3
total genus 67
structure length 211
sequence length 211
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2000-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1g24A00
1J7NA 1ZXVA 4XM7A 1GIRA 3NTSA 5BWMB 4H0XA 3U0JA 4FMLA 4FXQA 4PKWA 1GXYA 1GXZA 2C8FE 1PWVA 1R4BA 4XSGB 4PKQA 1GY0A 3BUZA 5D1UA 3BW8A 2C89A 4H03A 4H0TA 1OG3A 1OJZA 4DV8A 2C8CA 4H0YA 1YQYA 1PWWA 2C8DA 2WN5A 2C8HA 5H04A 1OG4A 1JKYA 2C8GA 2GWLA 2A9KB 2J3ZA 1OG1A 2C8BX 1QS1A 4TR5A 1PWUA 2WN7A 1UZIA 4PKRA 4FK7A 4PKTA 4GY2A 2WN4A 1GZEA 1GIQA 5H03A 2J3VA 1GZFA 2C8AA 4ELNA 5DZQA 4XM8A 5GTTA 2A78B 1PWPA 2GWMA 4PKVA 1G24A 5D1TA 2WN8A 2J3XA 1PWQA 2C8EE 2BOVB 4PKSA 5D1SA 1OJQA 4GF1A 4XM6A 1QS2A 1R45A 2WN6A 4H0VA 4XSHB 4PKUA 4WF6A
chains in the Genus database with same CATH superfamily
1J7NA 1ZXVA 4XM7A 1GIRA 3NTSA 5BWMB 4H0XA 3U0JA 4FMLA 4FXQA 4PKWA 1GXYA 1GXZA 2C8FE 1PWVA 1R4BA 4XSGB 4PKQA 1GY0A 3BUZA 5D1UA 3BW8A 2C89A 4H03A 4H0TA 1OG3A 1OJZA 4DV8A 2C8CA 4H0YA 1YQYA 1PWWA 2C8DA 2WN5A 2C8HA 5H04A 1OG4A 1JKYA 2C8GA 2GWLA 2A9KB 2J3ZA 1OG1A 2C8BX 1QS1A 4TR5A 1PWUA 2WN7A 1UZIA 4PKRA 4FK7A 4PKTA 4GY2A 2WN4A 1GZEA 1GIQA 5H03A 2J3VA 1GZFA 2C8AA 4ELNA 5DZQA 4XM8A 5GTTA 2A78B 1PWPA 2GWMA 4PKVA 1G24A 5D1TA 2WN8A 2J3XA 1PWQA 2C8EE 2BOVB 4PKSA 5D1SA 1OJQA 4GF1A 4XM6A 1QS2A 1R45A 2WN6A 4H0VA 4XSHB 4PKUA 4WF6A
chains in the Genus database with same CATH topology
1J7NA 1ZXVA 4XM7A 1GIRA 3NTSA 5BWMB 4H0XA 3U0JA 4FMLA 4FXQA 4PKWA 1GXYA 1GXZA 2C8FE 1PWVA 1R4BA 4XSGB 4PKQA 1GY0A 3BUZA 5D1UA 3BW8A 2C89A 4H03A 4H0TA 1OG3A 1OJZA 4DV8A 2C8CA 4H0YA 1YQYA 1PWWA 2C8DA 2WN5A 2C8HA 5H04A 1OG4A 1JKYA 2C8GA 2GWLA 2A9KB 2J3ZA 1OG1A 2C8BX 1QS1A 4TR5A 1PWUA 2WN7A 1UZIA 4PKRA 4FK7A 4PKTA 4GY2A 2WN4A 1GZEA 1GIQA 5H03A 2J3VA 1GZFA 2C8AA 4ELNA 5DZQA 4XM8A 5GTTA 2A78B 1PWPA 2GWMA 4PKVA 1G24A 5D1TA 2WN8A 2J3XA 1PWQA 2C8EE 2BOVB 4PKSA 5D1SA 1OJQA 4GF1A 4XM6A 1QS2A 1R45A 2WN6A 4H0VA 4XSHB 4PKUA 4WF6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1J7N A;  1ZXV A;  4XM7 A;  1GIR A;  3NTS A;  5BWM B;  4H0X A;  3U0J A;  4FML A;  4FXQ A;  4PKW A;  1GXY A;  1GXZ A;  2C8F E;  1PWV A;  1R4B A;  4XSG B;  4PKQ A;  1GY0 A;  3BUZ A;  5D1U A;  3BW8 A;  2C89 A;  4H03 A;  4H0T A;  1OG3 A;  1OJZ A;  4DV8 A;  2C8C A;  4H0Y A;  1YQY A;  1PWW A;  2C8D A;  2WN5 A;  2C8H A;  5H04 A;  1OG4 A;  1JKY A;  2C8G A;  2GWL A;  2A9K B;  2J3Z A;  1OG1 A;  2C8B X;  1QS1 A;  4TR5 A;  1PWU A;  2WN7 A;  1UZI A;  4PKR A;  4FK7 A;  4PKT A;  4GY2 A;  2WN4 A;  1GZE A;  1GIQ A;  5H03 A;  2J3V A;  1GZF A;  2C8A A;  4ELN A;  5DZQ A;  4XM8 A;  5GTT A;  2A78 B;  1PWP A;  2GWM A;  4PKV A;  1G24 A;  5D1T A;  2WN8 A;  2J3X A;  1PWQ A;  2C8E E;  2BOV B;  4PKS A;  5D1S A;  1OJQ A;  4GF1 A;  4XM6 A;  1QS2 A;  1R45 A;  2WN6 A;  4H0V A;  4XSH B;  4PKU A;  4WF6 A; 
#chains in the Genus database with same CATH topology
 1J7N A;  1ZXV A;  4XM7 A;  1GIR A;  3NTS A;  5BWM B;  4H0X A;  3U0J A;  4FML A;  4FXQ A;  4PKW A;  1GXY A;  1GXZ A;  2C8F E;  1PWV A;  1R4B A;  4XSG B;  4PKQ A;  1GY0 A;  3BUZ A;  5D1U A;  3BW8 A;  2C89 A;  4H03 A;  4H0T A;  1OG3 A;  1OJZ A;  4DV8 A;  2C8C A;  4H0Y A;  1YQY A;  1PWW A;  2C8D A;  2WN5 A;  2C8H A;  5H04 A;  1OG4 A;  1JKY A;  2C8G A;  2GWL A;  2A9K B;  2J3Z A;  1OG1 A;  2C8B X;  1QS1 A;  4TR5 A;  1PWU A;  2WN7 A;  1UZI A;  4PKR A;  4FK7 A;  4PKT A;  4GY2 A;  2WN4 A;  1GZE A;  1GIQ A;  5H03 A;  2J3V A;  1GZF A;  2C8A A;  4ELN A;  5DZQ A;  4XM8 A;  5GTT A;  2A78 B;  1PWP A;  2GWM A;  4PKV A;  1G24 A;  5D1T A;  2WN8 A;  2J3X A;  1PWQ A;  2C8E E;  2BOV B;  4PKS A;  5D1S A;  1OJQ A;  4GF1 A;  4XM6 A;  1QS2 A;  1R45 A;  2WN6 A;  4H0V A;  4XSH B;  4PKU A;  4WF6 A; 
#chains in the Genus database with same CATH homology
 1J7N A;  1ZXV A;  4XM7 A;  1GIR A;  3NTS A;  5BWM B;  4H0X A;  3U0J A;  4FML A;  4FXQ A;  4PKW A;  1GXY A;  1GXZ A;  2C8F E;  1PWV A;  1R4B A;  4XSG B;  4PKQ A;  1GY0 A;  3BUZ A;  5D1U A;  3BW8 A;  2C89 A;  4H03 A;  4H0T A;  1OG3 A;  1OJZ A;  4DV8 A;  2C8C A;  4H0Y A;  1YQY A;  1PWW A;  2C8D A;  2WN5 A;  2C8H A;  5H04 A;  1OG4 A;  1JKY A;  2C8G A;  2GWL A;  2A9K B;  2J3Z A;  1OG1 A;  2C8B X;  1QS1 A;  4TR5 A;  1PWU A;  2WN7 A;  1UZI A;  4PKR A;  4FK7 A;  4PKT A;  4GY2 A;  2WN4 A;  1GZE A;  1GIQ A;  5H03 A;  2J3V A;  1GZF A;  2C8A A;  4ELN A;  5DZQ A;  4XM8 A;  5GTT A;  2A78 B;  1PWP A;  2GWM A;  4PKV A;  1G24 A;  5D1T A;  2WN8 A;  2J3X A;  1PWQ A;  2C8E E;  2BOV B;  4PKS A;  5D1S A;  1OJQ A;  4GF1 A;  4XM6 A;  1QS2 A;  1R45 A;  2WN6 A;  4H0V A;  4XSH B;  4PKU A;  4WF6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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