1G24A

The crystal structure of exoenzyme c3 from clostridium botulinum
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
211
structure length
211
Chain Sequence
AYSNTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords EXOENZYME C3
publication title Crystal structure and novel recognition motif of rho ADP-ribosylating C3 exoenzyme from Clostridium botulinum: structural insights for recognition specificity and catalysis.
pubmed doi rcsb
source organism Clostridium botulinum
molecule tags Transferase
total genus 67
structure length 211
sequence length 211
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2000-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1g24A00
4FK7A 4ELNA 4PKWA 1QS1A 1PWVA 2WN7A 2A78B 4XM8A 4PKSA 1OG4A 4H03A 4GY2A 2WN6A 2J3XA 1PWWA 1GZFA 2BOVB 5H04A 5BWMB 1GXYA 4FMLA 1GIQA 1OJZA 2C8EE 4XM6A 2GWLA 3BW8A 5H03A 1R4BA 2WN5A 2WN4A 4WF6A 1OG3A 4H0TA 4H0YA 4PKTA 1JKYA 2C8CA 4H0XA 5D1UA 1G24A 2C8HA 3U0JA 5D1SA 4PKQA 1UZIA 1GIRA 1J7NA 4PKUA 1YQYA 4XSHB 1PWUA 5D1TA 1ZXVA 3BUZA 3NTSA 5GTTA 2C89A 1GY0A 1GXZA 2J3ZA 1QS2A 4PKVA 1OG1A 4XSGB 1GZEA 4FXQA 2J3VA 2C8DA 4TR5A 2C8BX 4PKRA 2A9KB 2GWMA 1R45A 4XM7A 1PWPA 2C8AA 2C8GA 2WN8A 5DZQA 1PWQA 2C8FE 4H0VA 4GF1A 1OJQA 4DV8A
chains in the Genus database with same CATH superfamily
4FK7A 4ELNA 4PKWA 1QS1A 1PWVA 2WN7A 2A78B 4XM8A 4PKSA 1OG4A 4H03A 4GY2A 2WN6A 2J3XA 1PWWA 1GZFA 2BOVB 5H04A 5BWMB 1GXYA 4FMLA 1GIQA 1OJZA 2C8EE 4XM6A 2GWLA 3BW8A 5H03A 1R4BA 2WN5A 2WN4A 4WF6A 1OG3A 4H0TA 4H0YA 4PKTA 1JKYA 2C8CA 4H0XA 5D1UA 1G24A 2C8HA 3U0JA 5D1SA 4PKQA 1UZIA 1GIRA 1J7NA 4PKUA 1YQYA 4XSHB 1PWUA 5D1TA 1ZXVA 3BUZA 3NTSA 5GTTA 2C89A 1GY0A 1GXZA 2J3ZA 1QS2A 4PKVA 1OG1A 4XSGB 1GZEA 4FXQA 2J3VA 2C8DA 4TR5A 2C8BX 4PKRA 2A9KB 2GWMA 1R45A 4XM7A 1PWPA 2C8AA 2C8GA 2WN8A 5DZQA 1PWQA 2C8FE 4H0VA 4GF1A 1OJQA 4DV8A
chains in the Genus database with same CATH topology
4FK7A 4ELNA 4PKWA 1QS1A 1PWVA 2WN7A 2A78B 4XM8A 4PKSA 1OG4A 4H03A 4GY2A 2WN6A 2J3XA 1PWWA 1GZFA 2BOVB 5H04A 5BWMB 1GXYA 4FMLA 1GIQA 1OJZA 2C8EE 4XM6A 2GWLA 3BW8A 5H03A 1R4BA 2WN5A 2WN4A 4WF6A 1OG3A 4H0TA 4H0YA 4PKTA 1JKYA 2C8CA 4H0XA 5D1UA 1G24A 2C8HA 3U0JA 5D1SA 4PKQA 1UZIA 1GIRA 1J7NA 4PKUA 1YQYA 4XSHB 1PWUA 5D1TA 1ZXVA 3BUZA 3NTSA 5GTTA 2C89A 1GY0A 1GXZA 2J3ZA 1QS2A 4PKVA 1OG1A 4XSGB 1GZEA 4FXQA 2J3VA 2C8DA 4TR5A 2C8BX 4PKRA 2A9KB 2GWMA 1R45A 4XM7A 1PWPA 2C8AA 2C8GA 2WN8A 5DZQA 1PWQA 2C8FE 4H0VA 4GF1A 1OJQA 4DV8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FK7 A;  4ELN A;  4PKW A;  1QS1 A;  1PWV A;  2WN7 A;  2A78 B;  4XM8 A;  4PKS A;  1OG4 A;  4H03 A;  4GY2 A;  2WN6 A;  2J3X A;  1PWW A;  1GZF A;  2BOV B;  5H04 A;  5BWM B;  1GXY A;  4FML A;  1GIQ A;  1OJZ A;  2C8E E;  4XM6 A;  2GWL A;  3BW8 A;  5H03 A;  1R4B A;  2WN5 A;  2WN4 A;  4WF6 A;  1OG3 A;  4H0T A;  4H0Y A;  4PKT A;  1JKY A;  2C8C A;  4H0X A;  5D1U A;  1G24 A;  2C8H A;  3U0J A;  5D1S A;  4PKQ A;  1UZI A;  1GIR A;  1J7N A;  4PKU A;  1YQY A;  4XSH B;  1PWU A;  5D1T A;  1ZXV A;  3BUZ A;  3NTS A;  5GTT A;  2C89 A;  1GY0 A;  1GXZ A;  2J3Z A;  1QS2 A;  4PKV A;  1OG1 A;  4XSG B;  1GZE A;  4FXQ A;  2J3V A;  2C8D A;  4TR5 A;  2C8B X;  4PKR A;  2A9K B;  2GWM A;  1R45 A;  4XM7 A;  1PWP A;  2C8A A;  2C8G A;  2WN8 A;  5DZQ A;  1PWQ A;  2C8F E;  4H0V A;  4GF1 A;  1OJQ A;  4DV8 A; 
#chains in the Genus database with same CATH topology
 4FK7 A;  4ELN A;  4PKW A;  1QS1 A;  1PWV A;  2WN7 A;  2A78 B;  4XM8 A;  4PKS A;  1OG4 A;  4H03 A;  4GY2 A;  2WN6 A;  2J3X A;  1PWW A;  1GZF A;  2BOV B;  5H04 A;  5BWM B;  1GXY A;  4FML A;  1GIQ A;  1OJZ A;  2C8E E;  4XM6 A;  2GWL A;  3BW8 A;  5H03 A;  1R4B A;  2WN5 A;  2WN4 A;  4WF6 A;  1OG3 A;  4H0T A;  4H0Y A;  4PKT A;  1JKY A;  2C8C A;  4H0X A;  5D1U A;  1G24 A;  2C8H A;  3U0J A;  5D1S A;  4PKQ A;  1UZI A;  1GIR A;  1J7N A;  4PKU A;  1YQY A;  4XSH B;  1PWU A;  5D1T A;  1ZXV A;  3BUZ A;  3NTS A;  5GTT A;  2C89 A;  1GY0 A;  1GXZ A;  2J3Z A;  1QS2 A;  4PKV A;  1OG1 A;  4XSG B;  1GZE A;  4FXQ A;  2J3V A;  2C8D A;  4TR5 A;  2C8B X;  4PKR A;  2A9K B;  2GWM A;  1R45 A;  4XM7 A;  1PWP A;  2C8A A;  2C8G A;  2WN8 A;  5DZQ A;  1PWQ A;  2C8F E;  4H0V A;  4GF1 A;  1OJQ A;  4DV8 A; 
#chains in the Genus database with same CATH homology
 4FK7 A;  4ELN A;  4PKW A;  1QS1 A;  1PWV A;  2WN7 A;  2A78 B;  4XM8 A;  4PKS A;  1OG4 A;  4H03 A;  4GY2 A;  2WN6 A;  2J3X A;  1PWW A;  1GZF A;  2BOV B;  5H04 A;  5BWM B;  1GXY A;  4FML A;  1GIQ A;  1OJZ A;  2C8E E;  4XM6 A;  2GWL A;  3BW8 A;  5H03 A;  1R4B A;  2WN5 A;  2WN4 A;  4WF6 A;  1OG3 A;  4H0T A;  4H0Y A;  4PKT A;  1JKY A;  2C8C A;  4H0X A;  5D1U A;  1G24 A;  2C8H A;  3U0J A;  5D1S A;  4PKQ A;  1UZI A;  1GIR A;  1J7N A;  4PKU A;  1YQY A;  4XSH B;  1PWU A;  5D1T A;  1ZXV A;  3BUZ A;  3NTS A;  5GTT A;  2C89 A;  1GY0 A;  1GXZ A;  2J3Z A;  1QS2 A;  4PKV A;  1OG1 A;  4XSG B;  1GZE A;  4FXQ A;  2J3V A;  2C8D A;  4TR5 A;  2C8B X;  4PKR A;  2A9K B;  2GWM A;  1R45 A;  4XM7 A;  1PWP A;  2C8A A;  2C8G A;  2WN8 A;  5DZQ A;  1PWQ A;  2C8F E;  4H0V A;  4GF1 A;  1OJQ A;  4DV8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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