1G24A

The crystal structure of exoenzyme c3 from clostridium botulinum
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
211
structure length
211
Chain Sequence
AYSNTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords EXOENZYME C3
publication title Crystal structure and novel recognition motif of rho ADP-ribosylating C3 exoenzyme from Clostridium botulinum: structural insights for recognition specificity and catalysis.
pubmed doi rcsb
source organism Clostridium botulinum
molecule tags Transferase
total genus 67
structure length 211
sequence length 211
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2000-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1g24A00
4FK7A 2C8BX 1OJZA 1J7NA 5D1UA 4TR5A 4PKQA 3NTSA 4PKUA 5BWMB 2C89A 4PKRA 5H04A 4XM6A 1PWVA 1UZIA 4XM8A 1PWPA 5DZQA 1GIQA 2BOVB 4H0TA 4WF6A 1YQYA 2A78B 1QS2A 2WN5A 1GXZA 2A9KB 2WN4A 4XSGB 5D1SA 1PWUA 2WN7A 2C8CA 4DV8A 2C8AA 4FXQA 1JKYA 1R45A 2C8DA 1OG4A 2J3ZA 1GZEA 2WN6A 2GWLA 1OG3A 1G24A 2C8HA 4PKTA 1GXYA 1GY0A 2J3XA 3BUZA 1OJQA 3U0JA 2C8EE 1PWQA 2WN8A 2GWMA 2C8GA 3BW8A 4XM7A 4H0VA 4ELNA 5H03A 5GTTA 4GY2A 4PKSA 4PKVA 2C8FE 1R4BA 4H03A 5D1TA 1OG1A 4H0YA 1QS1A 4H0XA 4FMLA 1ZXVA 1GIRA 2J3VA 4PKWA 4XSHB 4GF1A 1GZFA 1PWWA
chains in the Genus database with same CATH superfamily
4FK7A 2C8BX 1OJZA 1J7NA 5D1UA 4TR5A 4PKQA 3NTSA 4PKUA 5BWMB 2C89A 4PKRA 5H04A 4XM6A 1PWVA 1UZIA 4XM8A 1PWPA 5DZQA 1GIQA 2BOVB 4H0TA 4WF6A 1YQYA 2A78B 1QS2A 2WN5A 1GXZA 2A9KB 2WN4A 4XSGB 5D1SA 1PWUA 2WN7A 2C8CA 4DV8A 2C8AA 4FXQA 1JKYA 1R45A 2C8DA 1OG4A 2J3ZA 1GZEA 2WN6A 2GWLA 1OG3A 1G24A 2C8HA 4PKTA 1GXYA 1GY0A 2J3XA 3BUZA 1OJQA 3U0JA 2C8EE 1PWQA 2WN8A 2GWMA 2C8GA 3BW8A 4XM7A 4H0VA 4ELNA 5H03A 5GTTA 4GY2A 4PKSA 4PKVA 2C8FE 1R4BA 4H03A 5D1TA 1OG1A 4H0YA 1QS1A 4H0XA 4FMLA 1ZXVA 1GIRA 2J3VA 4PKWA 4XSHB 4GF1A 1GZFA 1PWWA
chains in the Genus database with same CATH topology
4FK7A 2C8BX 1OJZA 1J7NA 5D1UA 4TR5A 4PKQA 3NTSA 4PKUA 5BWMB 2C89A 4PKRA 5H04A 4XM6A 1PWVA 1UZIA 4XM8A 1PWPA 5DZQA 1GIQA 2BOVB 4H0TA 4WF6A 1YQYA 2A78B 1QS2A 2WN5A 1GXZA 2A9KB 2WN4A 4XSGB 5D1SA 1PWUA 2WN7A 2C8CA 4DV8A 2C8AA 4FXQA 1JKYA 1R45A 2C8DA 1OG4A 2J3ZA 1GZEA 2WN6A 2GWLA 1OG3A 1G24A 2C8HA 4PKTA 1GXYA 1GY0A 2J3XA 3BUZA 1OJQA 3U0JA 2C8EE 1PWQA 2WN8A 2GWMA 2C8GA 3BW8A 4XM7A 4H0VA 4ELNA 5H03A 5GTTA 4GY2A 4PKSA 4PKVA 2C8FE 1R4BA 4H03A 5D1TA 1OG1A 4H0YA 1QS1A 4H0XA 4FMLA 1ZXVA 1GIRA 2J3VA 4PKWA 4XSHB 4GF1A 1GZFA 1PWWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FK7 A;  2C8B X;  1OJZ A;  1J7N A;  5D1U A;  4TR5 A;  4PKQ A;  3NTS A;  4PKU A;  5BWM B;  2C89 A;  4PKR A;  5H04 A;  4XM6 A;  1PWV A;  1UZI A;  4XM8 A;  1PWP A;  5DZQ A;  1GIQ A;  2BOV B;  4H0T A;  4WF6 A;  1YQY A;  2A78 B;  1QS2 A;  2WN5 A;  1GXZ A;  2A9K B;  2WN4 A;  4XSG B;  5D1S A;  1PWU A;  2WN7 A;  2C8C A;  4DV8 A;  2C8A A;  4FXQ A;  1JKY A;  1R45 A;  2C8D A;  1OG4 A;  2J3Z A;  1GZE A;  2WN6 A;  2GWL A;  1OG3 A;  1G24 A;  2C8H A;  4PKT A;  1GXY A;  1GY0 A;  2J3X A;  3BUZ A;  1OJQ A;  3U0J A;  2C8E E;  1PWQ A;  2WN8 A;  2GWM A;  2C8G A;  3BW8 A;  4XM7 A;  4H0V A;  4ELN A;  5H03 A;  5GTT A;  4GY2 A;  4PKS A;  4PKV A;  2C8F E;  1R4B A;  4H03 A;  5D1T A;  1OG1 A;  4H0Y A;  1QS1 A;  4H0X A;  4FML A;  1ZXV A;  1GIR A;  2J3V A;  4PKW A;  4XSH B;  4GF1 A;  1GZF A;  1PWW A; 
#chains in the Genus database with same CATH topology
 4FK7 A;  2C8B X;  1OJZ A;  1J7N A;  5D1U A;  4TR5 A;  4PKQ A;  3NTS A;  4PKU A;  5BWM B;  2C89 A;  4PKR A;  5H04 A;  4XM6 A;  1PWV A;  1UZI A;  4XM8 A;  1PWP A;  5DZQ A;  1GIQ A;  2BOV B;  4H0T A;  4WF6 A;  1YQY A;  2A78 B;  1QS2 A;  2WN5 A;  1GXZ A;  2A9K B;  2WN4 A;  4XSG B;  5D1S A;  1PWU A;  2WN7 A;  2C8C A;  4DV8 A;  2C8A A;  4FXQ A;  1JKY A;  1R45 A;  2C8D A;  1OG4 A;  2J3Z A;  1GZE A;  2WN6 A;  2GWL A;  1OG3 A;  1G24 A;  2C8H A;  4PKT A;  1GXY A;  1GY0 A;  2J3X A;  3BUZ A;  1OJQ A;  3U0J A;  2C8E E;  1PWQ A;  2WN8 A;  2GWM A;  2C8G A;  3BW8 A;  4XM7 A;  4H0V A;  4ELN A;  5H03 A;  5GTT A;  4GY2 A;  4PKS A;  4PKV A;  2C8F E;  1R4B A;  4H03 A;  5D1T A;  1OG1 A;  4H0Y A;  1QS1 A;  4H0X A;  4FML A;  1ZXV A;  1GIR A;  2J3V A;  4PKW A;  4XSH B;  4GF1 A;  1GZF A;  1PWW A; 
#chains in the Genus database with same CATH homology
 4FK7 A;  2C8B X;  1OJZ A;  1J7N A;  5D1U A;  4TR5 A;  4PKQ A;  3NTS A;  4PKU A;  5BWM B;  2C89 A;  4PKR A;  5H04 A;  4XM6 A;  1PWV A;  1UZI A;  4XM8 A;  1PWP A;  5DZQ A;  1GIQ A;  2BOV B;  4H0T A;  4WF6 A;  1YQY A;  2A78 B;  1QS2 A;  2WN5 A;  1GXZ A;  2A9K B;  2WN4 A;  4XSG B;  5D1S A;  1PWU A;  2WN7 A;  2C8C A;  4DV8 A;  2C8A A;  4FXQ A;  1JKY A;  1R45 A;  2C8D A;  1OG4 A;  2J3Z A;  1GZE A;  2WN6 A;  2GWL A;  1OG3 A;  1G24 A;  2C8H A;  4PKT A;  1GXY A;  1GY0 A;  2J3X A;  3BUZ A;  1OJQ A;  3U0J A;  2C8E E;  1PWQ A;  2WN8 A;  2GWM A;  2C8G A;  3BW8 A;  4XM7 A;  4H0V A;  4ELN A;  5H03 A;  5GTT A;  4GY2 A;  4PKS A;  4PKV A;  2C8F E;  1R4B A;  4H03 A;  5D1T A;  1OG1 A;  4H0Y A;  1QS1 A;  4H0X A;  4FML A;  1ZXV A;  1GIR A;  2J3V A;  4PKW A;  4XSH B;  4GF1 A;  1GZF A;  1PWW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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