1OJZA

The crystal structure of c3stau2 from s. aureus with nad
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
212
structure length
212
Chain Sequence
AETKNFTDLVEATKWGNSLIKSAKYSSKDKMAIYNYTKNSSPINTPLRSANGDVNKLSENIQEQVRQLDSTISKSVTPDSVYVYRLLNLDYLSSITGFTREDLHMLQQTNNGQYNEALVSKLNNLMNSRIYRENGYSSTQLVSGAALAGRPIELKLELPKGTKAAYIDSKELTAYPGQQEVLLPRGTEYAVGSVKLSDNKRKIIITAVVFKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords ADP-RIBOSYLTRANSFERASE
publication title The Crystal Structure of C3Stau2 from Staphylococcus Aureus and its Complex with Nad
pubmed doi rcsb
source organism Staphylococcus aureus
total genus 69
structure length 212
sequence length 212
ec nomenclature
pdb deposition date 2003-07-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1ojzA00
4FXQA 1OG4A 4PKSA 2GWLA 3BUZA 1OJZA 1GXZA 1ZXVA 2WN6A 4GY2A 2WN7A 4H0TA 5BWMB 1OJQA 2GWMA 4GF1A 4PKTA 2C8AA 2J3ZA 4H0YA 1PWUA 1OG1A 1PWPA 4FK7A 1R45A 1JKYA 2C8CA 5GTTA 2C8BX 2C89A 2C8GA 1PWVA 2A78B 2C8EE 4PKVA 1GIQA 4FMLA 1QS1A 2WN4A 4PKRA 4TR5A 2BOVB 1GXYA 4PKQA 4DV8A 4PKUA 2WN5A 1QS2A 4XM8A 2J3VA 1OG3A 5D1SA 1J7NA 4XSHB 3BW8A 5H04A 2C8DA 1UZIA 3U0JA 2WN8A 1G24A 1YQYA 4H0XA 1PWQA 5H03A 4XM7A 5D1TA 5D1UA 2J3XA 4H0VA 4H03A 1GIRA 1PWWA 3NTSA 5DZQA 1GY0A 2A9KB 4WF6A 4XSGB 1GZEA 2C8FE 2C8HA 1R4BA 1GZFA 4ELNA 4XM6A 4PKWA
chains in the Genus database with same CATH superfamily
4FXQA 1OG4A 4PKSA 2GWLA 3BUZA 1OJZA 1GXZA 1ZXVA 2WN6A 4GY2A 2WN7A 4H0TA 5BWMB 1OJQA 2GWMA 4GF1A 4PKTA 2C8AA 2J3ZA 4H0YA 1PWUA 1OG1A 1PWPA 4FK7A 1R45A 1JKYA 2C8CA 5GTTA 2C8BX 2C89A 2C8GA 1PWVA 2A78B 2C8EE 4PKVA 1GIQA 4FMLA 1QS1A 2WN4A 4PKRA 4TR5A 2BOVB 1GXYA 4PKQA 4DV8A 4PKUA 2WN5A 1QS2A 4XM8A 2J3VA 1OG3A 5D1SA 1J7NA 4XSHB 3BW8A 5H04A 2C8DA 1UZIA 3U0JA 2WN8A 1G24A 1YQYA 4H0XA 1PWQA 5H03A 4XM7A 5D1TA 5D1UA 2J3XA 4H0VA 4H03A 1GIRA 1PWWA 3NTSA 5DZQA 1GY0A 2A9KB 4WF6A 4XSGB 1GZEA 2C8FE 2C8HA 1R4BA 1GZFA 4ELNA 4XM6A 4PKWA
chains in the Genus database with same CATH topology
4FXQA 1OG4A 4PKSA 2GWLA 3BUZA 1OJZA 1GXZA 1ZXVA 2WN6A 4GY2A 2WN7A 4H0TA 5BWMB 1OJQA 2GWMA 4GF1A 4PKTA 2C8AA 2J3ZA 4H0YA 1PWUA 1OG1A 1PWPA 4FK7A 1R45A 1JKYA 2C8CA 5GTTA 2C8BX 2C89A 2C8GA 1PWVA 2A78B 2C8EE 4PKVA 1GIQA 4FMLA 1QS1A 2WN4A 4PKRA 4TR5A 2BOVB 1GXYA 4PKQA 4DV8A 4PKUA 2WN5A 1QS2A 4XM8A 2J3VA 1OG3A 5D1SA 1J7NA 4XSHB 3BW8A 5H04A 2C8DA 1UZIA 3U0JA 2WN8A 1G24A 1YQYA 4H0XA 1PWQA 5H03A 4XM7A 5D1TA 5D1UA 2J3XA 4H0VA 4H03A 1GIRA 1PWWA 3NTSA 5DZQA 1GY0A 2A9KB 4WF6A 4XSGB 1GZEA 2C8FE 2C8HA 1R4BA 1GZFA 4ELNA 4XM6A 4PKWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FXQ A;  1OG4 A;  4PKS A;  2GWL A;  3BUZ A;  1OJZ A;  1GXZ A;  1ZXV A;  2WN6 A;  4GY2 A;  2WN7 A;  4H0T A;  5BWM B;  1OJQ A;  2GWM A;  4GF1 A;  4PKT A;  2C8A A;  2J3Z A;  4H0Y A;  1PWU A;  1OG1 A;  1PWP A;  4FK7 A;  1R45 A;  1JKY A;  2C8C A;  5GTT A;  2C8B X;  2C89 A;  2C8G A;  1PWV A;  2A78 B;  2C8E E;  4PKV A;  1GIQ A;  4FML A;  1QS1 A;  2WN4 A;  4PKR A;  4TR5 A;  2BOV B;  1GXY A;  4PKQ A;  4DV8 A;  4PKU A;  2WN5 A;  1QS2 A;  4XM8 A;  2J3V A;  1OG3 A;  5D1S A;  1J7N A;  4XSH B;  3BW8 A;  5H04 A;  2C8D A;  1UZI A;  3U0J A;  2WN8 A;  1G24 A;  1YQY A;  4H0X A;  1PWQ A;  5H03 A;  4XM7 A;  5D1T A;  5D1U A;  2J3X A;  4H0V A;  4H03 A;  1GIR A;  1PWW A;  3NTS A;  5DZQ A;  1GY0 A;  2A9K B;  4WF6 A;  4XSG B;  1GZE A;  2C8F E;  2C8H A;  1R4B A;  1GZF A;  4ELN A;  4XM6 A;  4PKW A; 
#chains in the Genus database with same CATH topology
 4FXQ A;  1OG4 A;  4PKS A;  2GWL A;  3BUZ A;  1OJZ A;  1GXZ A;  1ZXV A;  2WN6 A;  4GY2 A;  2WN7 A;  4H0T A;  5BWM B;  1OJQ A;  2GWM A;  4GF1 A;  4PKT A;  2C8A A;  2J3Z A;  4H0Y A;  1PWU A;  1OG1 A;  1PWP A;  4FK7 A;  1R45 A;  1JKY A;  2C8C A;  5GTT A;  2C8B X;  2C89 A;  2C8G A;  1PWV A;  2A78 B;  2C8E E;  4PKV A;  1GIQ A;  4FML A;  1QS1 A;  2WN4 A;  4PKR A;  4TR5 A;  2BOV B;  1GXY A;  4PKQ A;  4DV8 A;  4PKU A;  2WN5 A;  1QS2 A;  4XM8 A;  2J3V A;  1OG3 A;  5D1S A;  1J7N A;  4XSH B;  3BW8 A;  5H04 A;  2C8D A;  1UZI A;  3U0J A;  2WN8 A;  1G24 A;  1YQY A;  4H0X A;  1PWQ A;  5H03 A;  4XM7 A;  5D1T A;  5D1U A;  2J3X A;  4H0V A;  4H03 A;  1GIR A;  1PWW A;  3NTS A;  5DZQ A;  1GY0 A;  2A9K B;  4WF6 A;  4XSG B;  1GZE A;  2C8F E;  2C8H A;  1R4B A;  1GZF A;  4ELN A;  4XM6 A;  4PKW A; 
#chains in the Genus database with same CATH homology
 4FXQ A;  1OG4 A;  4PKS A;  2GWL A;  3BUZ A;  1OJZ A;  1GXZ A;  1ZXV A;  2WN6 A;  4GY2 A;  2WN7 A;  4H0T A;  5BWM B;  1OJQ A;  2GWM A;  4GF1 A;  4PKT A;  2C8A A;  2J3Z A;  4H0Y A;  1PWU A;  1OG1 A;  1PWP A;  4FK7 A;  1R45 A;  1JKY A;  2C8C A;  5GTT A;  2C8B X;  2C89 A;  2C8G A;  1PWV A;  2A78 B;  2C8E E;  4PKV A;  1GIQ A;  4FML A;  1QS1 A;  2WN4 A;  4PKR A;  4TR5 A;  2BOV B;  1GXY A;  4PKQ A;  4DV8 A;  4PKU A;  2WN5 A;  1QS2 A;  4XM8 A;  2J3V A;  1OG3 A;  5D1S A;  1J7N A;  4XSH B;  3BW8 A;  5H04 A;  2C8D A;  1UZI A;  3U0J A;  2WN8 A;  1G24 A;  1YQY A;  4H0X A;  1PWQ A;  5H03 A;  4XM7 A;  5D1T A;  5D1U A;  2J3X A;  4H0V A;  4H03 A;  1GIR A;  1PWW A;  3NTS A;  5DZQ A;  1GY0 A;  2A9K B;  4WF6 A;  4XSG B;  1GZE A;  2C8F E;  2C8H A;  1R4B A;  1GZF A;  4ELN A;  4XM6 A;  4PKW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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