2WFNA

Filamin a actin binding domain
Total Genus 67

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
238
structure length
227
Chain Sequence
WKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMQTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRPK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (42-57)TI1 (66-69)3H1 (58-60)TI2 (67-70)TI4 (71-74)AH2 (75-85)AH4 (126-131)TIV1 (121-124)AH5 (134-150)TIV2 (150-153)AH7 (196-205)AH6 (168-179)EMPTYTIV3 (151-154)AH8 (221-236)TI8 (217-220)3H2 (190-192)TI6 (192-195)TI7 (210-213)TIV4 (206-209)3H3 (213-215)TIV5 (208-211)TI3 (69-72)AH3 (100-116)TVIII1 (94-97)TI5 (180-183)Updating...
connected with : NaN
molecule tags Contractile protein
source organism Homo sapiens
publication title Structure of the Human Filamin a Actin-Binding Domain
pubmed doi rcsb
molecule keywords FILAMIN-A
total genus 67
structure length 227
sequence length 238
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-04-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00307 CH Calponin homology (CH) domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.418.10 Mainly Alpha Orthogonal Bundle Actin-binding Protein, T-fimbrin; domain 1 Calponin-like domain 2wfnA01
1.10.418.10 Mainly Alpha Orthogonal Bundle Actin-binding Protein, T-fimbrin; domain 1 Calponin-like domain 2wfnA02
3HORA 2D85A 2VZDA 2JV9A 4EDNA 1WYOA 1DXXA 1VKAA 5BVRA 3JALM 5A38A 4Q59A 3HOCA 2EE7A 3F7PA 2YRNA 2WA5A 1WYQA 1WYMA 2L3GA 2EYNA 2D89A 2K2RA 3HOPA 2D87A 2WA6A 1QAGA 2R0OA 4EDMA 2WA7A 4EDLA 1H67A 3KMUB 1UEGA 2R8UA 2K3SA 2D88A 1AA2A 2RR8A 1P2XA 2D86A 1V5KA 2E9KA 3KMWB 4Q58A 1P5SA 1AOAA 2QJZA 1WYNA 2WFNA 5A36A 1PA7A 3JAKM 1MB8A 2QJXA 1WJOA 5A4BA 2EYIA 1UJOA 2VZIB 1SH6A 1WYLA 3I6XA 1TJTA 2VZCA 4Q57B 1RT8A 1PXYA 3CO1A 4TXIA 2DK9A 1WKUA 3FERA 1BKRA 1WYRA 3KY9A 3REPB 3JARM 2VZGB 5L0OA 5J8EA 1WIXA 5A37A 1SH5A 1BHDA 4B7LA 1WYPA 4TXKA
chains in the Genus database with same CATH superfamily
3HORA 2D85A 2VZDA 2JV9A 4EDNA 1WYOA 1DXXA 1VKAA 5BVRA 3JALM 4LVPA 5A38A 4Q59A 3HOCA 2EE7A 3F7PA 4DDPA 3EAYA 2YRNA 2WE6A 2WA5A 1WYQA 1WYMA 2L3GA 2EYNA 2D89A 2K2RA 3HOPA 2D87A 2WA6A 1QAGA 2R0OA 3VP7A 4EDMA 2WA7A 4EDLA 1H67A 3KMUB 1UEGA 2R8UA 4LVRA 2K3SA 2D88A 2VE7C 1AA2A 2RR8A 1P2XA 2D86A 5FMTA 1V5KA 2E9KA 3KMWB 4Q58A 1P5SA 1AOAA 2QJZA 1WYNA 2WFNA 5A36A 1EUVA 1PA7A 3JAKM 1MB8A 2QJXA 1WJOA 2VE7A 5A4BA 2EYIA 1UJOA 2VZIB 1SH6A 1WYLA 3I6XA 1TJTA 2VZCA 2IGPA 4Q57B 1RT8A 1PXYA 2EQOA 3CO1A 4TXIA 2WDTA 2DK9A 2HKPA 1WKUA 2HL9A 5FMUA 3FERA 1BKRA 1WYRA 3KY9A 3REPB 3JARM 2VZGB 5L0OA 5J8EA 2HL8A 1WIXA 5A37A 1SH5A 1BHDA 4B7LA 1WYPA 4TXKA
chains in the Genus database with same CATH topology
3HORA 2D85A 2VZDA 2JV9A 4EDNA 1WYOA 1DXXA 1VKAA 5BVRA 3JALM 5A38A 4Q59A 3HOCA 2EE7A 3F7PA 2YRNA 2WA5A 1WYQA 1WYMA 2L3GA 2EYNA 2D89A 2K2RA 3HOPA 2D87A 2WA6A 1QAGA 2R0OA 4EDMA 2WA7A 4EDLA 1H67A 3KMUB 1UEGA 2R8UA 2K3SA 2D88A 1AA2A 2RR8A 1P2XA 2D86A 1V5KA 2E9KA 3KMWB 4Q58A 1P5SA 1AOAA 2QJZA 1WYNA 2WFNA 5A36A 1PA7A 3JAKM 1MB8A 2QJXA 1WJOA 5A4BA 2EYIA 1UJOA 2VZIB 1SH6A 1WYLA 3I6XA 1TJTA 2VZCA 4Q57B 1RT8A 1PXYA 3CO1A 4TXIA 2DK9A 1WKUA 3FERA 1BKRA 1WYRA 3KY9A 3REPB 3JARM 2VZGB 5L0OA 5J8EA 1WIXA 5A37A 1SH5A 1BHDA 4B7LA 1WYPA 4TXKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOR A;  2D85 A;  2VZD A;  2JV9 A;  4EDN A;  1WYO A;  1DXX A;  1VKA A;  5BVR A;  3JAL M;  5A38 A;  4Q59 A;  3HOC A;  2EE7 A;  3F7P A;  2YRN A;  2WA5 A;  1WYQ A;  1WYM A;  2L3G A;  2EYN A;  2D89 A;  2K2R A;  3HOP A;  2D87 A;  2WA6 A;  1QAG A;  2R0O A;  4EDM A;  2WA7 A;  4EDL A;  1H67 A;  3KMU B;  1UEG A;  2R8U A;  2K3S A;  2D88 A;  1AA2 A;  2RR8 A;  1P2X A;  2D86 A;  1V5K A;  2E9K A;  3KMW B;  4Q58 A;  1P5S A;  1AOA A;  2QJZ A;  1WYN A;  2WFN A;  5A36 A;  1PA7 A;  3JAK M;  1MB8 A;  2QJX A;  1WJO A;  5A4B A;  2EYI A;  1UJO A;  2VZI B;  1SH6 A;  1WYL A;  3I6X A;  1TJT A;  2VZC A;  4Q57 B;  1RT8 A;  1PXY A;  3CO1 A;  4TXI A;  2DK9 A;  1WKU A;  3FER A;  1BKR A;  1WYR A;  3KY9 A;  3REP B;  3JAR M;  2VZG B;  5L0O A;  5J8E A;  1WIX A;  5A37 A;  1SH5 A;  1BHD A;  4B7L A;  1WYP A;  4TXK A; 
#chains in the Genus database with same CATH topology
 3HOR A;  2D85 A;  2VZD A;  2JV9 A;  4EDN A;  1WYO A;  1DXX A;  1VKA A;  5BVR A;  3JAL M;  4LVP A;  5A38 A;  4Q59 A;  3HOC A;  2EE7 A;  3F7P A;  4DDP A;  3EAY A;  2YRN A;  2WE6 A;  2WA5 A;  1WYQ A;  1WYM A;  2L3G A;  2EYN A;  2D89 A;  2K2R A;  3HOP A;  2D87 A;  2WA6 A;  1QAG A;  2R0O A;  3VP7 A;  4EDM A;  2WA7 A;  4EDL A;  1H67 A;  3KMU B;  1UEG A;  2R8U A;  4LVR A;  2K3S A;  2D88 A;  2VE7 C;  1AA2 A;  2RR8 A;  1P2X A;  2D86 A;  5FMT A;  1V5K A;  2E9K A;  3KMW B;  4Q58 A;  1P5S A;  1AOA A;  2QJZ A;  1WYN A;  2WFN A;  5A36 A;  1EUV A;  1PA7 A;  3JAK M;  1MB8 A;  2QJX A;  1WJO A;  2VE7 A;  5A4B A;  2EYI A;  1UJO A;  2VZI B;  1SH6 A;  1WYL A;  3I6X A;  1TJT A;  2VZC A;  2IGP A;  4Q57 B;  1RT8 A;  1PXY A;  2EQO A;  3CO1 A;  4TXI A;  2WDT A;  2DK9 A;  2HKP A;  1WKU A;  2HL9 A;  5FMU A;  3FER A;  1BKR A;  1WYR A;  3KY9 A;  3REP B;  3JAR M;  2VZG B;  5L0O A;  5J8E A;  2HL8 A;  1WIX A;  5A37 A;  1SH5 A;  1BHD A;  4B7L A;  1WYP A;  4TXK A; 
#chains in the Genus database with same CATH homology
 3HOR A;  2D85 A;  2VZD A;  2JV9 A;  4EDN A;  1WYO A;  1DXX A;  1VKA A;  5BVR A;  3JAL M;  5A38 A;  4Q59 A;  3HOC A;  2EE7 A;  3F7P A;  2YRN A;  2WA5 A;  1WYQ A;  1WYM A;  2L3G A;  2EYN A;  2D89 A;  2K2R A;  3HOP A;  2D87 A;  2WA6 A;  1QAG A;  2R0O A;  4EDM A;  2WA7 A;  4EDL A;  1H67 A;  3KMU B;  1UEG A;  2R8U A;  2K3S A;  2D88 A;  1AA2 A;  2RR8 A;  1P2X A;  2D86 A;  1V5K A;  2E9K A;  3KMW B;  4Q58 A;  1P5S A;  1AOA A;  2QJZ A;  1WYN A;  2WFN A;  5A36 A;  1PA7 A;  3JAK M;  1MB8 A;  2QJX A;  1WJO A;  5A4B A;  2EYI A;  1UJO A;  2VZI B;  1SH6 A;  1WYL A;  3I6X A;  1TJT A;  2VZC A;  4Q57 B;  1RT8 A;  1PXY A;  3CO1 A;  4TXI A;  2DK9 A;  1WKU A;  3FER A;  1BKR A;  1WYR A;  3KY9 A;  3REP B;  3JAR M;  2VZG B;  5L0O A;  5J8E A;  1WIX A;  5A37 A;  1SH5 A;  1BHD A;  4B7L A;  1WYP A;  4TXK A; 
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