The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
34
|
sequence length |
127
|
structure length |
127
|
Chain Sequence |
GENIVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQKVEKNSNQLLSQGDEITVGVGVESDILSLVIFINDKFKQCL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
The molecular basis of FHA domain:phosphopeptide binding specificity and implications for phospho-dependent signaling mechanisms.
pubmed doi rcsb |
| molecule tags |
Cell cycle
|
| source organism |
Saccharomyces cerevisiae
|
| molecule keywords |
PROTEIN KINASE RAD53
|
| total genus |
34
|
| structure length |
127
|
| sequence length |
127
|
| chains with identical sequence |
B
|
| ec nomenclature |
ec
2.7.12.1: Dual-specificity kinase. |
| pdb deposition date | 2000-11-06 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00498 | FHA | FHA domain |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Sandwich | Tumour Suppressor Smad4 | Tumour Suppressor Smad4 |
#chains in the Genus database with same CATH superfamily 2W3O A; 2XT9 B; 1FHQ A; 2A0T A; 2KB4 A; 3UNN A; 4A0E A; 3POA A; 3I0N A; 2JQI A; 1K3N A; 1G6G A; 2LC1 A; 1J4P A; 4EGX A; 1UJX A; 3VA4 A; 3ELV A; 1YJM A; 1K3J A; 1J4L A; 2JQJ A; 2BRF A; 3HUE A; 1YJ5 C; 4D9V A; 1GXC A; 1FHR A; 5E50 A; 2EH0 A; 3VPY A; 3UMZ A; 1J4O A; 3I6U A; 3UN0 A; 1WV3 A; 4H87 A; 1WLN A; 1K2M A; 2KB3 A; 3FM8 A; 1LGQ A; 2FEZ A; 2FF4 A; 2KFU A; 1K3Q A; 1J4Q A; 5DJO A; 1MZK A; 2PIE A; 2G1L A; 4QCJ A; 1K2N A; 3VA1 A; 3PO8 A; 4JON A; 3UOT A; 2CSW A; 3HUF A; 3HX1 A; 3ELS A; 4G2S A; 2JPE A; 1R21 A; 3I6W A; 2KKL A; 3I0M A; 1LGP A; 1G3G A; 3GQS A; 3UV0 A; 3KT9 A; 3OUN A; 1DMZ A; 2AFF A; 3UNM A; 2JQL A; 5A8I A; 1QU5 A; 1UHT A; 4EJQ A; 1J4K A; 2JKD A; 3MDB A; #chains in the Genus database with same CATH topology 3PFN A; 2W3O A; 3V80 A; 2XT9 B; 3V8R A; 4L02 A; 1FHQ A; 5EJI A; 3DSH A; 2A0T A; 2KB4 A; 3UNN A; 1U0R A; 2Q5F A; 4A0E A; 5JEL A; 3POA A; 3I0N A; 1Y3I A; 5DHU A; 1U7V B; 1KHX A; 2JQI A; 1K3N A; 1G6G A; 4KU0 D; 2LC1 A; 1J4P A; 4EGX A; 1Y3H A; 1UJX A; 5JEK A; 1YT5 A; 3VA4 A; 5JEM A; 2P1R A; 3ELV A; 3DIT A; 4DY6 A; 1YJM A; 3V7Y A; 1K3J A; 1J4L A; 1DEV A; 2I2F A; 2JQJ A; 3S40 A; 1QWT A; 2QVL A; 2BRF A; 3HUE A; 1MR1 A; 3VZD A; 5EJF A; 1ZOQ A; 5BVI A; 5DHP A; 1YJ5 C; 4D9V A; 1GXC A; 5C4V A; 1FHR A; 2I2A A; 5E50 A; 2AN1 A; 2EH0 A; 3VPY A; 3AFO A; 3UMZ A; 1J4O A; 3I6U A; 3UN0 A; 2I2B A; 3V8Q A; 2I29 A; 3V7W A; 5DHR A; 1WV3 A; 1YGS A; 4WER A; 3VZC A; 4H87 A; 1WLN A; 1K2M A; 2I2C A; 2KB3 A; 3FM8 A; 1LGQ A; 2FEZ A; 2FF4 A; 2KFU A; 1K3Q A; 4R9P A; 1J4Q A; 1U7V A; 5DJO A; 1MZK A; 1U7F B; 4HAO A; 5JEO A; 2I1W A; 1Z0S A; 2PIE A; 2G1L A; 4QCJ A; 5DHQ A; 1DD1 A; 1K2N A; 1KHU A; 3V7U A; 3T5P A; 3VA1 A; 4A4Y A; 3PO8 A; 1G88 A; 1Z0Z A; 4JIW D; 4JON A; 1SUW A; 3UOT A; 3GMJ A; 2CSW A; 3HUF A; 3HX1 A; 3ELS A; 2I2D A; 3VZB A; 4G2S A; 4WRR A; 2JPE A; 1R21 A; 3V8M A; 5EJG A; 3I6W A; 2KKL A; 3I0M A; 1J2F A; 3A77 A; 5JER A; 2QV7 A; 1LGP A; 5DHT A; 3GQS A; 1G3G A; 2BON A; 5JEJ A; 1MJS A; 2JGR A; 3UV0 A; 3KT9 A; 3V8P A; 3OUN A; 2AFF A; 1DMZ A; 1MK2 A; 3UNM A; 2JQL A; 3V8N A; 5A8I A; 5DHS A; 1QU5 A; 4JIV D; 5EJH A; 1Z0U A; 1U0T A; 1U7F A; 1UHT A; 4V24 A; 4EJQ A; 1J4K A; 2XXS A; 2JKD A; 3MDB A; #chains in the Genus database with same CATH homology 2W3O A; 2XT9 B; 4L02 A; 1FHQ A; 3DSH A; 2A0T A; 2KB4 A; 3UNN A; 4A0E A; 5JEL A; 3POA A; 3I0N A; 1U7V B; 1KHX A; 2JQI A; 1K3N A; 1G6G A; 4KU0 D; 2LC1 A; 1J4P A; 4EGX A; 1UJX A; 5JEK A; 5JEM A; 3VA4 A; 2P1R A; 3ELV A; 3DIT A; 1YJM A; 1K3J A; 1J4L A; 1DEV A; 2JQJ A; 3S40 A; 1QWT A; 2QVL A; 2BRF A; 3HUE A; 1MR1 A; 3VZD A; 1ZOQ A; 5BVI A; 1YJ5 C; 4D9V A; 1GXC A; 5C4V A; 1FHR A; 5E50 A; 2EH0 A; 3VPY A; 3UMZ A; 1J4O A; 3I6U A; 3UN0 A; 1WV3 A; 1YGS A; 4WER A; 3VZC A; 4H87 A; 1WLN A; 1K2M A; 2KB3 A; 3FM8 A; 1LGQ A; 2FEZ A; 2FF4 A; 2KFU A; 1K3Q A; 4R9P A; 1J4Q A; 1U7V A; 5DJO A; 1MZK A; 1U7F B; 5JEO A; 2PIE A; 2G1L A; 4QCJ A; 1DD1 A; 1K2N A; 1KHU A; 3T5P A; 3VA1 A; 4A4Y A; 3PO8 A; 1G88 A; 4JIW D; 4JON A; 3UOT A; 3GMJ A; 2CSW A; 3HUF A; 3HX1 A; 3ELS A; 3VZB A; 4G2S A; 4WRR A; 2JPE A; 1R21 A; 3I6W A; 2KKL A; 3I0M A; 1J2F A; 3A77 A; 5JER A; 2QV7 A; 1LGP A; 1G3G A; 3GQS A; 2BON A; 5JEJ A; 1MJS A; 2JGR A; 3UV0 A; 3KT9 A; 3OUN A; 2AFF A; 1DMZ A; 1MK2 A; 3UNM A; 2JQL A; 5A8I A; 1QU5 A; 4JIV D; 1U7F A; 1UHT A; 4V24 A; 4EJQ A; 1J4K A; 2XXS A; 2JKD A; 3MDB A;
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