1HKYA

Solution structure of a pan module from eimeria tenella
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
86
structure length
86
Chain Sequence
DYKDDDDKVKLTCYQNGVSFTGGKAISEAKAASSQACQELCEKDAKCRFFTLASGKCSLFADDAALRPTKSDGAVSGNKRCILLED
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution Structure of a Pan Module from the Apicomplexan Parasite Eimeria Tenella
pubmed doi rcsb
molecule tags Adhesin
source organism Eimeria tenella
molecule keywords MICRONEME PROTEIN 5 PRECURSOR
total genus 7
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2002-10-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.4.10 Alpha Beta 3-Layer(bba) Sandwich Hepatocyte Growth Factor Hepatocyte Growth Factor 1hkyA00
4Z0DA 3SRJA 1HKYA 3SP8A 5CS5A 5CS1A 2F83A 2Q8AA 4Z0FA 2QJ4A 3HMSA 2YILA 3HMTA 3HN4A 2LL3A 5CP9A 1I8NA 5EODA 5CT2A 1GP9A 1GMOA 3ZWZA 4APLA 5CT1A 1W8KA 2YIOA 4IUAA 2Y8RA 1YXEA 4R1BA 1Z40A 4DURA 5CT3A 4R19A 2J8JA 3SRIA 5CS9A 2Q8BA 5I25A 4Z0EA 3ZLEA 5CS3A 3HMRA 4A5TS 5EOKA 4Z09A 4R1AA 2Z8WA 2J8LA 1BHTA 1GMNA 5CSQA 2HGFA 2YIPA 4APMA 4UAOA 4UV6A 2Z8VA 3MKPA 2QJ2A 2K13X 1NK1A 1W81A 4R1CA 2LL4M 5COEA 2X2ZA
chains in the Genus database with same CATH superfamily
4Z0DA 3SRJA 1HKYA 3SP8A 5CS5A 4YIVA 5CS1A 4YIZA 2F83A 2Q8AA 4Z0FA 2QJ4A 3HMSA 2YILA 3HMTA 3HN4A 2LL3A 5CP9A 1I8NA 5EODA 5CT2A 1GP9A 1GMOA 3ZWZA 4APLA 5CT1A 1W8KA 2YIOA 4IUAA 2Y8RA 1YXEA 4R1BA 1Z40A 4DURA 5CT3A 4R19A 2J8JA 3SRIA 5CS9A 2Q8BA 5I25A 4Z0EA 3ZLEA 5CS3A 3HMRA 4A5TS 5EOKA 4Z09A 4R1AA 2Z8WA 2J8LA 1BHTA 1GMNA 5CSQA 2HGFA 2YIPA 4APMA 4UAOA 4UV6A 2Z8VA 3MKPA 2QJ2A 2KL5A 2K13X 1NK1A 1W81A 4R1CA 2LL4M 5COEA 2X2ZA
chains in the Genus database with same CATH topology
4Z0DA 3SRJA 1HKYA 3SP8A 5CS5A 4YIVA 5CS1A 4YIZA 2F83A 2Q8AA 4Z0FA 2QJ4A 3HMSA 2YILA 3HMTA 3HN4A 2LL3A 5CP9A 1I8NA 5EODA 5CT2A 1GP9A 1GMOA 3ZWZA 4APLA 5CT1A 1W8KA 2YIOA 4IUAA 2Y8RA 1YXEA 4R1BA 1Z40A 4DURA 5CT3A 4R19A 2J8JA 3SRIA 5CS9A 2Q8BA 5I25A 4Z0EA 3ZLEA 5CS3A 3HMRA 4A5TS 5EOKA 4Z09A 4R1AA 2Z8WA 2J8LA 1BHTA 1GMNA 5CSQA 2HGFA 2YIPA 4APMA 4UAOA 4UV6A 2Z8VA 3MKPA 2QJ2A 2KL5A 2K13X 1NK1A 1W81A 4R1CA 2LL4M 5COEA 2X2ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Z0D A;  3SRJ A;  1HKY A;  3SP8 A;  5CS5 A;  5CS1 A;  2F83 A;  2Q8A A;  4Z0F A;  2QJ4 A;  3HMS A;  2YIL A;  3HMT A;  3HN4 A;  2LL3 A;  5CP9 A;  1I8N A;  5EOD A;  5CT2 A;  1GP9 A;  1GMO A;  3ZWZ A;  4APL A;  5CT1 A;  1W8K A;  2YIO A;  4IUA A;  2Y8R A;  1YXE A;  4R1B A;  1Z40 A;  4DUR A;  5CT3 A;  4R19 A;  2J8J A;  3SRI A;  5CS9 A;  2Q8B A;  5I25 A;  4Z0E A;  3ZLE A;  5CS3 A;  3HMR A;  4A5T S;  5EOK A;  4Z09 A;  4R1A A;  2Z8W A;  2J8L A;  1BHT A;  1GMN A;  5CSQ A;  2HGF A;  2YIP A;  4APM A;  4UAO A;  4UV6 A;  2Z8V A;  3MKP A;  2QJ2 A;  2K13 X;  1NK1 A;  1W81 A;  4R1C A;  2LL4 M;  5COE A;  2X2Z A; 
#chains in the Genus database with same CATH topology
 4Z0D A;  3SRJ A;  1HKY A;  3SP8 A;  5CS5 A;  4YIV A;  5CS1 A;  4YIZ A;  2F83 A;  2Q8A A;  4Z0F A;  2QJ4 A;  3HMS A;  2YIL A;  3HMT A;  3HN4 A;  2LL3 A;  5CP9 A;  1I8N A;  5EOD A;  5CT2 A;  1GP9 A;  1GMO A;  3ZWZ A;  4APL A;  5CT1 A;  1W8K A;  2YIO A;  4IUA A;  2Y8R A;  1YXE A;  4R1B A;  1Z40 A;  4DUR A;  5CT3 A;  4R19 A;  2J8J A;  3SRI A;  5CS9 A;  2Q8B A;  5I25 A;  4Z0E A;  3ZLE A;  5CS3 A;  3HMR A;  4A5T S;  5EOK A;  4Z09 A;  4R1A A;  2Z8W A;  2J8L A;  1BHT A;  1GMN A;  5CSQ A;  2HGF A;  2YIP A;  4APM A;  4UAO A;  4UV6 A;  2Z8V A;  3MKP A;  2QJ2 A;  2KL5 A;  2K13 X;  1NK1 A;  1W81 A;  4R1C A;  2LL4 M;  5COE A;  2X2Z A; 
#chains in the Genus database with same CATH homology
 4Z0D A;  3SRJ A;  1HKY A;  3SP8 A;  5CS5 A;  4YIV A;  5CS1 A;  4YIZ A;  2F83 A;  2Q8A A;  4Z0F A;  2QJ4 A;  3HMS A;  2YIL A;  3HMT A;  3HN4 A;  2LL3 A;  5CP9 A;  1I8N A;  5EOD A;  5CT2 A;  1GP9 A;  1GMO A;  3ZWZ A;  4APL A;  5CT1 A;  1W8K A;  2YIO A;  4IUA A;  2Y8R A;  1YXE A;  4R1B A;  1Z40 A;  4DUR A;  5CT3 A;  4R19 A;  2J8J A;  3SRI A;  5CS9 A;  2Q8B A;  5I25 A;  4Z0E A;  3ZLE A;  5CS3 A;  3HMR A;  4A5T S;  5EOK A;  4Z09 A;  4R1A A;  2Z8W A;  2J8L A;  1BHT A;  1GMN A;  5CSQ A;  2HGF A;  2YIP A;  4APM A;  4UAO A;  4UV6 A;  2Z8V A;  3MKP A;  2QJ2 A;  2KL5 A;  2K13 X;  1NK1 A;  1W81 A;  4R1C A;  2LL4 M;  5COE A;  2X2Z A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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