The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
43
|
sequence length |
186
|
structure length |
186
|
Chain Sequence |
MHKLIIKYNKQLKMLNLRDGKTYTISEDERADITLKSLGEVIHLEQNNQGTWQANHTSINKVLVRKGDLDDITLQLYTEADYASFAYPSIQDTMTIGPNAYDDMVIQSLMNAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVEGIWLEVQADGLNVLSQNTVASSLIRL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Crystal structure analysis reveals a novel forkhead-associated domain of ESAT-6 secretion system C protein in Staphylococcus aureus.
pubmed doi rcsb |
| molecule tags |
Structural genomics, unknown function
|
| source organism |
Staphylococcus aureus subsp. aureus mu50
|
| molecule keywords |
similar to DNA segregation ATPase and related proteins
|
| total genus |
43
|
| structure length |
186
|
| sequence length |
186
|
| ec nomenclature | |
| pdb deposition date | 2004-12-10 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF12538 | FtsK_SpoIIIE_N | DNA transporter |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Sandwich | Tumour Suppressor Smad4 | Tumour Suppressor Smad4 | ||
| Mainly Beta | Sandwich | Tumour Suppressor Smad4 | Tumour Suppressor Smad4 |
#chains in the Genus database with same CATH superfamily 2W3O A; 2XT9 B; 1FHQ A; 2A0T A; 2KB4 A; 3UNN A; 4A0E A; 3POA A; 3I0N A; 2JQI A; 1K3N A; 1G6G A; 2LC1 A; 1J4P A; 4EGX A; 1UJX A; 3VA4 A; 3ELV A; 1YJM A; 1K3J A; 1J4L A; 2JQJ A; 2BRF A; 3HUE A; 1YJ5 C; 4D9V A; 1GXC A; 1FHR A; 5E50 A; 2EH0 A; 3VPY A; 3UMZ A; 1J4O A; 3I6U A; 3UN0 A; 1WV3 A; 4H87 A; 1WLN A; 1K2M A; 2KB3 A; 3FM8 A; 1LGQ A; 2FEZ A; 2FF4 A; 2KFU A; 1K3Q A; 1J4Q A; 5DJO A; 1MZK A; 2PIE A; 2G1L A; 4QCJ A; 1K2N A; 3VA1 A; 3PO8 A; 4JON A; 3UOT A; 2CSW A; 3HUF A; 3HX1 A; 3ELS A; 4G2S A; 2JPE A; 1R21 A; 3I6W A; 2KKL A; 3I0M A; 1LGP A; 1G3G A; 3GQS A; 3UV0 A; 3KT9 A; 3OUN A; 1DMZ A; 2AFF A; 3UNM A; 2JQL A; 5A8I A; 1QU5 A; 1UHT A; 4EJQ A; 1J4K A; 2JKD A; 3MDB A; #chains in the Genus database with same CATH topology 3PFN A; 2W3O A; 3V80 A; 2XT9 B; 3V8R A; 4L02 A; 1FHQ A; 5EJI A; 3DSH A; 2A0T A; 2KB4 A; 3UNN A; 1U0R A; 2Q5F A; 4A0E A; 5JEL A; 3POA A; 3I0N A; 1Y3I A; 5DHU A; 1U7V B; 1KHX A; 2JQI A; 1K3N A; 1G6G A; 4KU0 D; 2LC1 A; 1J4P A; 4EGX A; 1Y3H A; 1UJX A; 5JEK A; 1YT5 A; 3VA4 A; 5JEM A; 2P1R A; 3ELV A; 3DIT A; 4DY6 A; 1YJM A; 3V7Y A; 1K3J A; 1J4L A; 1DEV A; 2I2F A; 2JQJ A; 3S40 A; 1QWT A; 2QVL A; 2BRF A; 3HUE A; 1MR1 A; 3VZD A; 5EJF A; 1ZOQ A; 5BVI A; 5DHP A; 1YJ5 C; 4D9V A; 1GXC A; 5C4V A; 1FHR A; 2I2A A; 5E50 A; 2AN1 A; 2EH0 A; 3VPY A; 3AFO A; 3UMZ A; 1J4O A; 3I6U A; 3UN0 A; 2I2B A; 3V8Q A; 2I29 A; 3V7W A; 5DHR A; 1WV3 A; 1YGS A; 4WER A; 3VZC A; 4H87 A; 1WLN A; 1K2M A; 2I2C A; 2KB3 A; 3FM8 A; 1LGQ A; 2FEZ A; 2FF4 A; 2KFU A; 1K3Q A; 4R9P A; 1J4Q A; 1U7V A; 5DJO A; 1MZK A; 1U7F B; 4HAO A; 5JEO A; 2I1W A; 1Z0S A; 2PIE A; 2G1L A; 4QCJ A; 5DHQ A; 1DD1 A; 1K2N A; 1KHU A; 3V7U A; 3T5P A; 3VA1 A; 4A4Y A; 3PO8 A; 1G88 A; 1Z0Z A; 4JIW D; 4JON A; 1SUW A; 3UOT A; 3GMJ A; 2CSW A; 3HUF A; 3HX1 A; 3ELS A; 2I2D A; 3VZB A; 4G2S A; 4WRR A; 2JPE A; 1R21 A; 3V8M A; 5EJG A; 3I6W A; 2KKL A; 3I0M A; 1J2F A; 3A77 A; 5JER A; 2QV7 A; 1LGP A; 5DHT A; 3GQS A; 1G3G A; 2BON A; 5JEJ A; 1MJS A; 2JGR A; 3UV0 A; 3KT9 A; 3V8P A; 3OUN A; 2AFF A; 1DMZ A; 1MK2 A; 3UNM A; 2JQL A; 3V8N A; 5A8I A; 5DHS A; 1QU5 A; 4JIV D; 5EJH A; 1Z0U A; 1U0T A; 1U7F A; 1UHT A; 4V24 A; 4EJQ A; 1J4K A; 2XXS A; 2JKD A; 3MDB A; #chains in the Genus database with same CATH homology 2W3O A; 2XT9 B; 4L02 A; 1FHQ A; 3DSH A; 2A0T A; 2KB4 A; 3UNN A; 4A0E A; 5JEL A; 3POA A; 3I0N A; 1U7V B; 1KHX A; 2JQI A; 1K3N A; 1G6G A; 4KU0 D; 2LC1 A; 1J4P A; 4EGX A; 1UJX A; 5JEK A; 5JEM A; 3VA4 A; 2P1R A; 3ELV A; 3DIT A; 1YJM A; 1K3J A; 1J4L A; 1DEV A; 2JQJ A; 3S40 A; 1QWT A; 2QVL A; 2BRF A; 3HUE A; 1MR1 A; 3VZD A; 1ZOQ A; 5BVI A; 1YJ5 C; 4D9V A; 1GXC A; 5C4V A; 1FHR A; 5E50 A; 2EH0 A; 3VPY A; 3UMZ A; 1J4O A; 3I6U A; 3UN0 A; 1WV3 A; 1YGS A; 4WER A; 3VZC A; 4H87 A; 1WLN A; 1K2M A; 2KB3 A; 3FM8 A; 1LGQ A; 2FEZ A; 2FF4 A; 2KFU A; 1K3Q A; 4R9P A; 1J4Q A; 1U7V A; 5DJO A; 1MZK A; 1U7F B; 5JEO A; 2PIE A; 2G1L A; 4QCJ A; 1DD1 A; 1K2N A; 1KHU A; 3T5P A; 3VA1 A; 4A4Y A; 3PO8 A; 1G88 A; 4JIW D; 4JON A; 3UOT A; 3GMJ A; 2CSW A; 3HUF A; 3HX1 A; 3ELS A; 3VZB A; 4G2S A; 4WRR A; 2JPE A; 1R21 A; 3I6W A; 2KKL A; 3I0M A; 1J2F A; 3A77 A; 5JER A; 2QV7 A; 1LGP A; 1G3G A; 3GQS A; 2BON A; 5JEJ A; 1MJS A; 2JGR A; 3UV0 A; 3KT9 A; 3OUN A; 2AFF A; 1DMZ A; 1MK2 A; 3UNM A; 2JQL A; 5A8I A; 1QU5 A; 4JIV D; 1U7F A; 1UHT A; 4V24 A; 4EJQ A; 1J4K A; 2XXS A; 2JKD A; 3MDB A;
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