2KKLA

Solution nmr structure of fha domain of mb1858 from mycobacterium bovis. northeast structural genomics consortium target mbr243c (24-155).
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
140
structure length
140
Chain Sequence
VFRADFLSELDAPAQAGTESAVSGVEGLPPGLALLVVKRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGHKQGEDLEHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
source organism Mycobacterium bovis
publication title Solution NMR structure of FHA domain of Mb1858 from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR243C (24-155).
rcsb
molecule keywords Uncharacterized protein Mb1858
total genus 5
structure length 140
sequence length 140
ec nomenclature
pdb deposition date 2009-06-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00498 FHA FHA domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 Tumour Suppressor Smad4 2kklA00
4D9VA 5DJOA 1YJ5C 1J4OA 1FHQA 5E50A 3I6WA 2KFUA 3VPYA 3POAA 1G6GA 3MDBA 5A8IA 2KB3A 4JONA 3KT9A 1QU5A 3VA4A 2KKLA 3HX1A 2W3OA 2JPEA 2AFFA 4H87A 1UHTA 3UNMA 1FHRA 3OUNA 3PO8A 2LC1A 1J4QA 1J4PA 1G3GA 2XT9B 3HUEA 2BRFA 4EJQA 2KB4A 2G1LA 2A0TA 2JKDA 3I0NA 3UN0A 3UMZA 2PIEA 2JQJA 1K3NA 3ELSA 3GQSA 1WV3A 2FF4A 3VA1A 3I0MA 1K3JA 3HUFA 4A0EA 1DMZA 4G2SA 4EGXA 3I6UA 2JQIA 1MZKA 3UNNA 1K3QA 1WLNA 4QCJA 1UJXA 1LGQA 2FEZA 1R21A 3UV0A 1J4KA 3FM8A 2JQLA 1J4LA 2EH0A 3ELVA 1YJMA 3UOTA 1LGPA 1K2MA 1K2NA 2CSWA 1GXCA
chains in the Genus database with same CATH superfamily
4D9VA 5DJOA 2I2AA 1YJ5C 1J4OA 1Y3HA 3AFOA 1Z0UA 3DITA 4HAOA 5C4VA 1FHQA 4KU0D 2Q5FA 5E50A 1KHUA 3I6WA 1U7FB 5EJIA 3VZDA 2KFUA 5EJFA 3VPYA 3POAA 1G6GA 3MDBA 5DHRA 5A8IA 1MK2A 2KB3A 2JGRA 1YT5A 4JONA 2I2DA 3KT9A 1QU5A 3VA4A 1J2FA 3VZBA 1KHXA 1U0RA 1DEVA 2KKLA 3HX1A 2W3OA 2JPEA 1DD1A 2AFFA 2AN1A 3V8PA 2XXSA 5DHPA 3V7UA 4H87A 1UHTA 1YGSA 1U0TA 2I29A 3UNMA 1FHRA 3OUNA 3PO8A 5JEKA 3VZCA 2LC1A 4L02A 1J4QA 2I2BA 4JIVD 1MR1A 5BVIA 4V24A 1J4PA 1G3GA 2XT9B 4WRRA 5JERA 3HUEA 2I2CA 2BRFA 4EJQA 2KB4A 5DHSA 2G1LA 2A0TA 4R9PA 4DY6A 2JKDA 3I0NA 3UN0A 3UMZA 2PIEA 2JQJA 3GMJA 5DHUA 4A4YA 1K3NA 3V8RA 3ELSA 3GQSA 3S40A 1WV3A 5EJHA 5JEOA 1ZOQA 2FF4A 3VA1A 3I0MA 2P1RA 1K3JA 3PFNA 3HUFA 1QWTA 1U7VA 1Z0ZA 2BONA 3A77A 4A0EA 1U7FA 1MJSA 1DMZA 3V8NA 3DSHA 4G2SA 2QV7A 4EGXA 1Z0SA 3I6UA 2JQIA 1G88A 4JIWD 5DHQA 1MZKA 2I2FA 3UNNA 1U7VB 3V80A 1K3QA 5EJGA 1WLNA 4QCJA 1UJXA 1LGQA 1SUWA 1R21A 2FEZA 1Y3IA 3UV0A 3V7YA 1J4KA 4WERA 3V8QA 3V8MA 2I1WA 5JELA 3FM8A 2JQLA 1J4LA 2EH0A 3ELVA 1YJMA 3UOTA 2QVLA 1LGPA 1K2MA 5JEMA 3V7WA 5JEJA 1K2NA 5DHTA 3T5PA 2CSWA 1GXCA
chains in the Genus database with same CATH topology
4D9VA 5DJOA 3DITA 1YJ5C 1J4OA 5C4VA 1FHQA 4KU0D 5E50A 1KHUA 3I6WA 1U7FB 3VZDA 2KFUA 3VPYA 3POAA 1G6GA 3MDBA 5A8IA 1MK2A 2KB3A 2JGRA 4JONA 3KT9A 1QU5A 3VA4A 1J2FA 3VZBA 1KHXA 1DEVA 2KKLA 3HX1A 2W3OA 2JPEA 1DD1A 2AFFA 2XXSA 4H87A 1UHTA 1YGSA 3UNMA 1FHRA 3OUNA 3PO8A 5JEKA 3VZCA 2LC1A 4L02A 1J4QA 4JIVD 1MR1A 5BVIA 4V24A 1J4PA 1G3GA 2XT9B 4WRRA 5JERA 3HUEA 2BRFA 4EJQA 2KB4A 2G1LA 2A0TA 4R9PA 2JKDA 3I0NA 3UN0A 3UMZA 2PIEA 2JQJA 3GMJA 1K3NA 4A4YA 3ELSA 3GQSA 3S40A 1WV3A 5JEOA 1ZOQA 2FF4A 3VA1A 3I0MA 2P1RA 1K3JA 3HUFA 1QWTA 1U7VA 2BONA 3A77A 4A0EA 1U7FA 1MJSA 1DMZA 3DSHA 4G2SA 2QV7A 4EGXA 3I6UA 2JQIA 1G88A 4JIWD 1MZKA 3UNNA 1U7VB 1K3QA 1WLNA 4QCJA 1UJXA 1LGQA 2FEZA 1R21A 3UV0A 1J4KA 4WERA 5JELA 3FM8A 2JQLA 1J4LA 2EH0A 3ELVA 1YJMA 3UOTA 2QVLA 1LGPA 1K2MA 5JEMA 5JEJA 1K2NA 3T5PA 2CSWA 1GXCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4D9V A;  5DJO A;  1YJ5 C;  1J4O A;  1FHQ A;  5E50 A;  3I6W A;  2KFU A;  3VPY A;  3POA A;  1G6G A;  3MDB A;  5A8I A;  2KB3 A;  4JON A;  3KT9 A;  1QU5 A;  3VA4 A;  2KKL A;  3HX1 A;  2W3O A;  2JPE A;  2AFF A;  4H87 A;  1UHT A;  3UNM A;  1FHR A;  3OUN A;  3PO8 A;  2LC1 A;  1J4Q A;  1J4P A;  1G3G A;  2XT9 B;  3HUE A;  2BRF A;  4EJQ A;  2KB4 A;  2G1L A;  2A0T A;  2JKD A;  3I0N A;  3UN0 A;  3UMZ A;  2PIE A;  2JQJ A;  1K3N A;  3ELS A;  3GQS A;  1WV3 A;  2FF4 A;  3VA1 A;  3I0M A;  1K3J A;  3HUF A;  4A0E A;  1DMZ A;  4G2S A;  4EGX A;  3I6U A;  2JQI A;  1MZK A;  3UNN A;  1K3Q A;  1WLN A;  4QCJ A;  1UJX A;  1LGQ A;  2FEZ A;  1R21 A;  3UV0 A;  1J4K A;  3FM8 A;  2JQL A;  1J4L A;  2EH0 A;  3ELV A;  1YJM A;  3UOT A;  1LGP A;  1K2M A;  1K2N A;  2CSW A;  1GXC A; 
#chains in the Genus database with same CATH topology
 4D9V A;  5DJO A;  2I2A A;  1YJ5 C;  1J4O A;  1Y3H A;  3AFO A;  1Z0U A;  3DIT A;  4HAO A;  5C4V A;  1FHQ A;  4KU0 D;  2Q5F A;  5E50 A;  1KHU A;  3I6W A;  1U7F B;  5EJI A;  3VZD A;  2KFU A;  5EJF A;  3VPY A;  3POA A;  1G6G A;  3MDB A;  5DHR A;  5A8I A;  1MK2 A;  2KB3 A;  2JGR A;  1YT5 A;  4JON A;  2I2D A;  3KT9 A;  1QU5 A;  3VA4 A;  1J2F A;  3VZB A;  1KHX A;  1U0R A;  1DEV A;  2KKL A;  3HX1 A;  2W3O A;  2JPE A;  1DD1 A;  2AFF A;  2AN1 A;  3V8P A;  2XXS A;  5DHP A;  3V7U A;  4H87 A;  1UHT A;  1YGS A;  1U0T A;  2I29 A;  3UNM A;  1FHR A;  3OUN A;  3PO8 A;  5JEK A;  3VZC A;  2LC1 A;  4L02 A;  1J4Q A;  2I2B A;  4JIV D;  1MR1 A;  5BVI A;  4V24 A;  1J4P A;  1G3G A;  2XT9 B;  4WRR A;  5JER A;  3HUE A;  2I2C A;  2BRF A;  4EJQ A;  2KB4 A;  5DHS A;  2G1L A;  2A0T A;  4R9P A;  4DY6 A;  2JKD A;  3I0N A;  3UN0 A;  3UMZ A;  2PIE A;  2JQJ A;  3GMJ A;  5DHU A;  4A4Y A;  1K3N A;  3V8R A;  3ELS A;  3GQS A;  3S40 A;  1WV3 A;  5EJH A;  5JEO A;  1ZOQ A;  2FF4 A;  3VA1 A;  3I0M A;  2P1R A;  1K3J A;  3PFN A;  3HUF A;  1QWT A;  1U7V A;  1Z0Z A;  2BON A;  3A77 A;  4A0E A;  1U7F A;  1MJS A;  1DMZ A;  3V8N A;  3DSH A;  4G2S A;  2QV7 A;  4EGX A;  1Z0S A;  3I6U A;  2JQI A;  1G88 A;  4JIW D;  5DHQ A;  1MZK A;  2I2F A;  3UNN A;  1U7V B;  3V80 A;  1K3Q A;  5EJG A;  1WLN A;  4QCJ A;  1UJX A;  1LGQ A;  1SUW A;  1R21 A;  2FEZ A;  1Y3I A;  3UV0 A;  3V7Y A;  1J4K A;  4WER A;  3V8Q A;  3V8M A;  2I1W A;  5JEL A;  3FM8 A;  2JQL A;  1J4L A;  2EH0 A;  3ELV A;  1YJM A;  3UOT A;  2QVL A;  1LGP A;  1K2M A;  5JEM A;  3V7W A;  5JEJ A;  1K2N A;  5DHT A;  3T5P A;  2CSW A;  1GXC A; 
#chains in the Genus database with same CATH homology
 4D9V A;  5DJO A;  3DIT A;  1YJ5 C;  1J4O A;  5C4V A;  1FHQ A;  4KU0 D;  5E50 A;  1KHU A;  3I6W A;  1U7F B;  3VZD A;  2KFU A;  3VPY A;  3POA A;  1G6G A;  3MDB A;  5A8I A;  1MK2 A;  2KB3 A;  2JGR A;  4JON A;  3KT9 A;  1QU5 A;  3VA4 A;  1J2F A;  3VZB A;  1KHX A;  1DEV A;  2KKL A;  3HX1 A;  2W3O A;  2JPE A;  1DD1 A;  2AFF A;  2XXS A;  4H87 A;  1UHT A;  1YGS A;  3UNM A;  1FHR A;  3OUN A;  3PO8 A;  5JEK A;  3VZC A;  2LC1 A;  4L02 A;  1J4Q A;  4JIV D;  1MR1 A;  5BVI A;  4V24 A;  1J4P A;  1G3G A;  2XT9 B;  4WRR A;  5JER A;  3HUE A;  2BRF A;  4EJQ A;  2KB4 A;  2G1L A;  2A0T A;  4R9P A;  2JKD A;  3I0N A;  3UN0 A;  3UMZ A;  2PIE A;  2JQJ A;  3GMJ A;  1K3N A;  4A4Y A;  3ELS A;  3GQS A;  3S40 A;  1WV3 A;  5JEO A;  1ZOQ A;  2FF4 A;  3VA1 A;  3I0M A;  2P1R A;  1K3J A;  3HUF A;  1QWT A;  1U7V A;  2BON A;  3A77 A;  4A0E A;  1U7F A;  1MJS A;  1DMZ A;  3DSH A;  4G2S A;  2QV7 A;  4EGX A;  3I6U A;  2JQI A;  1G88 A;  4JIW D;  1MZK A;  3UNN A;  1U7V B;  1K3Q A;  1WLN A;  4QCJ A;  1UJX A;  1LGQ A;  2FEZ A;  1R21 A;  3UV0 A;  1J4K A;  4WER A;  5JEL A;  3FM8 A;  2JQL A;  1J4L A;  2EH0 A;  3ELV A;  1YJM A;  3UOT A;  2QVL A;  1LGP A;  1K2M A;  5JEM A;  5JEJ A;  1K2N A;  3T5P A;  2CSW A;  1GXC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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