2OP6A

Peptide-binding domain of heat shock 70 kda protein d precursor from c.elegans
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
150
structure length
150
Chain Sequence
ADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Peptide binding protein
molecule keywords Heat shock 70 kDa protein D
publication title X-ray structure of peptide-binding domain of Heat shock 70 kDa protein D precursor from C.elegans
rcsb
source organism Caenorhabditis elegans
total genus 38
structure length 150
sequence length 150
ec nomenclature ec 3.6.4.10: Non-chaperonin molecular chaperone ATPase.
pdb deposition date 2007-01-26
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.34.10 Mainly Beta Sandwich Substrate Binding Domain Of DNAk; Chain A, domain 1 Substrate Binding Domain Of DNAk; Chain A, domain 1 2op6A00
2OP6A 3N8EA 4JWCA 4R5IA 3DOBA 1CKRA 3DQGA 2QXLA 4R5JA 3QNJA 1U00A 4EZWA 4F01A 4EZUA 4EZQA 4JNFA 4EZRA 5E84A 4WV7A 3DPPA 1DKYA 1DKZA 4JN4A 3DPOA 4R5LA 1Q5LA 5TKYA 4R5KA 4EZOA 4EZXA 2KHOA 1BPRA 3H0XA 4HYBA 4EZSA 1YUWA 4JWEA 4WV5A 4FL9A 4JWDA 7HSCA 2V7YA 4EZPA 3C7NB 3D2EA 3D2FA 3DPQA 4EZTA 4JNEA 4JWIA 4F00A 4PO2A 1DG4A 4HY9A 4E81A 4R5GA 4EZVA 4EZNA 1DKXA 2BPRA 3C7NA 4B9QA 4EZZA 4EZYA
chains in the Genus database with same CATH superfamily
2OP6A 3N8EA 4JWCA 4R5IA 3DOBA 1CKRA 3DQGA 2QXLA 4R5JA 3QNJA 1U00A 4EZWA 4F01A 4EZUA 4EZQA 4JNFA 3SBTB 4EZRA 4ILGA 5E84A 4WV7A 3DPPA 1DKYA 1DKZA 4I43A 3DPOA 4JN4A 1Q5LA 4R5LA 4ILIA 4R5KA 5TKYA 4EZOA 2KHOA 1BPRA 3H0XA 4HYBA 4EZSA 1YUWA 4JWEA 4WV5A 4FL9A 4JWDA 7HSCA 2V7YA 3ZEFA 4EZPA 4ILHB 3C7NB 4MQDA 3D2EA 3D2FA 3DPQA 4EZTA 4JNEA 4JWIA 3SBSA 4F00A 4PO2A 1DG4A 4HY9A 4E81A 4R5GA 4EZVA 4EZNA 1DKXA 4EZXA 2BPRA 3C7NA 4B9QA 4EZZA 4EZYA
chains in the Genus database with same CATH topology
2OP6A 3N8EA 4JWCA 4R5IA 3DOBA 1CKRA 3DQGA 2QXLA 4R5JA 3QNJA 1U00A 4EZWA 4F01A 4EZUA 4EZQA 4JNFA 3SBTB 4EZRA 4ILGA 5E84A 4WV7A 3DPPA 1DKYA 1DKZA 4I43A 3DPOA 4JN4A 1Q5LA 4R5LA 4ILIA 4R5KA 5TKYA 4EZOA 2KHOA 1BPRA 3H0XA 4HYBA 4EZSA 1YUWA 4JWEA 4WV5A 4FL9A 4JWDA 7HSCA 2V7YA 3ZEFA 4EZPA 4ILHB 3C7NB 4MQDA 3D2EA 3D2FA 3DPQA 4EZTA 4JNEA 4JWIA 3SBSA 4F00A 4PO2A 1DG4A 4HY9A 4E81A 4R5GA 4EZVA 4EZNA 1DKXA 4EZXA 2BPRA 3C7NA 4B9QA 4EZZA 4EZYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2OP6 A;  3N8E A;  4JWC A;  4R5I A;  3DOB A;  1CKR A;  3DQG A;  2QXL A;  4R5J A;  3QNJ A;  1U00 A;  4EZW A;  4F01 A;  4EZU A;  4EZQ A;  4JNF A;  4EZR A;  5E84 A;  4WV7 A;  3DPP A;  1DKY A;  1DKZ A;  4JN4 A;  3DPO A;  4R5L A;  1Q5L A;  5TKY A;  4R5K A;  4EZO A;  4EZX A;  2KHO A;  1BPR A;  3H0X A;  4HYB A;  4EZS A;  1YUW A;  4JWE A;  4WV5 A;  4FL9 A;  4JWD A;  7HSC A;  2V7Y A;  4EZP A;  3C7N B;  3D2E A;  3D2F A;  3DPQ A;  4EZT A;  4JNE A;  4JWI A;  4F00 A;  4PO2 A;  1DG4 A;  4HY9 A;  4E81 A;  4R5G A;  4EZV A;  4EZN A;  1DKX A;  2BPR A;  3C7N A;  4B9Q A;  4EZZ A;  4EZY A; 
#chains in the Genus database with same CATH topology
 2OP6 A;  3N8E A;  4JWC A;  4R5I A;  3DOB A;  1CKR A;  3DQG A;  2QXL A;  4R5J A;  3QNJ A;  1U00 A;  4EZW A;  4F01 A;  4EZU A;  4EZQ A;  4JNF A;  3SBT B;  4EZR A;  4ILG A;  5E84 A;  4WV7 A;  3DPP A;  1DKY A;  1DKZ A;  4I43 A;  3DPO A;  4JN4 A;  1Q5L A;  4R5L A;  4ILI A;  4R5K A;  5TKY A;  4EZO A;  2KHO A;  1BPR A;  3H0X A;  4HYB A;  4EZS A;  1YUW A;  4JWE A;  4WV5 A;  4FL9 A;  4JWD A;  7HSC A;  2V7Y A;  3ZEF A;  4EZP A;  4ILH B;  3C7N B;  4MQD A;  3D2E A;  3D2F A;  3DPQ A;  4EZT A;  4JNE A;  4JWI A;  3SBS A;  4F00 A;  4PO2 A;  1DG4 A;  4HY9 A;  4E81 A;  4R5G A;  4EZV A;  4EZN A;  1DKX A;  4EZX A;  2BPR A;  3C7N A;  4B9Q A;  4EZZ A;  4EZY A; 
#chains in the Genus database with same CATH homology
 2OP6 A;  3N8E A;  4JWC A;  4R5I A;  3DOB A;  1CKR A;  3DQG A;  2QXL A;  4R5J A;  3QNJ A;  1U00 A;  4EZW A;  4F01 A;  4EZU A;  4EZQ A;  4JNF A;  3SBT B;  4EZR A;  4ILG A;  5E84 A;  4WV7 A;  3DPP A;  1DKY A;  1DKZ A;  4I43 A;  3DPO A;  4JN4 A;  1Q5L A;  4R5L A;  4ILI A;  4R5K A;  5TKY A;  4EZO A;  2KHO A;  1BPR A;  3H0X A;  4HYB A;  4EZS A;  1YUW A;  4JWE A;  4WV5 A;  4FL9 A;  4JWD A;  7HSC A;  2V7Y A;  3ZEF A;  4EZP A;  4ILH B;  3C7N B;  4MQD A;  3D2E A;  3D2F A;  3DPQ A;  4EZT A;  4JNE A;  4JWI A;  3SBS A;  4F00 A;  4PO2 A;  1DG4 A;  4HY9 A;  4E81 A;  4R5G A;  4EZV A;  4EZN A;  1DKX A;  4EZX A;  2BPR A;  3C7N A;  4B9Q A;  4EZZ A;  4EZY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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