1U00A

Hsca substrate binding domain complexed with the iscu recognition peptide elppvkihc
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
227
structure length
227
Chain Sequence
MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Chaperone
molecule keywords Chaperone protein hscA
publication title Crystal Structure of the Molecular Chaperone HscA Substrate Binding Domain Complexed with the IscU Recognition Peptide ELPPVKIHC.
pubmed doi rcsb
source organism Escherichia coli
total genus 71
structure length 227
sequence length 227
ec nomenclature
pdb deposition date 2004-07-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.10 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 1u00A02
2.60.34.10 Mainly Beta Sandwich Substrate Binding Domain Of DNAk; Chain A, domain 1 Substrate Binding Domain Of DNAk; Chain A, domain 1 1u00A01
4PO2A 1BPRA 4R5KA 4EZYA 4EZPA 4FL9A 3DPQA 4R5GA 3DQGA 4E81A 3DOBA 4R5JA 4HYBA 1CKRA 3L3OM 2KHOA 3D2FA 3DPPA 4JWEA 2BPRA 3H0XA 2WINM 4F01A 4F00A 1DKXA 5TKYA 2OP6A 3D2EA 4JNFA 4EZUA 4EZRA 2QXLA 1DKZA 4B9QA 4EZZA 1DKYA 3QNJA 2QFFA 4H6IA 4JWDA 4EZWA 4WV5A 4JWCA 3N8EA 4JNEA 4R5LA 4EZSA 1YUWA 4EZXA 7HSCA 1U00A 3T4AG 3DPOA 4EZOA 4H6HA 4HY9A 4JN4A 3T47A 3T49A 4EZQA 4EZNA 3T46A 2V7YA 5E84A 3C7NB 4WV7A 1Q5LA 4JWIA 4R5IA 3T48A 3OHXM 1DG4A 4EZVA 4EZTA 3C7NA
chains in the Genus database with same CATH superfamily
3LMFA 3DOBA 1GNTA 1OA0A 3O3MB 1Y2OA 3D2EA 4EZUA 1LQ7A 3ERCC 3DX2A 3CV5A 4JNEA 7HSCA 2GA9D 2F1AA 2YIVX 3QWEA 4EZVA 3KAWA 2D4CA 3FD9A 4FL9A 1SU6A 2EX3B 2NCZA 4AZCB 2OP6A 4B9QA 1O7DC 2RAKA 3N8EA 2YLLA 2C08A 3T4AG 4G6QA 3ABHA 3EJQA 4WPCA 1DG4A 4R5IA 3CZNA 3DPQA 3F7WA 3SBSA 4F01A 4IM2A 4ILGA 2ND1A 4EZWA 1YUWA 3RPMA 3T49A 5KBPA 3SYVA 3BVWA 3T48A 3EJUA 3OHXM 3BVTA 2PY6A 4EZYA 4I1QA 3CZSA 2GF4A 2YKTA 2WINM 4F00A 2Z8YA 3BUDA 4NPHA 4EZSA 3QA8A 4E3CA 3CAZA 3OK8A 5FLEX 3CKDA 4R5KA 4AZ5A 4AZ7A 3L3OM 5TKYA 2YI9A 3BUBA 4NSWA 2QFFA 2ALWA 4R5LA 3G9GA 4H8SA 1PS3A 4H6HA 4HY9A 2F7PA 1YWMA 4HR1B 2Z0VA 3I2WA 4R5JA 4IWPA 1DKXA 3A98A 1R33A 2Z0OA 2X3WA 1WDZA 3SOGA 4JWDA 3LLLA 2OBMA 3KAVA 2YL8A 4FZPA 1MJGA 2EFLA 3DDFA 3EJSA 2Z0NA 2OW7A 5E84A 4JWIA 3ER8C 5C5BB 3Q84A 4AKVA 1BPRA 3B51X 2LM0A 3EJPA 3BVVA 4KIKB 2F7RA 3PLTA 3I39X 3ER9B 5FIGA 1DKZA 4AZCA 3QNJA 4ILHB 1UPXA 3DX1A 4FM3A 3DX4A 2EFKA 1HWWA 1Q5LA 3QE6A 3D52A 1OA1A 2OBLA 1QWNA 3VEAA 4R5GA 3B52X 2KHOA 3D2FA 3B53X 3ZEFA 1TQWA 2EWFA 2V0OA 1JQKA 2YI8A 3CVRA 1X04A 2YL6A 2RAJA 1I49A 2F1BA 2YL9A 4EZNA 4WV7A 2WYIA 4FZSA 3EJRA 2RAIA 2OW6A 3DQGA 4DCNC 3HAJA 4JNFA 3D4YA 3SBTB 4H6IA 2ZXQA 3BUPA 2OO2A 3OWGA 2F18A 1U00A 4MQDA 4JN4A 3C7NB 3DDGA 3I01A 4EZTA 3DX0A 1R5EA 1QWUA 4PO2A 1HTYA 1URUA 4I43A 2RT6A 4EZRA 2ELBA 3D4ZA 4EZZA 2MI7A 3L3PA 4IM0A 4AZBA 3HAIA 3BLBA 1E1DA 3BVXA 1HXKA 4DYLA 1O7DB 3BUIA 3DYTA 4HR1A 1TQTA 4AZGA 4IW0A 3O3OB 1ZYLA 4JWEA 4AZIA 2Q13A 2WYHA 4AZHA 4IWOA 1SU7A 4M0MA 1I4DA 4JWCA 3D50A 3LVTA 3KDRA 4IWQA 3T46A 2O0I1 3RV1A 3Q0KA 1SUFA 5C5BA 1TQVA 4HYBA 1CKRA 4KIKA 3EJTA 4NQIA 2X3VA 4WV5A 1TQSA 2GAFD 4AZ6A 4D8JA 4EZOA 4IM3A 2V7YA 2JNSA 3I04A 2X5CA 4EZPA 1TQUA 3VKHA 1X03A 2FICA 4UDXX 2BPRA 4AVMA 2N3KA 2LXYA 1ZWWA 4UDYX 3RV0A 1I4TA 4EZXA 2OZNB 2F7OA 4JLCA 2QKWA 2YLAA 2YIAA 4ATMA 1R34A 3D51A 3ACOA 1W9MA 1GN9A 4ILIA 3H0XA 3BUQA 2X3XA 2FYVA 3VEBA 2Q12A 1QX1A 2F7QA 4EZQA 3O3NB 2D1LA 4JL9A 3C7NA 3DPPA 2YIBA 1OAOA 1GNLA 1SU8A 3T47A 3GI7A 4BNEA 3DX3A 4E81A 1I4LA 3UITA 2YL5A 3ZEDA 4WPEA 2ND0A 1E2UA 2PMRA 4FZOA 2QXLA 3M3WA 1DKYA 2JNKA 3QNIA 3DPOA 1E9VA 3HAHA 3BVUA
chains in the Genus database with same CATH topology
3I04A 2X5CA 4R5KA 4EZPA 3DQGA 3VKHA 3LMFA 3DOBA 3L3OM 4UDXX 1GNTA 2BPRA 1OA0A 2N3KA 3O3MB 5TKYA 2YI9A 3D2EA 4JNFA 4EZUA 4UDYX 3RV0A 3ERCC 3SBTB 2QFFA 4H6IA 4JNEA 4R5LA 3OWGA 4EZXA 7HSCA 1U00A 2GA9D 4MQDA 4H6HA 4HY9A 4JN4A 2YIVX 4HR1B 4JLCA 3C7NB 2YIAA 3I01A 4EZVA 3KAWA 4EZTA 4PO2A 3FD9A 4FL9A 1W9MA 1SU6A 2EX3B 4R5JA 2NCZA 4IWPA 1GN9A 4ILIA 3H0XA 4I43A 1DKXA 3A98A 2OP6A 2RT6A 4EZRA 4B9QA 4EZZA 4JWDA 2OBMA 3KAVA 4IM0A 3N8EA 3VEBA 1E1DA 3T4AG 4G6QA 1MJGA 4EZQA 3O3NB 5E84A 1DG4A 4JWIA 4R5IA 3ER8C 4JL9A 4HR1A 3C7NA 1BPRA 3B51X 2LM0A 3DPQA 4IW0A 4KIKB 3F7WA 3O3OB 1ZYLA 3DPPA 4JWEA 3SBSA 2YIBA 4F01A 3I39X 3ER9B 1OAOA 4IM2A 5FIGA 1DKZA 4ILGA 2ND1A 3QNJA 4IWOA 4ILHB 4EZWA 1SU7A 4M0MA 1UPXA 4JWCA 1GNLA 1YUWA 4FM3A 1SU8A 3T49A 3KDRA 4IWQA 3T47A 3T46A 3GI7A 1Q5LA 3T48A 4E81A 3OHXM 3RV1A 2PY6A 1SUFA 1OA1A 2OBLA 4EZYA 3VEAA 3UITA 4R5GA 3B52X 4HYBA 1CKRA 3ZEDA 2KHOA 3D2FA 3B53X 4KIKA 3ZEFA 2WINM 4F00A 2EWFA 2Z8YA 2ND0A 1E2UA 1JQKA 2QXLA 4NPHA 2YI8A 1DKYA 4WV5A 4EZSA 2GAFD 3QA8A 4D8JA 3DPOA 4EZOA 4E3CA 4EZNA 4IM3A 2V7YA 1E9VA 4WV7A 2JNSA 5FLEX
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PO2 A;  1BPR A;  4R5K A;  4EZY A;  4EZP A;  4FL9 A;  3DPQ A;  4R5G A;  3DQG A;  4E81 A;  3DOB A;  4R5J A;  4HYB A;  1CKR A;  3L3O M;  2KHO A;  3D2F A;  3DPP A;  4JWE A;  2BPR A;  3H0X A;  2WIN M;  4F01 A;  4F00 A;  1DKX A;  5TKY A;  2OP6 A;  3D2E A;  4JNF A;  4EZU A;  4EZR A;  2QXL A;  1DKZ A;  4B9Q A;  4EZZ A;  1DKY A;  3QNJ A;  2QFF A;  4H6I A;  4JWD A;  4EZW A;  4WV5 A;  4JWC A;  3N8E A;  4JNE A;  4R5L A;  4EZS A;  1YUW A;  4EZX A;  7HSC A;  1U00 A;  3T4A G;  3DPO A;  4EZO A;  4H6H A;  4HY9 A;  4JN4 A;  3T47 A;  3T49 A;  4EZQ A;  4EZN A;  3T46 A;  2V7Y A;  5E84 A;  3C7N B;  4WV7 A;  1Q5L A;  4JWI A;  4R5I A;  3T48 A;  3OHX M;  1DG4 A;  4EZV A;  4EZT A;  3C7N A; 
#chains in the Genus database with same CATH topology
 3LMF A;  3DOB A;  1GNT A;  1OA0 A;  3O3M B;  1Y2O A;  3D2E A;  4EZU A;  1LQ7 A;  3ERC C;  3DX2 A;  3CV5 A;  4JNE A;  7HSC A;  2GA9 D;  2F1A A;  2YIV X;  3QWE A;  4EZV A;  3KAW A;  2D4C A;  3FD9 A;  4FL9 A;  1SU6 A;  2EX3 B;  2NCZ A;  4AZC B;  2OP6 A;  4B9Q A;  1O7D C;  2RAK A;  3N8E A;  2YLL A;  2C08 A;  3T4A G;  4G6Q A;  3ABH A;  3EJQ A;  4WPC A;  1DG4 A;  4R5I A;  3CZN A;  3DPQ A;  3F7W A;  3SBS A;  4F01 A;  4IM2 A;  4ILG A;  2ND1 A;  4EZW A;  1YUW A;  3RPM A;  3T49 A;  5KBP A;  3SYV A;  3BVW A;  3T48 A;  3EJU A;  3OHX M;  3BVT A;  2PY6 A;  4EZY A;  4I1Q A;  3CZS A;  2GF4 A;  2YKT A;  2WIN M;  4F00 A;  2Z8Y A;  3BUD A;  4NPH A;  4EZS A;  3QA8 A;  4E3C A;  3CAZ A;  3OK8 A;  5FLE X;  3CKD A;  4R5K A;  4AZ5 A;  4AZ7 A;  3L3O M;  5TKY A;  2YI9 A;  3BUB A;  4NSW A;  2QFF A;  2ALW A;  4R5L A;  3G9G A;  4H8S A;  1PS3 A;  4H6H A;  4HY9 A;  2F7P A;  1YWM A;  4HR1 B;  2Z0V A;  3I2W A;  4R5J A;  4IWP A;  1DKX A;  3A98 A;  1R33 A;  2Z0O A;  2X3W A;  1WDZ A;  3SOG A;  4JWD A;  3LLL A;  2OBM A;  3KAV A;  2YL8 A;  4FZP A;  1MJG A;  2EFL A;  3DDF A;  3EJS A;  2Z0N A;  2OW7 A;  5E84 A;  4JWI A;  3ER8 C;  5C5B B;  3Q84 A;  4AKV A;  1BPR A;  3B51 X;  2LM0 A;  3EJP A;  3BVV A;  4KIK B;  2F7R A;  3PLT A;  3I39 X;  3ER9 B;  5FIG A;  1DKZ A;  4AZC A;  3QNJ A;  4ILH B;  1UPX A;  3DX1 A;  4FM3 A;  3DX4 A;  2EFK A;  1HWW A;  1Q5L A;  3QE6 A;  3D52 A;  1OA1 A;  2OBL A;  1QWN A;  3VEA A;  4R5G A;  3B52 X;  2KHO A;  3D2F A;  3B53 X;  3ZEF A;  1TQW A;  2EWF A;  2V0O A;  1JQK A;  2YI8 A;  3CVR A;  1X04 A;  2YL6 A;  2RAJ A;  1I49 A;  2F1B A;  2YL9 A;  4EZN A;  4WV7 A;  2WYI A;  4FZS A;  3EJR A;  2RAI A;  2OW6 A;  3DQG A;  4DCN C;  3HAJ A;  4JNF A;  3D4Y A;  3SBT B;  4H6I A;  2ZXQ A;  3BUP A;  2OO2 A;  3OWG A;  2F18 A;  1U00 A;  4MQD A;  4JN4 A;  3C7N B;  3DDG A;  3I01 A;  4EZT A;  3DX0 A;  1R5E A;  1QWU A;  4PO2 A;  1HTY A;  1URU A;  4I43 A;  2RT6 A;  4EZR A;  2ELB A;  3D4Z A;  4EZZ A;  2MI7 A;  3L3P A;  4IM0 A;  4AZB A;  3HAI A;  3BLB A;  1E1D A;  3BVX A;  1HXK A;  4DYL A;  1O7D B;  3BUI A;  3DYT A;  4HR1 A;  1TQT A;  4AZG A;  4IW0 A;  3O3O B;  1ZYL A;  4JWE A;  4AZI A;  2Q13 A;  2WYH A;  4AZH A;  4IWO A;  1SU7 A;  4M0M A;  1I4D A;  4JWC A;  3D50 A;  3LVT A;  3KDR A;  4IWQ A;  3T46 A;  2O0I 1;  3RV1 A;  3Q0K A;  1SUF A;  5C5B A;  1TQV A;  4HYB A;  1CKR A;  4KIK A;  3EJT A;  4NQI A;  2X3V A;  4WV5 A;  1TQS A;  2GAF D;  4AZ6 A;  4D8J A;  4EZO A;  4IM3 A;  2V7Y A;  2JNS A;  3I04 A;  2X5C A;  4EZP A;  1TQU A;  3VKH A;  1X03 A;  2FIC A;  4UDX X;  2BPR A;  4AVM A;  2N3K A;  2LXY A;  1ZWW A;  4UDY X;  3RV0 A;  1I4T A;  4EZX A;  2OZN B;  2F7O A;  4JLC A;  2QKW A;  2YLA A;  2YIA A;  4ATM A;  1R34 A;  3D51 A;  3ACO A;  1W9M A;  1GN9 A;  4ILI A;  3H0X A;  3BUQ A;  2X3X A;  2FYV A;  3VEB A;  2Q12 A;  1QX1 A;  2F7Q A;  4EZQ A;  3O3N B;  2D1L A;  4JL9 A;  3C7N A;  3DPP A;  2YIB A;  1OAO A;  1GNL A;  1SU8 A;  3T47 A;  3GI7 A;  4BNE A;  3DX3 A;  4E81 A;  1I4L A;  3UIT A;  2YL5 A;  3ZED A;  4WPE A;  2ND0 A;  1E2U A;  2PMR A;  4FZO A;  2QXL A;  3M3W A;  1DKY A;  2JNK A;  3QNI A;  3DPO A;  1E9V A;  3HAH A;  3BVU A; 
#chains in the Genus database with same CATH homology
 3I04 A;  2X5C A;  4R5K A;  4EZP A;  3DQG A;  3VKH A;  3LMF A;  3DOB A;  3L3O M;  4UDX X;  1GNT A;  2BPR A;  1OA0 A;  2N3K A;  3O3M B;  5TKY A;  2YI9 A;  3D2E A;  4JNF A;  4EZU A;  4UDY X;  3RV0 A;  3ERC C;  3SBT B;  2QFF A;  4H6I A;  4JNE A;  4R5L A;  3OWG A;  4EZX A;  7HSC A;  1U00 A;  2GA9 D;  4MQD A;  4H6H A;  4HY9 A;  4JN4 A;  2YIV X;  4HR1 B;  4JLC A;  3C7N B;  2YIA A;  3I01 A;  4EZV A;  3KAW A;  4EZT A;  4PO2 A;  3FD9 A;  4FL9 A;  1W9M A;  1SU6 A;  2EX3 B;  4R5J A;  2NCZ A;  4IWP A;  1GN9 A;  4ILI A;  3H0X A;  4I43 A;  1DKX A;  3A98 A;  2OP6 A;  2RT6 A;  4EZR A;  4B9Q A;  4EZZ A;  4JWD A;  2OBM A;  3KAV A;  4IM0 A;  3N8E A;  3VEB A;  1E1D A;  3T4A G;  4G6Q A;  1MJG A;  4EZQ A;  3O3N B;  5E84 A;  1DG4 A;  4JWI A;  4R5I A;  3ER8 C;  4JL9 A;  4HR1 A;  3C7N A;  1BPR A;  3B51 X;  2LM0 A;  3DPQ A;  4IW0 A;  4KIK B;  3F7W A;  3O3O B;  1ZYL A;  3DPP A;  4JWE A;  3SBS A;  2YIB A;  4F01 A;  3I39 X;  3ER9 B;  1OAO A;  4IM2 A;  5FIG A;  1DKZ A;  4ILG A;  2ND1 A;  3QNJ A;  4IWO A;  4ILH B;  4EZW A;  1SU7 A;  4M0M A;  1UPX A;  4JWC A;  1GNL A;  1YUW A;  4FM3 A;  1SU8 A;  3T49 A;  3KDR A;  4IWQ A;  3T47 A;  3T46 A;  3GI7 A;  1Q5L A;  3T48 A;  4E81 A;  3OHX M;  3RV1 A;  2PY6 A;  1SUF A;  1OA1 A;  2OBL A;  4EZY A;  3VEA A;  3UIT A;  4R5G A;  3B52 X;  4HYB A;  1CKR A;  3ZED A;  2KHO A;  3D2F A;  3B53 X;  4KIK A;  3ZEF A;  2WIN M;  4F00 A;  2EWF A;  2Z8Y A;  2ND0 A;  1E2U A;  1JQK A;  2QXL A;  4NPH A;  2YI8 A;  1DKY A;  4WV5 A;  4EZS A;  2GAF D;  3QA8 A;  4D8J A;  3DPO A;  4EZO A;  4E3C A;  4EZN A;  4IM3 A;  2V7Y A;  1E9V A;  4WV7 A;  2JNS A;  5FLE X; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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