3N8EA

Substrate binding domain of the human heat shock 70kda protein 9 (mortalin)
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
159
structure length
159
Chain Sequence
DVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKME
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Substrate binding domain of the human Heat Shock 70kDa protein 9 (mortalin)
rcsb
molecule tags Chaperone
source organism Homo sapiens
molecule keywords Stress-70 protein, mitochondrial
total genus 42
structure length 159
sequence length 159
chains with identical sequence B
ec nomenclature
pdb deposition date 2010-05-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.34.10 Mainly Beta Sandwich Substrate Binding Domain Of DNAk; Chain A, domain 1 Substrate Binding Domain Of DNAk; Chain A, domain 1 3n8eA00
5E84A 2V7YA 1U00A 4EZOA 4R5GA 1Q5LA 4JNEA 4EZSA 4PO2A 2QXLA 4R5LA 4EZNA 4EZWA 3D2FA 4JWIA 4JNFA 4WV5A 3C7NB 4R5IA 1DKYA 4F00A 1DKZA 4B9QA 4E81A 5TKYA 7HSCA 4JWEA 2BPRA 4EZUA 4FL9A 3DPOA 3DQGA 3DPPA 4EZPA 1DKXA 1CKRA 4JN4A 4JWDA 4EZZA 3DOBA 4EZQA 1DG4A 4EZXA 4HYBA 4F01A 1BPRA 1YUWA 4HY9A 4EZVA 4R5JA 3D2EA 2OP6A 3H0XA 4R5KA 3N8EA 3C7NA 4EZTA 4EZYA 4JWCA 4WV7A 3QNJA 3DPQA 4EZRA 2KHOA
chains in the Genus database with same CATH superfamily
5E84A 2V7YA 1U00A 4EZOA 4R5GA 1Q5LA 4JNEA 3ZEFA 4EZSA 4PO2A 2QXLA 4R5LA 4EZNA 4EZWA 3D2FA 4JWIA 4JNFA 4WV5A 3C7NB 4R5IA 4I43A 1DKYA 3SBSA 4F00A 1DKZA 4B9QA 4E81A 5TKYA 7HSCA 4JWEA 2BPRA 4EZUA 4FL9A 4ILIA 3DPOA 3DQGA 3DPPA 4EZPA 1DKXA 1CKRA 4JN4A 3SBTB 4JWDA 4EZZA 3DOBA 4EZQA 1DG4A 4EZXA 4HYBA 4F01A 1BPRA 1YUWA 4HY9A 4EZVA 4R5JA 3D2EA 2OP6A 3H0XA 4R5KA 3N8EA 3C7NA 4MQDA 4EZTA 4ILGA 4ILHB 4EZYA 4JWCA 4WV7A 3QNJA 3DPQA 4EZRA 2KHOA
chains in the Genus database with same CATH topology
5E84A 2V7YA 1U00A 4EZOA 4R5GA 1Q5LA 4JNEA 3ZEFA 4EZSA 4PO2A 2QXLA 4R5LA 4EZNA 4EZWA 3D2FA 4JWIA 4JNFA 4WV5A 3C7NB 4R5IA 4I43A 1DKYA 3SBSA 4F00A 1DKZA 4B9QA 4E81A 5TKYA 7HSCA 4JWEA 2BPRA 4EZUA 4FL9A 4ILIA 3DPOA 3DQGA 3DPPA 4EZPA 1DKXA 1CKRA 4JN4A 3SBTB 4JWDA 4EZZA 3DOBA 4EZQA 1DG4A 4EZXA 4HYBA 4F01A 1BPRA 1YUWA 4HY9A 4EZVA 4R5JA 3D2EA 2OP6A 3H0XA 4R5KA 3N8EA 3C7NA 4MQDA 4EZTA 4ILGA 4ILHB 4EZYA 4JWCA 4WV7A 3QNJA 3DPQA 4EZRA 2KHOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E84 A;  2V7Y A;  1U00 A;  4EZO A;  4R5G A;  1Q5L A;  4JNE A;  4EZS A;  4PO2 A;  2QXL A;  4R5L A;  4EZN A;  4EZW A;  3D2F A;  4JWI A;  4JNF A;  4WV5 A;  3C7N B;  4R5I A;  1DKY A;  4F00 A;  1DKZ A;  4B9Q A;  4E81 A;  5TKY A;  7HSC A;  4JWE A;  2BPR A;  4EZU A;  4FL9 A;  3DPO A;  3DQG A;  3DPP A;  4EZP A;  1DKX A;  1CKR A;  4JN4 A;  4JWD A;  4EZZ A;  3DOB A;  4EZQ A;  1DG4 A;  4EZX A;  4HYB A;  4F01 A;  1BPR A;  1YUW A;  4HY9 A;  4EZV A;  4R5J A;  3D2E A;  2OP6 A;  3H0X A;  4R5K A;  3N8E A;  3C7N A;  4EZT A;  4EZY A;  4JWC A;  4WV7 A;  3QNJ A;  3DPQ A;  4EZR A;  2KHO A; 
#chains in the Genus database with same CATH topology
 5E84 A;  2V7Y A;  1U00 A;  4EZO A;  4R5G A;  1Q5L A;  4JNE A;  3ZEF A;  4EZS A;  4PO2 A;  2QXL A;  4R5L A;  4EZN A;  4EZW A;  3D2F A;  4JWI A;  4JNF A;  4WV5 A;  3C7N B;  4R5I A;  4I43 A;  1DKY A;  3SBS A;  4F00 A;  1DKZ A;  4B9Q A;  4E81 A;  5TKY A;  7HSC A;  4JWE A;  2BPR A;  4EZU A;  4FL9 A;  4ILI A;  3DPO A;  3DQG A;  3DPP A;  4EZP A;  1DKX A;  1CKR A;  4JN4 A;  3SBT B;  4JWD A;  4EZZ A;  3DOB A;  4EZQ A;  1DG4 A;  4EZX A;  4HYB A;  4F01 A;  1BPR A;  1YUW A;  4HY9 A;  4EZV A;  4R5J A;  3D2E A;  2OP6 A;  3H0X A;  4R5K A;  3N8E A;  3C7N A;  4MQD A;  4EZT A;  4ILG A;  4ILH B;  4EZY A;  4JWC A;  4WV7 A;  3QNJ A;  3DPQ A;  4EZR A;  2KHO A; 
#chains in the Genus database with same CATH homology
 5E84 A;  2V7Y A;  1U00 A;  4EZO A;  4R5G A;  1Q5L A;  4JNE A;  3ZEF A;  4EZS A;  4PO2 A;  2QXL A;  4R5L A;  4EZN A;  4EZW A;  3D2F A;  4JWI A;  4JNF A;  4WV5 A;  3C7N B;  4R5I A;  4I43 A;  1DKY A;  3SBS A;  4F00 A;  1DKZ A;  4B9Q A;  4E81 A;  5TKY A;  7HSC A;  4JWE A;  2BPR A;  4EZU A;  4FL9 A;  4ILI A;  3DPO A;  3DQG A;  3DPP A;  4EZP A;  1DKX A;  1CKR A;  4JN4 A;  3SBT B;  4JWD A;  4EZZ A;  3DOB A;  4EZQ A;  1DG4 A;  4EZX A;  4HYB A;  4F01 A;  1BPR A;  1YUW A;  4HY9 A;  4EZV A;  4R5J A;  3D2E A;  2OP6 A;  3H0X A;  4R5K A;  3N8E A;  3C7N A;  4MQD A;  4EZT A;  4ILG A;  4ILH B;  4EZY A;  4JWC A;  4WV7 A;  3QNJ A;  3DPQ A;  4EZR A;  2KHO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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