4P1OA

Crystal structure of the bateman domain of murine magnesium transporter cnnm2 bound to atp-mg
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
152
structure length
152
Chain Sequence
MEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTLEDVIEEIIKSE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Metal transporter CNNM2
publication title Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
rcsb
source organism Mus musculus
total genus 42
structure length 152
sequence length 152
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-02-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00571 CBS CBS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.580.10 Alpha Beta Roll CBS-domain CBS-domain 4p1oA00
2QRDE 3GBYA 1PBJA 4L3VA 4HG0A 5KS7A 2YVYA 3FNAA 4IY3A 5MMZA 2QH1A 3SL7A 3L31A 3I8NA 2YVZA 4PCUA 4P1OA 2O16A 2NYEA 3LFZA 1XKFA 2D4ZA 4GQYA 2QLVC 3OCMA 4IY4A 3KXRA 2EF7A 3HF7A 3FHMA 3K6EA 4IY2A 4L28A 4P1GA 4L0DA 5LXQA 3L2BA 5K24C 4IYSA 2QRCE 4COOA 1YAVA 2UV5A 2OOYE 4L27A 3KPDA 3TDHC 4GQWA 2P9MA 4NOCA 1PVMA 3LQNA 2PFIA 3FWSA 3OI8A 2RIHA 3PC2A 2QR1E 4ESYA 2UV4A 2OOXE 4UUUA 2QREE 3KH5A 5K25C 4ESYB 3KPBA 3LHHA 5K23C 2ZY9A 2UV6A 3DDJA 2YZQA 3FV6A 2UV7A 2EMQA 4IY0A 2RIFA 1O50A 5IIPA 2OUXA 2YZIA 3OCOA 5K22B 3T4NC 2YVXA 4GQVA 4O9KA 3FWRA 3KPCA 2RC3A 3PC4A 3ORGA 3TE5C 1Y5HA 4FRYA 3PC3A 3LV9A 4FXSA 2NYCA 4DQWA 3K2VA
chains in the Genus database with same CATH superfamily
2QRDE 3GBYA 1PBJA 4L3VA 4HG0A 5KS7A 2YVYA 3FNAA 4IY3A 5MMZA 2QH1A 3SL7A 3L31A 3I8NA 2YVZA 4PCUA 4P1OA 2O16A 2NYEA 3LFZA 1XKFA 2D4ZA 2J9LA 4GQYA 2QLVC 3OCMA 4IY4A 3KXRA 2EF7A 3HF7A 3FHMA 3K6EA 4IY2A 4L28A 4P1GA 4L0DA 5LXQA 3L2BA 5K24C 4IYSA 2QRCE 4COOA 1YAVA 2UV5A 2OOYE 4L27A 3KPDA 3TDHC 2JA3A 4GQWA 2P9MA 4NOCA 1PVMA 3LQNA 2PFIA 3FWSA 3OI8A 2RIHA 3PC2A 2QR1E 4ESYA 2UV4A 2OOXE 4UUUA 2QREE 3KH5A 5K25C 4ESYB 3KPBA 3LHHA 5K23C 2ZY9A 2UV6A 3DDJA 2YZQA 3FV6A 2UV7A 2EMQA 4IY0A 2RIFA 1O50A 5IIPA 2OUXA 2YZIA 3OCOA 5K22B 3T4NC 2YVXA 4GQVA 4O9KA 3FWRA 3KPCA 2RC3A 3PC4A 3ORGA 3TE5C 1Y5HA 4FRYA 3PC3A 3LV9A 4FXSA 2NYCA 4DQWA 3K2VA
chains in the Genus database with same CATH topology
2QRDE 3GBYA 1PBJA 4L3VA 4HG0A 5KS7A 2YVYA 3FNAA 4IY3A 5MMZA 2QH1A 3SL7A 3L31A 3I8NA 2YVZA 4PCUA 4P1OA 2O16A 2NYEA 3LFZA 1XKFA 2D4ZA 2J9LA 4GQYA 2QLVC 3OCMA 4IY4A 3KXRA 2EF7A 3HF7A 3FHMA 3K6EA 4IY2A 4L28A 4P1GA 4L0DA 5LXQA 3L2BA 5K24C 4IYSA 2QRCE 4COOA 1YAVA 2UV5A 2OOYE 4L27A 3KPDA 3TDHC 2JA3A 4GQWA 2P9MA 4NOCA 1PVMA 3LQNA 2PFIA 3FWSA 3OI8A 2RIHA 3PC2A 2QR1E 4ESYA 2UV4A 2OOXE 4UUUA 2QREE 3KH5A 5K25C 4ESYB 3KPBA 3LHHA 5K23C 2ZY9A 2UV6A 3DDJA 2YZQA 3FV6A 2UV7A 2EMQA 4IY0A 2RIFA 1O50A 5IIPA 2OUXA 2YZIA 3OCOA 5K22B 3T4NC 2YVXA 4GQVA 4O9KA 3FWRA 3KPCA 2RC3A 3PC4A 3ORGA 3TE5C 1Y5HA 4FRYA 3PC3A 3LV9A 4FXSA 2NYCA 4DQWA 3K2VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QRD E;  3GBY A;  1PBJ A;  4L3V A;  4HG0 A;  5KS7 A;  2YVY A;  3FNA A;  4IY3 A;  5MMZ A;  2QH1 A;  3SL7 A;  3L31 A;  3I8N A;  2YVZ A;  4PCU A;  4P1O A;  2O16 A;  2NYE A;  3LFZ A;  1XKF A;  2D4Z A;  4GQY A;  2QLV C;  3OCM A;  4IY4 A;  3KXR A;  2EF7 A;  3HF7 A;  3FHM A;  3K6E A;  4IY2 A;  4L28 A;  4P1G A;  4L0D A;  5LXQ A;  3L2B A;  5K24 C;  4IYS A;  2QRC E;  4COO A;  1YAV A;  2UV5 A;  2OOY E;  4L27 A;  3KPD A;  3TDH C;  4GQW A;  2P9M A;  4NOC A;  1PVM A;  3LQN A;  2PFI A;  3FWS A;  3OI8 A;  2RIH A;  3PC2 A;  2QR1 E;  4ESY A;  2UV4 A;  2OOX E;  4UUU A;  2QRE E;  3KH5 A;  5K25 C;  4ESY B;  3KPB A;  3LHH A;  5K23 C;  2ZY9 A;  2UV6 A;  3DDJ A;  2YZQ A;  3FV6 A;  2UV7 A;  2EMQ A;  4IY0 A;  2RIF A;  1O50 A;  5IIP A;  2OUX A;  2YZI A;  3OCO A;  5K22 B;  3T4N C;  2YVX A;  4GQV A;  4O9K A;  3FWR A;  3KPC A;  2RC3 A;  3PC4 A;  3ORG A;  3TE5 C;  1Y5H A;  4FRY A;  3PC3 A;  3LV9 A;  4FXS A;  2NYC A;  4DQW A;  3K2V A; 
#chains in the Genus database with same CATH topology
 2QRD E;  3GBY A;  1PBJ A;  4L3V A;  4HG0 A;  5KS7 A;  2YVY A;  3FNA A;  4IY3 A;  5MMZ A;  2QH1 A;  3SL7 A;  3L31 A;  3I8N A;  2YVZ A;  4PCU A;  4P1O A;  2O16 A;  2NYE A;  3LFZ A;  1XKF A;  2D4Z A;  2J9L A;  4GQY A;  2QLV C;  3OCM A;  4IY4 A;  3KXR A;  2EF7 A;  3HF7 A;  3FHM A;  3K6E A;  4IY2 A;  4L28 A;  4P1G A;  4L0D A;  5LXQ A;  3L2B A;  5K24 C;  4IYS A;  2QRC E;  4COO A;  1YAV A;  2UV5 A;  2OOY E;  4L27 A;  3KPD A;  3TDH C;  2JA3 A;  4GQW A;  2P9M A;  4NOC A;  1PVM A;  3LQN A;  2PFI A;  3FWS A;  3OI8 A;  2RIH A;  3PC2 A;  2QR1 E;  4ESY A;  2UV4 A;  2OOX E;  4UUU A;  2QRE E;  3KH5 A;  5K25 C;  4ESY B;  3KPB A;  3LHH A;  5K23 C;  2ZY9 A;  2UV6 A;  3DDJ A;  2YZQ A;  3FV6 A;  2UV7 A;  2EMQ A;  4IY0 A;  2RIF A;  1O50 A;  5IIP A;  2OUX A;  2YZI A;  3OCO A;  5K22 B;  3T4N C;  2YVX A;  4GQV A;  4O9K A;  3FWR A;  3KPC A;  2RC3 A;  3PC4 A;  3ORG A;  3TE5 C;  1Y5H A;  4FRY A;  3PC3 A;  3LV9 A;  4FXS A;  2NYC A;  4DQW A;  3K2V A; 
#chains in the Genus database with same CATH homology
 2QRD E;  3GBY A;  1PBJ A;  4L3V A;  4HG0 A;  5KS7 A;  2YVY A;  3FNA A;  4IY3 A;  5MMZ A;  2QH1 A;  3SL7 A;  3L31 A;  3I8N A;  2YVZ A;  4PCU A;  4P1O A;  2O16 A;  2NYE A;  3LFZ A;  1XKF A;  2D4Z A;  2J9L A;  4GQY A;  2QLV C;  3OCM A;  4IY4 A;  3KXR A;  2EF7 A;  3HF7 A;  3FHM A;  3K6E A;  4IY2 A;  4L28 A;  4P1G A;  4L0D A;  5LXQ A;  3L2B A;  5K24 C;  4IYS A;  2QRC E;  4COO A;  1YAV A;  2UV5 A;  2OOY E;  4L27 A;  3KPD A;  3TDH C;  2JA3 A;  4GQW A;  2P9M A;  4NOC A;  1PVM A;  3LQN A;  2PFI A;  3FWS A;  3OI8 A;  2RIH A;  3PC2 A;  2QR1 E;  4ESY A;  2UV4 A;  2OOX E;  4UUU A;  2QRE E;  3KH5 A;  5K25 C;  4ESY B;  3KPB A;  3LHH A;  5K23 C;  2ZY9 A;  2UV6 A;  3DDJ A;  2YZQ A;  3FV6 A;  2UV7 A;  2EMQ A;  4IY0 A;  2RIF A;  1O50 A;  5IIP A;  2OUX A;  2YZI A;  3OCO A;  5K22 B;  3T4N C;  2YVX A;  4GQV A;  4O9K A;  3FWR A;  3KPC A;  2RC3 A;  3PC4 A;  3ORG A;  3TE5 C;  1Y5H A;  4FRY A;  3PC3 A;  3LV9 A;  4FXS A;  2NYC A;  4DQW A;  3K2V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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