1ANNA

Annexin iv
Total Genus 125

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
125
sequence length
315
structure length
315
Chain Sequence
GGTVKAASGFNAAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCGGDD
5010015020025030030025020015010050
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV1 (10-13)AH1 (15-26)AH2 (33-41)AH5 (73-83)AH6 (86-98)AH7 (105-114)AH17 (264-290)TVIII1 (100-103)AH9 (135-142)AH16 (245-257)AH15 (229-243)AH10 (145-156)AH8 (117-131)AH12 (189-198)AH11 (167-183)TIV2 (183-186)TIV3 (186-189)AH3 (45-59)AH4 (63-70)AH13 (201-215)AH14 (219-226)AH19 (304-314)AH18 (294-301)Updating...
connected with : NaN
molecule tags Calcium/phospholipid-binding protein
publication title Three Dimensional Structure of Annexin IV
rcsb
molecule keywords ANNEXIN IV
total genus 125
structure length 315
sequence length 315
ec nomenclature
pdb deposition date 1995-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1annA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1annA01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1annA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1annA03
2H0KA 1XJLA 1HVEA 1ANWA 1YCNA 2IE6A 1BC0A 2XO3A 2XO2A 1G5NA 3BRXA 2H0LA 1N44A 4MDUA 4EVFA 1MCXA 1W3WA 2H0MA 4MDVA 1W7BA 2HYVA 1BCWA 1HVGA 1ANXA 1AVRA 1ALAA 1AVCA 1AVHA 1YIIA 2HYWA 1YJ0A 1N42A 1A8BA 1HM6A 1HVDA 1N00A 1AOWA 1BCYA 1HVFA 2ZOCA 2IICA 4EVHA 2II2A 1ANNA 1DK5A 1BC3A 1W45A 1DM5A 2IE7A 4HREA 4X9PA 2ZHIA 1BO9A 1AIIA 1AEIA 1SAVA 2HYUA 1N41A 1AXNA 1M9IA 2Q4CA 1A8AA 1BCZA 1I4AA 1BC1A 1HAKA 2ZHJA 2RANA
chains in the Genus database with same CATH superfamily
4C0AA 2H0KA 3BRXA 1N44A 2HYVA 1AVRA 3AO0A 4C7PA 1N42A 1HM6A 4L5MA 3ABOA 1DK5A 1BC3A 1AIIA 2HYUA 4D7RA 3USWA 1PBVA 1Q8DA 1R4AE 1AXNA 3TW5A 4Z21A 1A8AA 1BC1A 2QEZA 1QC7A 1LKVX 1HVEA 1YCNA 1R8SE 1BC0A 4FQ0C 4JWLA 3ANYA 4EVFA 1W3WA 2H0MA 4MDVA 1C1KA 1HVGA 1ANXA 1AVHA 4KN7X 2HSNA 4FHRB 1HVDA 1AOWA 2K6XA 2IICA 4KMUX 4JK1X 1ANNA 4JXHA 4JMOA 1DM5A 4X9PA 1SAVA 1HAKA 1RE0B 1UPTB 4D7QA 1XJLA 3SWVA 3L8NA 1G5NA 1R8QE 4MDUA 4Q2SA 1MCXA 4A4PA 1R8ME 1BCWA 4OIYA 1ALAA 1A8BA 2OY9A 2ZOCA 3LTLA 1W45A 2IE7A 3AJCA 1BO9A 1S9DE 1XSZA 2R09A 2Q4CA 1BCZA 1I4AA 3HJLA 4KN4X 2ZHJA 2RANA 1KU1A 1ANWA 2IE6A 2XO3A 2XO2A 2H0LA 3ABRA 1W7BA 4JMIA 1AVCA 1YIIA 2HYWA 1YJ0A 1N00A 2R0DA 3USYA 3ABSA 1BCYA 1HVFA 1BC9A 4EVHA 2II2A 2VXGA 4HREA 2ZHIA 1AEIA 3SOHB 1N41A 3ABQA 1XT0B 1M9IA 1YGMA
chains in the Genus database with same CATH topology
2H0KA 1XJLA 1HVEA 1ANWA 1YCNA 2IE6A 1BC0A 2XO3A 2XO2A 1G5NA 3BRXA 2H0LA 1N44A 4MDUA 4EVFA 1MCXA 1W3WA 2H0MA 4MDVA 1W7BA 2HYVA 1BCWA 1HVGA 1ANXA 1AVRA 1ALAA 1AVCA 1AVHA 1YIIA 2HYWA 1YJ0A 1N42A 1A8BA 1HM6A 1HVDA 1N00A 1AOWA 1BCYA 1HVFA 2ZOCA 2IICA 4EVHA 2II2A 1ANNA 1DK5A 1BC3A 1W45A 1DM5A 2IE7A 4HREA 4X9PA 2ZHIA 1BO9A 1AIIA 1AEIA 1SAVA 2HYUA 1N41A 1AXNA 1M9IA 2Q4CA 1A8AA 1BCZA 1I4AA 1BC1A 1HAKA 2ZHJA 2RANA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H0K A;  1XJL A;  1HVE A;  1ANW A;  1YCN A;  2IE6 A;  1BC0 A;  2XO3 A;  2XO2 A;  1G5N A;  3BRX A;  2H0L A;  1N44 A;  4MDU A;  4EVF A;  1MCX A;  1W3W A;  2H0M A;  4MDV A;  1W7B A;  2HYV A;  1BCW A;  1HVG A;  1ANX A;  1AVR A;  1ALA A;  1AVC A;  1AVH A;  1YII A;  2HYW A;  1YJ0 A;  1N42 A;  1A8B A;  1HM6 A;  1HVD A;  1N00 A;  1AOW A;  1BCY A;  1HVF A;  2ZOC A;  2IIC A;  4EVH A;  2II2 A;  1ANN A;  1DK5 A;  1BC3 A;  1W45 A;  1DM5 A;  2IE7 A;  4HRE A;  4X9P A;  2ZHI A;  1BO9 A;  1AII A;  1AEI A;  1SAV A;  2HYU A;  1N41 A;  1AXN A;  1M9I A;  2Q4C A;  1A8A A;  1BCZ A;  1I4A A;  1BC1 A;  1HAK A;  2ZHJ A;  2RAN A; 
#chains in the Genus database with same CATH topology
 4C0A A;  2H0K A;  3BRX A;  1N44 A;  2HYV A;  1AVR A;  3AO0 A;  4C7P A;  1N42 A;  1HM6 A;  4L5M A;  3ABO A;  1DK5 A;  1BC3 A;  1AII A;  2HYU A;  4D7R A;  3USW A;  1PBV A;  1Q8D A;  1R4A E;  1AXN A;  3TW5 A;  4Z21 A;  1A8A A;  1BC1 A;  2QEZ A;  1QC7 A;  1LKV X;  1HVE A;  1YCN A;  1R8S E;  1BC0 A;  4FQ0 C;  4JWL A;  3ANY A;  4EVF A;  1W3W A;  2H0M A;  4MDV A;  1C1K A;  1HVG A;  1ANX A;  1AVH A;  4KN7 X;  2HSN A;  4FHR B;  1HVD A;  1AOW A;  2K6X A;  2IIC A;  4KMU X;  4JK1 X;  1ANN A;  4JXH A;  4JMO A;  1DM5 A;  4X9P A;  1SAV A;  1HAK A;  1RE0 B;  1UPT B;  4D7Q A;  1XJL A;  3SWV A;  3L8N A;  1G5N A;  1R8Q E;  4MDU A;  4Q2S A;  1MCX A;  4A4P A;  1R8M E;  1BCW A;  4OIY A;  1ALA A;  1A8B A;  2OY9 A;  2ZOC A;  3LTL A;  1W45 A;  2IE7 A;  3AJC A;  1BO9 A;  1S9D E;  1XSZ A;  2R09 A;  2Q4C A;  1BCZ A;  1I4A A;  3HJL A;  4KN4 X;  2ZHJ A;  2RAN A;  1KU1 A;  1ANW A;  2IE6 A;  2XO3 A;  2XO2 A;  2H0L A;  3ABR A;  1W7B A;  4JMI A;  1AVC A;  1YII A;  2HYW A;  1YJ0 A;  1N00 A;  2R0D A;  3USY A;  3ABS A;  1BCY A;  1HVF A;  1BC9 A;  4EVH A;  2II2 A;  2VXG A;  4HRE A;  2ZHI A;  1AEI A;  3SOH B;  1N41 A;  3ABQ A;  1XT0 B;  1M9I A;  1YGM A; 
#chains in the Genus database with same CATH homology
 2H0K A;  1XJL A;  1HVE A;  1ANW A;  1YCN A;  2IE6 A;  1BC0 A;  2XO3 A;  2XO2 A;  1G5N A;  3BRX A;  2H0L A;  1N44 A;  4MDU A;  4EVF A;  1MCX A;  1W3W A;  2H0M A;  4MDV A;  1W7B A;  2HYV A;  1BCW A;  1HVG A;  1ANX A;  1AVR A;  1ALA A;  1AVC A;  1AVH A;  1YII A;  2HYW A;  1YJ0 A;  1N42 A;  1A8B A;  1HM6 A;  1HVD A;  1N00 A;  1AOW A;  1BCY A;  1HVF A;  2ZOC A;  2IIC A;  4EVH A;  2II2 A;  1ANN A;  1DK5 A;  1BC3 A;  1W45 A;  1DM5 A;  2IE7 A;  4HRE A;  4X9P A;  2ZHI A;  1BO9 A;  1AII A;  1AEI A;  1SAV A;  2HYU A;  1N41 A;  1AXN A;  1M9I A;  2Q4C A;  1A8A A;  1BCZ A;  1I4A A;  1BC1 A;  1HAK A;  2ZHJ A;  2RAN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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