2ZHIA

Crystal structure analysis of the sodium-bound annexin a4 at 1.58 a resolution
Total Genus 126
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
315
structure length
315
Chain Sequence
KGGTVKAASGFNATEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCGGD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Annexin A4
publication title Structural Analysis for the Sodium-Dependent Dissociation of Annexin A4: Crystal Structures of Soduim-Bound Annexin A4 at High Resolutions
rcsb
source organism Rattus norvegicus
molecule tags Metal binding protein
total genus 126
structure length 315
sequence length 315
ec nomenclature
pdb deposition date 2008-02-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2zhiA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2zhiA01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2zhiA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2zhiA03
2HYWA 1N41A 1W7BA 1ANWA 1A8BA 1XJLA 1HM6A 1BC3A 1SAVA 1BCZA 2H0MA 1ANXA 4MDVA 1AIIA 1W3WA 1BCYA 1YCNA 1HVDA 1HVFA 1AOWA 1BC0A 1YIIA 1N00A 1W45A 1HAKA 1HVGA 2Q4CA 1HVEA 1G5NA 1ANNA 1AXNA 4EVHA 2HYUA 1YJ0A 1DM5A 1BCWA 1N42A 4X9PA 1BC1A 1MCXA 2RANA 1AEIA 1AVRA 2IE6A 2XO2A 1DK5A 2XO3A 2ZOCA 1A8AA 2H0KA 1AVCA 1M9IA 1N44A 2HYVA 2IE7A 1AVHA 2II2A 2IICA 1I4AA 4HREA 1BO9A 1ALAA 2H0LA 2ZHIA 4EVFA 2ZHJA 4MDUA 3BRXA
chains in the Genus database with same CATH superfamily
3SWVA 1C1KA 1SAVA 3ABOA 4Z21A 1AIIA 1W3WA 1BCYA 1YCNA 2R09A 2R0DA 3ABQA 1N00A 2Q4CA 3ANYA 1YJ0A 1BC1A 1KU1A 2RANA 2K6XA 2H0KA 1AVCA 2HYVA 4HREA 1ALAA 2QEZA 4EVFA 4JWLA 1RE0B 3BRXA 1Q8DA 1W7BA 1XJLA 3SOHB 4JMOA 1BCZA 4MDVA 3TW5A 2OY9A 3AO0A 1BC0A 3USYA 4FHRB 4JXHA 1W45A 4JMIA 1HAKA 1HVGA 1G5NA 1ANNA 1AXNA 1DM5A 4KN7X 1MCXA 1XSZA 2XO3A 2ZOCA 2IICA 1BO9A 1I4AA 4L5MA 2ZHIA 4MDUA 2HYWA 2VXGA 1ANWA 1A8BA 1HM6A 4D7RA 1BC3A 3USWA 1UPTB 1ANXA 1HVDA 4FQ0C 1YIIA 1R8SE 3ABRA 3LTLA 4EVHA 1PBVA 4A4PA 3ABSA 1R8ME 1XT0B 2XO2A 1AVRA 1DK5A 1YGMA 1A8AA 1N44A 4D7QA 3L8NA 1LKVX 3HJLA 2H0LA 1R4AE 4C0AA 2ZHJA 4C7PA 4OIYA 1N41A 4Q2SA 1R8QE 1QC7A 2HSNA 2H0MA 4JK1X 1HVFA 1AOWA 4KMUX 1HVEA 3AJCA 2HYUA 1N42A 1BCWA 4X9PA 1AEIA 2IE6A 1BC9A 1M9IA 2IE7A 1AVHA 2II2A 1S9DE 4KN4X
chains in the Genus database with same CATH topology
2HYWA 1N41A 1W7BA 1ANWA 1A8BA 1XJLA 1HM6A 1BC3A 1SAVA 1BCZA 2H0MA 1ANXA 4MDVA 1AIIA 1W3WA 1BCYA 1YCNA 1HVDA 1HVFA 1AOWA 1BC0A 1YIIA 1N00A 1W45A 1HAKA 1HVGA 2Q4CA 1HVEA 1G5NA 1ANNA 1AXNA 4EVHA 2HYUA 1YJ0A 1DM5A 1BCWA 1N42A 4X9PA 1BC1A 1MCXA 2RANA 1AEIA 1AVRA 2IE6A 2XO2A 1DK5A 2XO3A 2ZOCA 1A8AA 2H0KA 1AVCA 1M9IA 1N44A 2HYVA 2IE7A 1AVHA 2II2A 2IICA 1I4AA 4HREA 1BO9A 1ALAA 2H0LA 2ZHIA 4EVFA 2ZHJA 4MDUA 3BRXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HYW A;  1N41 A;  1W7B A;  1ANW A;  1A8B A;  1XJL A;  1HM6 A;  1BC3 A;  1SAV A;  1BCZ A;  2H0M A;  1ANX A;  4MDV A;  1AII A;  1W3W A;  1BCY A;  1YCN A;  1HVD A;  1HVF A;  1AOW A;  1BC0 A;  1YII A;  1N00 A;  1W45 A;  1HAK A;  1HVG A;  2Q4C A;  1HVE A;  1G5N A;  1ANN A;  1AXN A;  4EVH A;  2HYU A;  1YJ0 A;  1DM5 A;  1BCW A;  1N42 A;  4X9P A;  1BC1 A;  1MCX A;  2RAN A;  1AEI A;  1AVR A;  2IE6 A;  2XO2 A;  1DK5 A;  2XO3 A;  2ZOC A;  1A8A A;  2H0K A;  1AVC A;  1M9I A;  1N44 A;  2HYV A;  2IE7 A;  1AVH A;  2II2 A;  2IIC A;  1I4A A;  4HRE A;  1BO9 A;  1ALA A;  2H0L A;  2ZHI A;  4EVF A;  2ZHJ A;  4MDU A;  3BRX A; 
#chains in the Genus database with same CATH topology
 3SWV A;  1C1K A;  1SAV A;  3ABO A;  4Z21 A;  1AII A;  1W3W A;  1BCY A;  1YCN A;  2R09 A;  2R0D A;  3ABQ A;  1N00 A;  2Q4C A;  3ANY A;  1YJ0 A;  1BC1 A;  1KU1 A;  2RAN A;  2K6X A;  2H0K A;  1AVC A;  2HYV A;  4HRE A;  1ALA A;  2QEZ A;  4EVF A;  4JWL A;  1RE0 B;  3BRX A;  1Q8D A;  1W7B A;  1XJL A;  3SOH B;  4JMO A;  1BCZ A;  4MDV A;  3TW5 A;  2OY9 A;  3AO0 A;  1BC0 A;  3USY A;  4FHR B;  4JXH A;  1W45 A;  4JMI A;  1HAK A;  1HVG A;  1G5N A;  1ANN A;  1AXN A;  1DM5 A;  4KN7 X;  1MCX A;  1XSZ A;  2XO3 A;  2ZOC A;  2IIC A;  1BO9 A;  1I4A A;  4L5M A;  2ZHI A;  4MDU A;  2HYW A;  2VXG A;  1ANW A;  1A8B A;  1HM6 A;  4D7R A;  1BC3 A;  3USW A;  1UPT B;  1ANX A;  1HVD A;  4FQ0 C;  1YII A;  1R8S E;  3ABR A;  3LTL A;  4EVH A;  1PBV A;  4A4P A;  3ABS A;  1R8M E;  1XT0 B;  2XO2 A;  1AVR A;  1DK5 A;  1YGM A;  1A8A A;  1N44 A;  4D7Q A;  3L8N A;  1LKV X;  3HJL A;  2H0L A;  1R4A E;  4C0A A;  2ZHJ A;  4C7P A;  4OIY A;  1N41 A;  4Q2S A;  1R8Q E;  1QC7 A;  2HSN A;  2H0M A;  4JK1 X;  1HVF A;  1AOW A;  4KMU X;  1HVE A;  3AJC A;  2HYU A;  1N42 A;  1BCW A;  4X9P A;  1AEI A;  2IE6 A;  1BC9 A;  1M9I A;  2IE7 A;  1AVH A;  2II2 A;  1S9D E;  4KN4 X; 
#chains in the Genus database with same CATH homology
 2HYW A;  1N41 A;  1W7B A;  1ANW A;  1A8B A;  1XJL A;  1HM6 A;  1BC3 A;  1SAV A;  1BCZ A;  2H0M A;  1ANX A;  4MDV A;  1AII A;  1W3W A;  1BCY A;  1YCN A;  1HVD A;  1HVF A;  1AOW A;  1BC0 A;  1YII A;  1N00 A;  1W45 A;  1HAK A;  1HVG A;  2Q4C A;  1HVE A;  1G5N A;  1ANN A;  1AXN A;  4EVH A;  2HYU A;  1YJ0 A;  1DM5 A;  1BCW A;  1N42 A;  4X9P A;  1BC1 A;  1MCX A;  2RAN A;  1AEI A;  1AVR A;  2IE6 A;  2XO2 A;  1DK5 A;  2XO3 A;  2ZOC A;  1A8A A;  2H0K A;  1AVC A;  1M9I A;  1N44 A;  2HYV A;  2IE7 A;  1AVH A;  2II2 A;  2IIC A;  1I4A A;  4HRE A;  1BO9 A;  1ALA A;  2H0L A;  2ZHI A;  4EVF A;  2ZHJ A;  4MDU A;  3BRX A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...