The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
155
|
sequence length |
453
|
structure length |
439
|
Chain Sequence |
MILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKMTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLMSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHPTDDPDGILASLMEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQMEAMRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVMYFETGQGSFGVDQVTMEARCYGFAKKFDPFLVNTVVGFYDSKQVIRAGLEDHFMGKLTGISMGCDVCYTNHMADQNDVENLSVLLTAAGCNFIMGIPHGDDVMLNYQTTGYHETATLRELFGLKPIKEFDQWMEKMGFSENGKLTSRAGDASIFL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
publication title |
Crystal structure of ethanolamine ammonia-lyase heavy chain (YP_013784.1) from Listeria monocytogenes 4b F2365 at 2.15 A resolution
rcsb |
molecule tags |
Lyase
|
source organism |
Listeria monocytogenes serotype 4b
|
molecule keywords |
Ethanolamine ammonia-lyase heavy chain
|
total genus |
155
|
structure length |
439
|
sequence length |
453
|
chains with identical sequence |
B, C, D, E, F
|
ec nomenclature |
ec
4.3.1.7: Ethanolamine ammonia-lyase. |
pdb deposition date | 2007-06-26 |
cath code
| Class | Architecture | Topology | Homology | Domain |
---|---|---|---|---|---|
Mainly Alpha | Orthogonal Bundle | Annexin V; domain 1 | lyase | ||
Mainly Beta | Roll | Ribosomal Protein L24e; Chain: T; | ethanolamine ammonia-lyase heavy chain domain like | ||
Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I |