1BO9A

Nmr solution structure of domain 1 of human annexin i
Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
73
structure length
73
Chain Sequence
TFNPSSDVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLALLK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TIV1 (3-6)AH1 (6-16)TIV2 (17-20)TIV3 (21-24)AH2 (25-31)EMPTYTII'1 (61-64)AH5 (65-70)AH3 (34-48)AH4 (53-59)Updating...
connected with : NaN
molecule tags Metal transport
source organism Homo sapiens
publication title NMR solution structure of domain 1 of human annexin I shows an autonomous folding unit.
pubmed doi rcsb
molecule keywords PROTEIN (ANNEXIN I)
total genus 16
structure length 73
sequence length 73
ec nomenclature
pdb deposition date 1998-08-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1bo9A00
2RANA 1AVRA 2ZHIA 1G5NA 1ALAA 4MDUA 4HREA 1YJ0A 1W3WA 3BRXA 1ANWA 1YCNA 1BO9A 4X9PA 1HVEA 2H0LA 1ANNA 1HVFA 1DK5A 1BCWA 1W7BA 2IE6A 1M9IA 1N42A 2XO3A 1N41A 4EVFA 1AXNA 1MCXA 1N00A 1AEIA 1AVCA 2ZOCA 1AIIA 4MDVA 1AOWA 1N44A 1BC1A 1HAKA 1HVGA 2H0KA 2HYVA 1XJLA 1HVDA 2HYUA 1BCYA 2H0MA 2II2A 1AVHA 1BCZA 1ANXA 1A8BA 1W45A 1YIIA 2Q4CA 2HYWA 1HM6A 2IICA 2IE7A 1A8AA 1BC3A 1DM5A 1I4AA 2XO2A 4EVHA 1SAVA 2ZHJA 1BC0A
chains in the Genus database with same CATH superfamily
1G5NA 1YJ0A 1W3WA 3BRXA 1YCNA 4KMUX 1HVEA 4Q2SA 1N42A 1N00A 1AVCA 2ZOCA 1N44A 2HYVA 1HAKA 3SOHB 1XJLA 3SWVA 4JMIA 4JXHA 4KN4X 2R09A 1KU1A 1A8BA 1W45A 2VXGA 3ABOA 3HJLA 1DM5A 1I4AA 1SAVA 1YGMA 3USWA 2ZHIA 1AVRA 2HSNA 4MDUA 1BO9A 2H0LA 1ANNA 2K6XA 1DK5A 4FQ0C 3ABSA 1AXNA 1C1KA 4C7PA 1QC7A 1HVGA 2H0MA 1BC9A 2II2A 1R8SE 3TW5A 4L5MA 2IICA 4JK1X 4EVHA 1BC0A 1ALAA 1RE0B 4KN7X 1LKVX 1R8ME 1W7BA 2IE6A 3LTLA 2XO3A 1XSZA 1XT0B 4MDVA 1AOWA 4JMOA 1BC1A 2H0KA 2OY9A 1R8QE 1HVDA 2HYUA 1Q8DA 1YIIA 2Q4CA 1S9DE 2HYWA 4D7QA 3AJCA 1BC3A 4JWLA 1PBVA 3AO0A 4Z21A 2QEZA 2RANA 4HREA 1ANWA 4A4PA 4X9PA 1HVFA 4OIYA 4D7RA 1BCWA 1M9IA 1N41A 4FHRB 4EVFA 1MCXA 3ANYA 1AEIA 1AIIA 1UPTB 3L8NA 3USYA 1BCYA 1AVHA 1ANXA 4C0AA 3ABRA 2R0DA 3ABQA 1HM6A 2IE7A 1A8AA 2XO2A 1R4AE 2ZHJA 1BCZA
chains in the Genus database with same CATH topology
2RANA 1AVRA 2ZHIA 1G5NA 1ALAA 4MDUA 4HREA 1YJ0A 1W3WA 3BRXA 1ANWA 1YCNA 1BO9A 4X9PA 1HVEA 2H0LA 1ANNA 1HVFA 1DK5A 1BCWA 1W7BA 2IE6A 1M9IA 1N42A 2XO3A 1N41A 4EVFA 1AXNA 1MCXA 1N00A 1AEIA 1AVCA 2ZOCA 1AIIA 4MDVA 1AOWA 1N44A 1BC1A 1HAKA 1HVGA 2H0KA 2HYVA 1XJLA 1HVDA 2HYUA 1BCYA 2H0MA 2II2A 1AVHA 1BCZA 1ANXA 1A8BA 1W45A 1YIIA 2Q4CA 2HYWA 1HM6A 2IICA 2IE7A 1A8AA 1BC3A 1DM5A 1I4AA 2XO2A 4EVHA 1SAVA 2ZHJA 1BC0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RAN A;  1AVR A;  2ZHI A;  1G5N A;  1ALA A;  4MDU A;  4HRE A;  1YJ0 A;  1W3W A;  3BRX A;  1ANW A;  1YCN A;  1BO9 A;  4X9P A;  1HVE A;  2H0L A;  1ANN A;  1HVF A;  1DK5 A;  1BCW A;  1W7B A;  2IE6 A;  1M9I A;  1N42 A;  2XO3 A;  1N41 A;  4EVF A;  1AXN A;  1MCX A;  1N00 A;  1AEI A;  1AVC A;  2ZOC A;  1AII A;  4MDV A;  1AOW A;  1N44 A;  1BC1 A;  1HAK A;  1HVG A;  2H0K A;  2HYV A;  1XJL A;  1HVD A;  2HYU A;  1BCY A;  2H0M A;  2II2 A;  1AVH A;  1BCZ A;  1ANX A;  1A8B A;  1W45 A;  1YII A;  2Q4C A;  2HYW A;  1HM6 A;  2IIC A;  2IE7 A;  1A8A A;  1BC3 A;  1DM5 A;  1I4A A;  2XO2 A;  4EVH A;  1SAV A;  2ZHJ A;  1BC0 A; 
#chains in the Genus database with same CATH topology
 1G5N A;  1YJ0 A;  1W3W A;  3BRX A;  1YCN A;  4KMU X;  1HVE A;  4Q2S A;  1N42 A;  1N00 A;  1AVC A;  2ZOC A;  1N44 A;  2HYV A;  1HAK A;  3SOH B;  1XJL A;  3SWV A;  4JMI A;  4JXH A;  4KN4 X;  2R09 A;  1KU1 A;  1A8B A;  1W45 A;  2VXG A;  3ABO A;  3HJL A;  1DM5 A;  1I4A A;  1SAV A;  1YGM A;  3USW A;  2ZHI A;  1AVR A;  2HSN A;  4MDU A;  1BO9 A;  2H0L A;  1ANN A;  2K6X A;  1DK5 A;  4FQ0 C;  3ABS A;  1AXN A;  1C1K A;  4C7P A;  1QC7 A;  1HVG A;  2H0M A;  1BC9 A;  2II2 A;  1R8S E;  3TW5 A;  4L5M A;  2IIC A;  4JK1 X;  4EVH A;  1BC0 A;  1ALA A;  1RE0 B;  4KN7 X;  1LKV X;  1R8M E;  1W7B A;  2IE6 A;  3LTL A;  2XO3 A;  1XSZ A;  1XT0 B;  4MDV A;  1AOW A;  4JMO A;  1BC1 A;  2H0K A;  2OY9 A;  1R8Q E;  1HVD A;  2HYU A;  1Q8D A;  1YII A;  2Q4C A;  1S9D E;  2HYW A;  4D7Q A;  3AJC A;  1BC3 A;  4JWL A;  1PBV A;  3AO0 A;  4Z21 A;  2QEZ A;  2RAN A;  4HRE A;  1ANW A;  4A4P A;  4X9P A;  1HVF A;  4OIY A;  4D7R A;  1BCW A;  1M9I A;  1N41 A;  4FHR B;  4EVF A;  1MCX A;  3ANY A;  1AEI A;  1AII A;  1UPT B;  3L8N A;  3USY A;  1BCY A;  1AVH A;  1ANX A;  4C0A A;  3ABR A;  2R0D A;  3ABQ A;  1HM6 A;  2IE7 A;  1A8A A;  2XO2 A;  1R4A E;  2ZHJ A;  1BCZ A; 
#chains in the Genus database with same CATH homology
 2RAN A;  1AVR A;  2ZHI A;  1G5N A;  1ALA A;  4MDU A;  4HRE A;  1YJ0 A;  1W3W A;  3BRX A;  1ANW A;  1YCN A;  1BO9 A;  4X9P A;  1HVE A;  2H0L A;  1ANN A;  1HVF A;  1DK5 A;  1BCW A;  1W7B A;  2IE6 A;  1M9I A;  1N42 A;  2XO3 A;  1N41 A;  4EVF A;  1AXN A;  1MCX A;  1N00 A;  1AEI A;  1AVC A;  2ZOC A;  1AII A;  4MDV A;  1AOW A;  1N44 A;  1BC1 A;  1HAK A;  1HVG A;  2H0K A;  2HYV A;  1XJL A;  1HVD A;  2HYU A;  1BCY A;  2H0M A;  2II2 A;  1AVH A;  1BCZ A;  1ANX A;  1A8B A;  1W45 A;  1YII A;  2Q4C A;  2HYW A;  1HM6 A;  2IIC A;  2IE7 A;  1A8A A;  1BC3 A;  1DM5 A;  1I4A A;  2XO2 A;  4EVH A;  1SAV A;  2ZHJ A;  1BC0 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.