2HYVA

Human annexin a2 with heparin hexasaccharide bound
Total Genus 131

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
308
structure length
308
Chain Sequence
NFDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD
5010015020025030030025020015010050
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTII1 (47-50)AH1 (34-46)AH16 (265-277)AH2 (52-60)AH3 (64-78)AH4 (82-89)AH15 (249-263)AH7 (124-133)TI2 (232-235)AH6 (105-117)TIV2 (121-124)TII'1 (118-121)TIV1 (117-120)AH11 (187-200)AH9 (154-161)TI1 (201-204)AH10 (164-175)TVIII1 (182-185)AH13 (221-232)TIV3 (200-203)TIV4 (204-207)AH12 (209-218)TVIII2 (235-238)AH14 (239-246)AH17 (284-295)TIV5 (295-298)AH18 (299-310)AH5 (92-102)AH8 (136-150)Updating...
connected with : NaN
molecule tags Metal binding protein
source organism Homo sapiens
publication title Crystallographic analysis of calcium-dependent heparin binding to annexin A2.
pubmed doi rcsb
molecule keywords Annexin A2
total genus 131
structure length 308
sequence length 308
ec nomenclature
pdb deposition date 2006-08-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2hyvA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2hyvA01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2hyvA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 2hyvA03
2H0MA 1AOWA 1YJ0A 1M9IA 2ZHJA 1N42A 2XO3A 2H0LA 3BRXA 1MCXA 1ANNA 1SAVA 1BCYA 2HYWA 4MDVA 1AVHA 2ZOCA 1BCZA 4EVHA 2IE6A 4EVFA 1HAKA 1N00A 2H0KA 1XJLA 1DM5A 1A8BA 1BC1A 1HVGA 1ANWA 1AVCA 1N44A 1G5NA 1AEIA 1DK5A 1BC0A 1W3WA 1W7BA 2HYVA 2IE7A 2XO2A 1BC3A 2IICA 1I4AA 2Q4CA 1YCNA 1A8AA 1YIIA 1N41A 2II2A 1AXNA 4X9PA 1HVDA 2HYUA 2ZHIA 2RANA 1BO9A 1HM6A 1ANXA 1AIIA 1HVEA 4MDUA 1ALAA 4HREA 1W45A 1BCWA 1HVFA 1AVRA
chains in the Genus database with same CATH superfamily
3ABRA 4JMOA 3USYA 3ABQA 1BCYA 4MDVA 4EVFA 1HAKA 1A8BA 1AVCA 2HYVA 2XO2A 1BC0A 3AJCA 1XT0B 2IICA 1UPTB 1N41A 1AXNA 2ZHIA 4KMUX 1HM6A 3L8NA 1RE0B 1QC7A 3ABOA 1R4AE 2H0MA 4KN7X 2ZHJA 4C0AA 1N42A 3BRXA 1MCXA 3USWA 1BCZA 3HJLA 4EVHA 2IE6A 1R8ME 2H0KA 1YGMA 1AEIA 1W7BA 3ABSA 1LKVX 4D7QA 2II2A 1A8AA 4Z21A 1KU1A 2HYUA 2RANA 1HVEA 4HREA 4JXHA 4JMIA 1C1KA 4D7RA 4Q2SA 1BCWA 1HVFA 3LTLA 2XO3A 2H0LA 2QEZA 1SAVA 2HYWA 1AVHA 1BC9A 2HSNA 3SOHB 1DM5A 1BC1A 1HVGA 2IE7A 2R0DA 3TW5A 4JK1X 2OY9A 1I4AA 2Q4CA 1YCNA 1YIIA 4FHRB 4X9PA 1HVDA 1BO9A 1ANXA 1AIIA 4KN4X 4MDUA 4C7PA 4OIYA 4FQ0C 1AVRA 3ANYA 1AOWA 1YJ0A 1M9IA 1ANNA 3AO0A 2ZOCA 1N00A 4A4PA 1XJLA 1ANWA 1N44A 1W3WA 1G5NA 1DK5A 1PBVA 2VXGA 1BC3A 1XSZA 4JWLA 4L5MA 3SWVA 2R09A 1S9DE 1ALAA 1R8SE 1W45A 1Q8DA 1R8QE 2K6XA
chains in the Genus database with same CATH topology
2H0MA 1AOWA 1YJ0A 1M9IA 2ZHJA 1N42A 2XO3A 2H0LA 3BRXA 1MCXA 1ANNA 1SAVA 1BCYA 2HYWA 4MDVA 1AVHA 2ZOCA 1BCZA 4EVHA 2IE6A 4EVFA 1HAKA 1N00A 2H0KA 1XJLA 1DM5A 1A8BA 1BC1A 1HVGA 1ANWA 1AVCA 1N44A 1G5NA 1AEIA 1DK5A 1BC0A 1W3WA 1W7BA 2HYVA 2IE7A 2XO2A 1BC3A 2IICA 1I4AA 2Q4CA 1YCNA 1A8AA 1YIIA 1N41A 2II2A 1AXNA 4X9PA 1HVDA 2HYUA 2ZHIA 2RANA 1BO9A 1HM6A 1ANXA 1AIIA 1HVEA 4MDUA 1ALAA 4HREA 1W45A 1BCWA 1HVFA 1AVRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H0M A;  1AOW A;  1YJ0 A;  1M9I A;  2ZHJ A;  1N42 A;  2XO3 A;  2H0L A;  3BRX A;  1MCX A;  1ANN A;  1SAV A;  1BCY A;  2HYW A;  4MDV A;  1AVH A;  2ZOC A;  1BCZ A;  4EVH A;  2IE6 A;  4EVF A;  1HAK A;  1N00 A;  2H0K A;  1XJL A;  1DM5 A;  1A8B A;  1BC1 A;  1HVG A;  1ANW A;  1AVC A;  1N44 A;  1G5N A;  1AEI A;  1DK5 A;  1BC0 A;  1W3W A;  1W7B A;  2HYV A;  2IE7 A;  2XO2 A;  1BC3 A;  2IIC A;  1I4A A;  2Q4C A;  1YCN A;  1A8A A;  1YII A;  1N41 A;  2II2 A;  1AXN A;  4X9P A;  1HVD A;  2HYU A;  2ZHI A;  2RAN A;  1BO9 A;  1HM6 A;  1ANX A;  1AII A;  1HVE A;  4MDU A;  1ALA A;  4HRE A;  1W45 A;  1BCW A;  1HVF A;  1AVR A; 
#chains in the Genus database with same CATH topology
 3ABR A;  4JMO A;  3USY A;  3ABQ A;  1BCY A;  4MDV A;  4EVF A;  1HAK A;  1A8B A;  1AVC A;  2HYV A;  2XO2 A;  1BC0 A;  3AJC A;  1XT0 B;  2IIC A;  1UPT B;  1N41 A;  1AXN A;  2ZHI A;  4KMU X;  1HM6 A;  3L8N A;  1RE0 B;  1QC7 A;  3ABO A;  1R4A E;  2H0M A;  4KN7 X;  2ZHJ A;  4C0A A;  1N42 A;  3BRX A;  1MCX A;  3USW A;  1BCZ A;  3HJL A;  4EVH A;  2IE6 A;  1R8M E;  2H0K A;  1YGM A;  1AEI A;  1W7B A;  3ABS A;  1LKV X;  4D7Q A;  2II2 A;  1A8A A;  4Z21 A;  1KU1 A;  2HYU A;  2RAN A;  1HVE A;  4HRE A;  4JXH A;  4JMI A;  1C1K A;  4D7R A;  4Q2S A;  1BCW A;  1HVF A;  3LTL A;  2XO3 A;  2H0L A;  2QEZ A;  1SAV A;  2HYW A;  1AVH A;  1BC9 A;  2HSN A;  3SOH B;  1DM5 A;  1BC1 A;  1HVG A;  2IE7 A;  2R0D A;  3TW5 A;  4JK1 X;  2OY9 A;  1I4A A;  2Q4C A;  1YCN A;  1YII A;  4FHR B;  4X9P A;  1HVD A;  1BO9 A;  1ANX A;  1AII A;  4KN4 X;  4MDU A;  4C7P A;  4OIY A;  4FQ0 C;  1AVR A;  3ANY A;  1AOW A;  1YJ0 A;  1M9I A;  1ANN A;  3AO0 A;  2ZOC A;  1N00 A;  4A4P A;  1XJL A;  1ANW A;  1N44 A;  1W3W A;  1G5N A;  1DK5 A;  1PBV A;  2VXG A;  1BC3 A;  1XSZ A;  4JWL A;  4L5M A;  3SWV A;  2R09 A;  1S9D E;  1ALA A;  1R8S E;  1W45 A;  1Q8D A;  1R8Q E;  2K6X A; 
#chains in the Genus database with same CATH homology
 2H0M A;  1AOW A;  1YJ0 A;  1M9I A;  2ZHJ A;  1N42 A;  2XO3 A;  2H0L A;  3BRX A;  1MCX A;  1ANN A;  1SAV A;  1BCY A;  2HYW A;  4MDV A;  1AVH A;  2ZOC A;  1BCZ A;  4EVH A;  2IE6 A;  4EVF A;  1HAK A;  1N00 A;  2H0K A;  1XJL A;  1DM5 A;  1A8B A;  1BC1 A;  1HVG A;  1ANW A;  1AVC A;  1N44 A;  1G5N A;  1AEI A;  1DK5 A;  1BC0 A;  1W3W A;  1W7B A;  2HYV A;  2IE7 A;  2XO2 A;  1BC3 A;  2IIC A;  1I4A A;  2Q4C A;  1YCN A;  1A8A A;  1YII A;  1N41 A;  2II2 A;  1AXN A;  4X9P A;  1HVD A;  2HYU A;  2ZHI A;  2RAN A;  1BO9 A;  1HM6 A;  1ANX A;  1AII A;  1HVE A;  4MDU A;  1ALA A;  4HRE A;  1W45 A;  1BCW A;  1HVF A;  1AVR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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