3LN7A

Crystal structure of a bifunctional glutathione synthetase from pasteurella multocida
Total Genus 166
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
166
sequence length
755
structure length
747
Chain Sequence
KIQHIIHENQLGLLFQQGSFGLEKESQRVTADGAIVTTPHPAVFGNRRYHPYIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLPEEEYIFPLSMPAGLPAIRVAQLDNPEDVAYREYLVKIYGKNKQMVSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPTYFKDGSPLAKGQFVRSLRSSQYGYVNDPEINVSFDSVEKYVESLEHWVSTKLIAEKEFYSNVRLRGAKKAREFLTTGIQYLEFRLFDLNPFEIYGISLKDAKFIHVFALFMIWMDHTADQEEVELGKARLAEVAFEHPLEKTAYAVEGELVLLELLSMLEQIGAEPELFEIVKEKLTQFTDPSKTVAGRLVRAIEQAGSDQQLGAQLAQQYKAQAFERFYALSAFDNMELSTQALLFDVIQKGIHTEILDENDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQSVEFTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFREDKEVMVEDYLVGTEYRFFVLGDETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGAAVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHIFPYAGKSRRLTQNVIKMLFPEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structures of two bifunctional gamma-Glutamate-cysteine Ligase/Glutathione synthetases (GshF) reveal a novel hybrid ATP-grasp fold
rcsb
source organism Pasteurella multocida
molecule tags Ligase
molecule keywords Glutathione biosynthesis bifunctional protein gshAB
total genus 166
structure length 747
sequence length 755
chains with identical sequence B
ec nomenclature ec 6.3.2.2: Glutamate--cysteine ligase.
pdb deposition date 2010-02-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02655 ATP-grasp_3 ATP-grasp domain
A PF04262 Glu_cys_ligase Glutamate-cysteine ligase
A PF18419 ATP-grasp_6 ATP-grasp-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.590.20 Alpha Beta 2-Layer Sandwich Creatine Kinase; Chain A, domain 2 Creatine Kinase; Chain A, domain 2 3ln7A01
1V4GA 2GWDA 1VA6A 3LN7A 3LN6A 3NZTA 2D32A 1TT4A 2GWCA 2D33A 1R8GA
chains in the Genus database with same CATH superfamily
1V4GA 1F52A 3B6RA 2J1QA 1SD0A 2GWCA 3LVWA 4BG4A 1U6RA 4LNOA 3ZXRA 2CRKA 3FKYA 3M10A 4BHLA 1M15A 4HPPA 4LNIA 4LNNA 3JPZA 2D32A 3ZXVA 4RF6A 4Z9MA 1FPYA 2UU7A 3LN6A 5J9AA 1LGRA 2LGSA 4BAXA 1R8GA 1BG0A 1CRKA 2D3CA 3IG8A 2D3AA 2QC8A 3DREA 2D33A 2OJWA 4AM1A 2BVCA 4GW0A 1RL9A 1TT4A 4GVYA 1P50A 2D3BA 4RF9A 4LNFA 3JU6A 1VA6A 3LN7A 3NG0A 4S0RA 3L2EB 1VRPA 4LNKA 3L2DA 4GVZA 1QH4A 2WHIA 2GWDA 4ACFA 3JU5A 3NZTA 1I0EA 5J99A 1HTQA 1P52A 4GW2A 4BG4B 4S17A 4RF7A 3LVVA 4RF8A 4XYCA 1G0WA 1HTOA 1F1HA 1QK1A 2GLSA 3DRBA 3IG5A 4Q2RA 3JQ3A 2WGSA 3L2EA
chains in the Genus database with same CATH topology
1V4GA 2QC8A 2GWDA 3NZTA 2GWCA 2OJWA 2D33A 3LVWA 2UU7A 3LN6A 1TT4A 3LVVA 2D3BA 3FKYA 1VA6A 3LN7A 4BAXA 1R8GA 3IG5A 2D3CA 2D32A 3IG8A 2D3AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1V4G A;  2GWD A;  1VA6 A;  3LN7 A;  3LN6 A;  3NZT A;  2D32 A;  1TT4 A;  2GWC A;  2D33 A;  1R8G A; 
#chains in the Genus database with same CATH topology
 1V4G A;  1F52 A;  3B6R A;  2J1Q A;  1SD0 A;  2GWC A;  3LVW A;  4BG4 A;  1U6R A;  4LNO A;  3ZXR A;  2CRK A;  3FKY A;  3M10 A;  4BHL A;  1M15 A;  4HPP A;  4LNI A;  4LNN A;  3JPZ A;  2D32 A;  3ZXV A;  4RF6 A;  4Z9M A;  1FPY A;  2UU7 A;  3LN6 A;  5J9A A;  1LGR A;  2LGS A;  4BAX A;  1R8G A;  1BG0 A;  1CRK A;  2D3C A;  3IG8 A;  2D3A A;  2QC8 A;  3DRE A;  2D33 A;  2OJW A;  4AM1 A;  2BVC A;  4GW0 A;  1RL9 A;  1TT4 A;  4GVY A;  1P50 A;  2D3B A;  4RF9 A;  4LNF A;  3JU6 A;  1VA6 A;  3LN7 A;  3NG0 A;  4S0R A;  3L2E B;  1VRP A;  4LNK A;  3L2D A;  4GVZ A;  1QH4 A;  2WHI A;  2GWD A;  4ACF A;  3JU5 A;  3NZT A;  1I0E A;  5J99 A;  1HTQ A;  1P52 A;  4GW2 A;  4BG4 B;  4S17 A;  4RF7 A;  3LVV A;  4RF8 A;  4XYC A;  1G0W A;  1HTO A;  1F1H A;  1QK1 A;  2GLS A;  3DRB A;  3IG5 A;  4Q2R A;  3JQ3 A;  2WGS A;  3L2E A; 
#chains in the Genus database with same CATH homology
 1V4G A;  2QC8 A;  2GWD A;  3NZT A;  2GWC A;  2OJW A;  2D33 A;  3LVW A;  2UU7 A;  3LN6 A;  1TT4 A;  3LVV A;  2D3B A;  3FKY A;  1VA6 A;  3LN7 A;  4BAX A;  1R8G A;  3IG5 A;  2D3C A;  2D32 A;  3IG8 A;  2D3A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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