3NZTA

2.0 angstrom crystal structure of glutamate--cysteine ligase (gsha) ftom francisella tularensis in complex with amp
Total Genus 190
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
190
sequence length
500
structure length
498
Chain Sequence
b'YDFKKINNLRGIERETLRVTDCGNLATSNHPDGLGHKLTNNSITVDFSENLLELITKPHDSIDKAIGELYQLSAFTLDNMHSDEIILNTSMPLSANDNDIQEADFGSSNSGRMKRVYRKGLSARYGKIMQIISGIHYNFSFDKDLISNIATNKQVSISDIYFDVLNNYFEFMWLLPYLFGASPICAKTSVKNKPDYLSVLDDKFYVGEYATSLRMSDLGSPAQKDLAISYDNVKAYVKDLIQATDDTFADYKRIGLYNSQGQRIQLNDGILQIENEYYSAIRPKQIAKRGERPACALYNRGVEYVEVRVLDVDPFEPVGISKDTALFVEVMLMTCLDKDAKKYHKDIIKQAKQNLTAVAIQGRNPQLKLKKLDDDSEILLKDYALELFDEIEAVAKKMPKEYLDAVEIQKRKVLDISQTPSAKIIELARQHGYKKFILDISRRVSQQFRSYELPAAIVAKLKDQAGQSVAAEKELVANDKISLDEYINRYYKSSKGCC'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Glutamate--cysteine ligase
publication title 2.0 Angstrom Crystal structure of Glutamate--Cysteine Ligase (gshA) ftom Francisella tularensis in Complex with AMP.
rcsb
source organism Francisella tularensis subsp. tularensis
molecule tags Ligase
total genus 190
structure length 498
sequence length 500
ec nomenclature ec 6.3.2.2: Glutamate--cysteine ligase.
pdb deposition date 2010-07-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04262 Glu_cys_ligase Glutamate-cysteine ligase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.590.20 Alpha Beta 2-Layer Sandwich Creatine Kinase; Chain A, domain 2 Creatine Kinase; Chain A, domain 2 3nztA00
2GWCA 1R8GA 2D33A 1VA6A 3LN7A 1TT4A 1V4GA 3LN6A 2D32A 2GWDA 3NZTA
chains in the Genus database with same CATH superfamily
3DREA 2CRKA 2LGSA 3IG8A 1HTOA 4LNNA 1U6RA 4RF7A 2GLSA 3L2EA 4LNOA 2J1QA 2D3BA 3JU5A 1R8GA 2D3CA 4S0RA 3L2DA 3JQ3A 1SD0A 2WHIA 2GWDA 4GW0A 4LNKA 1F1HA 1V4GA 1P50A 2UU7A 4BG4B 3NZTA 2D3AA 3DRBA 3L2EB 3LN7A 1CRKA 1I0EA 3ZXRA 3JPZA 1BG0A 5J99A 2GWCA 4LNFA 4BAXA 1F52A 2WGSA 1QH4A 3M10A 2QC8A 1LGRA 3LN6A 3IG5A 4GVYA 4RF9A 5J9AA 4ACFA 4GVZA 4Z9MA 3NG0A 3JU6A 4HPPA 4S17A 1M15A 1HTQA 1P52A 2D33A 4BG4A 4AM1A 4RF6A 2OJWA 4Q2RA 3B6RA 4XYCA 1VA6A 1VRPA 2D32A 2BVCA 4RF8A 1RL9A 1FPYA 3FKYA 4LNIA 3LVWA 4BHLA 1TT4A 4GW2A 1G0WA 3ZXVA 3LVVA 1QK1A
chains in the Genus database with same CATH topology
2D33A 1V4GA 3IG8A 2OJWA 1VA6A 2QC8A 2UU7A 3LN6A 2D32A 2D3BA 3NZTA 2D3AA 3IG5A 1R8GA 3LN7A 2D3CA 3FKYA 2GWCA 3LVWA 1TT4A 4BAXA 2GWDA 3LVVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GWC A;  1R8G A;  2D33 A;  1VA6 A;  3LN7 A;  1TT4 A;  1V4G A;  3LN6 A;  2D32 A;  2GWD A;  3NZT A; 
#chains in the Genus database with same CATH topology
 3DRE A;  2CRK A;  2LGS A;  3IG8 A;  1HTO A;  4LNN A;  1U6R A;  4RF7 A;  2GLS A;  3L2E A;  4LNO A;  2J1Q A;  2D3B A;  3JU5 A;  1R8G A;  2D3C A;  4S0R A;  3L2D A;  3JQ3 A;  1SD0 A;  2WHI A;  2GWD A;  4GW0 A;  4LNK A;  1F1H A;  1V4G A;  1P50 A;  2UU7 A;  4BG4 B;  3NZT A;  2D3A A;  3DRB A;  3L2E B;  3LN7 A;  1CRK A;  1I0E A;  3ZXR A;  3JPZ A;  1BG0 A;  5J99 A;  2GWC A;  4LNF A;  4BAX A;  1F52 A;  2WGS A;  1QH4 A;  3M10 A;  2QC8 A;  1LGR A;  3LN6 A;  3IG5 A;  4GVY A;  4RF9 A;  5J9A A;  4ACF A;  4GVZ A;  4Z9M A;  3NG0 A;  3JU6 A;  4HPP A;  4S17 A;  1M15 A;  1HTQ A;  1P52 A;  2D33 A;  4BG4 A;  4AM1 A;  4RF6 A;  2OJW A;  4Q2R A;  3B6R A;  4XYC A;  1VA6 A;  1VRP A;  2D32 A;  2BVC A;  4RF8 A;  1RL9 A;  1FPY A;  3FKY A;  4LNI A;  3LVW A;  4BHL A;  1TT4 A;  4GW2 A;  1G0W A;  3ZXV A;  3LVV A;  1QK1 A; 
#chains in the Genus database with same CATH homology
 2D33 A;  1V4G A;  3IG8 A;  2OJW A;  1VA6 A;  2QC8 A;  2UU7 A;  3LN6 A;  2D32 A;  2D3B A;  3NZT A;  2D3A A;  3IG5 A;  1R8G A;  3LN7 A;  2D3C A;  3FKY A;  2GWC A;  3LVW A;  1TT4 A;  4BAX A;  2GWD A;  3LVV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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