3SLEC

Crystal structure of the p107c-maug/pre-methylamine dehydrogenase complex
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
129
structure length
128
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKASHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Methylamine utilization protein MauG
publication title Proline 107 is a major determinant in maintaining the structure of the distal pocket and reactivity of the high-spin heme of MauG.
pubmed doi rcsb
source organism Paracoccus denitrificans
molecule tags Oxidoreductase/electron transport
total genus 31
structure length 128
sequence length 129
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2011-06-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 3sleC00
2J55L 2HKRD 2IUPD 2I0TD 3PXWC 2IUQD 3PXSC 3RN0C 2AH0D 2AGWD 1MG2B 4K3IC 2AH1D 3L4OC 3SXTC 2AGZD 4L3GC 4FA4C 2OK4D 4L3HC 3RLMC 2I0SD 3SJLC 2AGYD 3C75L 3RMZC 4FB1C 4FAVC 2AGLD 2OIZD 3ORVC 1MDAL 1MAEL 2H3XB 4FANC 2IAAB 2GC4B 2IURD 3SLEC 4FA9C 4Y5RC 2IUVD 2J56L 2AGXD 2HKMD 2OJYD 4O1QC 4L1QC 3L4MC 3SWSC 2MTAL 4FA5C 4FA1C 1MG3B 2H47B 2MADL 2HJBD 2GC7B 2OK6D 2HJ4D 3RN1C 3SVWC 2Q7QD 2I0RD 3PXTC 2BBKL 2J57K 2HXCD 1MAFL
chains in the Genus database with same CATH superfamily
2J55L 2HKRD 2IUPD 2I0TD 3PXWC 2IUQD 3PXSC 3RN0C 2AH0D 2AGWD 1MG2B 4K3IC 2AH1D 3L4OC 3SXTC 2AGZD 4L3GC 4FA4C 2OK4D 4L3HC 3RLMC 2I0SD 3SJLC 2AGYD 3C75L 3RMZC 4FB1C 4FAVC 2AGLD 2OIZD 3ORVC 1MDAL 1MAEL 2H3XB 4FANC 2IAAB 2GC4B 2IURD 3SLEC 4FA9C 4Y5RC 2IUVD 2J56L 2AGXD 2HKMD 2OJYD 4O1QC 4L1QC 3L4MC 3SWSC 2MTAL 4FA5C 4FA1C 1MG3B 2H47B 2MADL 2HJBD 2GC7B 2OK6D 2HJ4D 3RN1C 3SVWC 2Q7QD 2I0RD 3PXTC 2BBKL 2J57K 2HXCD 1MAFL
chains in the Genus database with same CATH topology
2J55L 2HKRD 2IUPD 2I0TD 3PXWC 2IUQD 3PXSC 3RN0C 2AH0D 2AGWD 1MG2B 4K3IC 2AH1D 3L4OC 3SXTC 2AGZD 4L3GC 4FA4C 2OK4D 4L3HC 3RLMC 2I0SD 3SJLC 2AGYD 3C75L 3RMZC 4FB1C 4FAVC 2AGLD 2OIZD 3ORVC 1MDAL 1MAEL 2H3XB 4FANC 2IAAB 2GC4B 2IURD 3SLEC 4FA9C 4Y5RC 2IUVD 2J56L 2AGXD 2HKMD 2OJYD 4O1QC 4L1QC 3L4MC 3SWSC 2MTAL 4FA5C 4FA1C 1MG3B 2H47B 2MADL 2HJBD 2GC7B 2OK6D 2HJ4D 3RN1C 3SVWC 2Q7QD 2I0RD 3PXTC 2BBKL 2J57K 2HXCD 1MAFL
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2J55 L;  2HKR D;  2IUP D;  2I0T D;  3PXW C;  2IUQ D;  3PXS C;  3RN0 C;  2AH0 D;  2AGW D;  1MG2 B;  4K3I C;  2AH1 D;  3L4O C;  3SXT C;  2AGZ D;  4L3G C;  4FA4 C;  2OK4 D;  4L3H C;  3RLM C;  2I0S D;  3SJL C;  2AGY D;  3C75 L;  3RMZ C;  4FB1 C;  4FAV C;  2AGL D;  2OIZ D;  3ORV C;  1MDA L;  1MAE L;  2H3X B;  4FAN C;  2IAA B;  2GC4 B;  2IUR D;  3SLE C;  4FA9 C;  4Y5R C;  2IUV D;  2J56 L;  2AGX D;  2HKM D;  2OJY D;  4O1Q C;  4L1Q C;  3L4M C;  3SWS C;  2MTA L;  4FA5 C;  4FA1 C;  1MG3 B;  2H47 B;  2MAD L;  2HJB D;  2GC7 B;  2OK6 D;  2HJ4 D;  3RN1 C;  3SVW C;  2Q7Q D;  2I0R D;  3PXT C;  2BBK L;  2J57 K;  2HXC D;  1MAF L; 
#chains in the Genus database with same CATH topology
 2J55 L;  2HKR D;  2IUP D;  2I0T D;  3PXW C;  2IUQ D;  3PXS C;  3RN0 C;  2AH0 D;  2AGW D;  1MG2 B;  4K3I C;  2AH1 D;  3L4O C;  3SXT C;  2AGZ D;  4L3G C;  4FA4 C;  2OK4 D;  4L3H C;  3RLM C;  2I0S D;  3SJL C;  2AGY D;  3C75 L;  3RMZ C;  4FB1 C;  4FAV C;  2AGL D;  2OIZ D;  3ORV C;  1MDA L;  1MAE L;  2H3X B;  4FAN C;  2IAA B;  2GC4 B;  2IUR D;  3SLE C;  4FA9 C;  4Y5R C;  2IUV D;  2J56 L;  2AGX D;  2HKM D;  2OJY D;  4O1Q C;  4L1Q C;  3L4M C;  3SWS C;  2MTA L;  4FA5 C;  4FA1 C;  1MG3 B;  2H47 B;  2MAD L;  2HJB D;  2GC7 B;  2OK6 D;  2HJ4 D;  3RN1 C;  3SVW C;  2Q7Q D;  2I0R D;  3PXT C;  2BBK L;  2J57 K;  2HXC D;  1MAF L; 
#chains in the Genus database with same CATH homology
 2J55 L;  2HKR D;  2IUP D;  2I0T D;  3PXW C;  2IUQ D;  3PXS C;  3RN0 C;  2AH0 D;  2AGW D;  1MG2 B;  4K3I C;  2AH1 D;  3L4O C;  3SXT C;  2AGZ D;  4L3G C;  4FA4 C;  2OK4 D;  4L3H C;  3RLM C;  2I0S D;  3SJL C;  2AGY D;  3C75 L;  3RMZ C;  4FB1 C;  4FAV C;  2AGL D;  2OIZ D;  3ORV C;  1MDA L;  1MAE L;  2H3X B;  4FAN C;  2IAA B;  2GC4 B;  2IUR D;  3SLE C;  4FA9 C;  4Y5R C;  2IUV D;  2J56 L;  2AGX D;  2HKM D;  2OJY D;  4O1Q C;  4L1Q C;  3L4M C;  3SWS C;  2MTA L;  4FA5 C;  4FA1 C;  1MG3 B;  2H47 B;  2MAD L;  2HJB D;  2GC7 B;  2OK6 D;  2HJ4 D;  3RN1 C;  3SVW C;  2Q7Q D;  2I0R D;  3PXT C;  2BBK L;  2J57 K;  2HXC D;  1MAF L; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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