4FA5C

Crystal structure of wt maug in complex with pre-methylamine dehydrogenase aged 20 days
Total Genus 32
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
129
structure length
128
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKASHHHH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxidoreductase/electron transport
source organism Paracoccus denitrificans
publication title Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
molecule keywords Methylamine utilization protein MauG
total genus 32
structure length 128
sequence length 129
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2012-05-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 4fa5C00
3SVWC 2IUVD 3L4OC 2HJBD 3SWSC 2GC4B 1MG2B 1MDAL 2IUPD 3SXTC 2AGYD 2OK6D 4FB1C 2H3XB 3L4MC 3PXSC 2HKRD 2AGWD 2I0SD 2GC7B 4K3IC 3RLMC 3ORVC 2AGZD 2MADL 4Y5RC 2OIZD 3SLEC 2I0RD 3RMZC 3RN0C 2J55L 4FA4C 1MAEL 2AGLD 2AGXD 2AH1D 4L3HC 2HXCD 4FA9C 4O1QC 3C75L 4FAVC 2HJ4D 4L3GC 2AH0D 2HKMD 3PXTC 3SJLC 4FANC 1MG3B 2IURD 2OJYD 2IUQD 4FA1C 4L1QC 2BBKL 2H47B 2J57K 1MAFL 2OK4D 2Q7QD 3PXWC 3RN1C 2MTAL 4FA5C 2I0TD 2J56L 2IAAB
chains in the Genus database with same CATH superfamily
3SVWC 2IUVD 3L4OC 2HJBD 3SWSC 2GC4B 1MG2B 1MDAL 2IUPD 3SXTC 2AGYD 2OK6D 4FB1C 2H3XB 3L4MC 3PXSC 2HKRD 2AGWD 2I0SD 2GC7B 4K3IC 3RLMC 3ORVC 2AGZD 2MADL 4Y5RC 2OIZD 3SLEC 2I0RD 3RMZC 3RN0C 2J55L 4FA4C 1MAEL 2AGLD 2AGXD 2AH1D 4L3HC 2HXCD 4FA9C 4O1QC 3C75L 4FAVC 2HJ4D 4L3GC 2AH0D 2HKMD 3PXTC 3SJLC 4FANC 1MG3B 2IURD 2OJYD 2IUQD 4FA1C 4L1QC 2BBKL 2H47B 2J57K 1MAFL 2OK4D 2Q7QD 3PXWC 3RN1C 2MTAL 4FA5C 2I0TD 2J56L 2IAAB
chains in the Genus database with same CATH topology
3SVWC 2IUVD 3L4OC 2HJBD 3SWSC 2GC4B 1MG2B 1MDAL 2IUPD 3SXTC 2AGYD 2OK6D 4FB1C 2H3XB 3L4MC 3PXSC 2HKRD 2AGWD 2I0SD 2GC7B 4K3IC 3RLMC 3ORVC 2AGZD 2MADL 4Y5RC 2OIZD 3SLEC 2I0RD 3RMZC 3RN0C 2J55L 4FA4C 1MAEL 2AGLD 2AGXD 2AH1D 4L3HC 2HXCD 4FA9C 4O1QC 3C75L 4FAVC 2HJ4D 4L3GC 2AH0D 2HKMD 3PXTC 3SJLC 4FANC 1MG3B 2IURD 2OJYD 2IUQD 4FA1C 4L1QC 2BBKL 2H47B 2J57K 1MAFL 2OK4D 2Q7QD 3PXWC 3RN1C 2MTAL 4FA5C 2I0TD 2J56L 2IAAB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SVW C;  2IUV D;  3L4O C;  2HJB D;  3SWS C;  2GC4 B;  1MG2 B;  1MDA L;  2IUP D;  3SXT C;  2AGY D;  2OK6 D;  4FB1 C;  2H3X B;  3L4M C;  3PXS C;  2HKR D;  2AGW D;  2I0S D;  2GC7 B;  4K3I C;  3RLM C;  3ORV C;  2AGZ D;  2MAD L;  4Y5R C;  2OIZ D;  3SLE C;  2I0R D;  3RMZ C;  3RN0 C;  2J55 L;  4FA4 C;  1MAE L;  2AGL D;  2AGX D;  2AH1 D;  4L3H C;  2HXC D;  4FA9 C;  4O1Q C;  3C75 L;  4FAV C;  2HJ4 D;  4L3G C;  2AH0 D;  2HKM D;  3PXT C;  3SJL C;  4FAN C;  1MG3 B;  2IUR D;  2OJY D;  2IUQ D;  4FA1 C;  4L1Q C;  2BBK L;  2H47 B;  2J57 K;  1MAF L;  2OK4 D;  2Q7Q D;  3PXW C;  3RN1 C;  2MTA L;  4FA5 C;  2I0T D;  2J56 L;  2IAA B; 
#chains in the Genus database with same CATH topology
 3SVW C;  2IUV D;  3L4O C;  2HJB D;  3SWS C;  2GC4 B;  1MG2 B;  1MDA L;  2IUP D;  3SXT C;  2AGY D;  2OK6 D;  4FB1 C;  2H3X B;  3L4M C;  3PXS C;  2HKR D;  2AGW D;  2I0S D;  2GC7 B;  4K3I C;  3RLM C;  3ORV C;  2AGZ D;  2MAD L;  4Y5R C;  2OIZ D;  3SLE C;  2I0R D;  3RMZ C;  3RN0 C;  2J55 L;  4FA4 C;  1MAE L;  2AGL D;  2AGX D;  2AH1 D;  4L3H C;  2HXC D;  4FA9 C;  4O1Q C;  3C75 L;  4FAV C;  2HJ4 D;  4L3G C;  2AH0 D;  2HKM D;  3PXT C;  3SJL C;  4FAN C;  1MG3 B;  2IUR D;  2OJY D;  2IUQ D;  4FA1 C;  4L1Q C;  2BBK L;  2H47 B;  2J57 K;  1MAF L;  2OK4 D;  2Q7Q D;  3PXW C;  3RN1 C;  2MTA L;  4FA5 C;  2I0T D;  2J56 L;  2IAA B; 
#chains in the Genus database with same CATH homology
 3SVW C;  2IUV D;  3L4O C;  2HJB D;  3SWS C;  2GC4 B;  1MG2 B;  1MDA L;  2IUP D;  3SXT C;  2AGY D;  2OK6 D;  4FB1 C;  2H3X B;  3L4M C;  3PXS C;  2HKR D;  2AGW D;  2I0S D;  2GC7 B;  4K3I C;  3RLM C;  3ORV C;  2AGZ D;  2MAD L;  4Y5R C;  2OIZ D;  3SLE C;  2I0R D;  3RMZ C;  3RN0 C;  2J55 L;  4FA4 C;  1MAE L;  2AGL D;  2AGX D;  2AH1 D;  4L3H C;  2HXC D;  4FA9 C;  4O1Q C;  3C75 L;  4FAV C;  2HJ4 D;  4L3G C;  2AH0 D;  2HKM D;  3PXT C;  3SJL C;  4FAN C;  1MG3 B;  2IUR D;  2OJY D;  2IUQ D;  4FA1 C;  4L1Q C;  2BBK L;  2H47 B;  2J57 K;  1MAF L;  2OK4 D;  2Q7Q D;  3PXW C;  3RN1 C;  2MTA L;  4FA5 C;  2I0T D;  2J56 L;  2IAA B; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...