4FA1C

Crystal structure of wt maug in complex with pre-methylamine dehydrogenase aged 130 days.
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
Knots found
sequence length
125
structure length
124
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein MauG
publication title Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
source organism Paracoccus denitrificans
total genus 30
structure length 124
sequence length 125
chains with identical sequence E
other databases KnotProt 2.0: K
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2012-05-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 4fa1C00
2IUPD 2AH1D 2IUVD 2MTAL 2AH0D 2J57K 4L1QC 2AGLD 2HJ4D 3SLEC 2HXCD 2AGYD 4L3GC 2AGXD 2HKRD 2IUQD 2OIZD 3ORVC 3PXSC 4FA9C 2OJYD 3C75L 4FA1C 4FAVC 3L4MC 3PXWC 3SXTC 2I0RD 1MG3B 2IURD 4O1QC 3RLMC 1MAEL 1MG2B 2IAAB 2I0TD 2GC4B 2J55L 2MADL 4K3IC 3RN0C 2GC7B 3RN1C 4FANC 4FA5C 3SVWC 2H3XB 2AGZD 1MDAL 2Q7QD 2H47B 4Y5RC 3RMZC 4L3HC 3SJLC 2HJBD 2BBKL 1MAFL 2HKMD 4FA4C 3SWSC 2J56L 2OK4D 2AGWD 3PXTC 3L4OC 2I0SD 4FB1C 2OK6D
chains in the Genus database with same CATH superfamily
2IUPD 2AH1D 2IUVD 2MTAL 2AH0D 2J57K 4L1QC 2AGLD 2HJ4D 3SLEC 2HXCD 2AGYD 4L3GC 2AGXD 2HKRD 2IUQD 2OIZD 3ORVC 3PXSC 4FA9C 2OJYD 3C75L 4FA1C 4FAVC 3L4MC 3PXWC 3SXTC 2I0RD 1MG3B 2IURD 4O1QC 3RLMC 1MAEL 1MG2B 2IAAB 2I0TD 2GC4B 2J55L 2MADL 4K3IC 3RN0C 2GC7B 3RN1C 4FANC 4FA5C 3SVWC 2H3XB 2AGZD 1MDAL 2Q7QD 2H47B 4Y5RC 3RMZC 4L3HC 3SJLC 2HJBD 2BBKL 1MAFL 2HKMD 4FA4C 3SWSC 2J56L 2OK4D 2AGWD 3PXTC 3L4OC 2I0SD 4FB1C 2OK6D
chains in the Genus database with same CATH topology
2IUPD 2AH1D 2IUVD 2MTAL 2AH0D 2J57K 4L1QC 2AGLD 2HJ4D 3SLEC 2HXCD 2AGYD 4L3GC 2AGXD 2HKRD 2IUQD 2OIZD 3ORVC 3PXSC 4FA9C 2OJYD 3C75L 4FA1C 4FAVC 3L4MC 3PXWC 3SXTC 2I0RD 1MG3B 2IURD 4O1QC 3RLMC 1MAEL 1MG2B 2IAAB 2I0TD 2GC4B 2J55L 2MADL 4K3IC 3RN0C 2GC7B 3RN1C 4FANC 4FA5C 3SVWC 2H3XB 2AGZD 1MDAL 2Q7QD 2H47B 4Y5RC 3RMZC 4L3HC 3SJLC 2HJBD 2BBKL 1MAFL 2HKMD 4FA4C 3SWSC 2J56L 2OK4D 2AGWD 3PXTC 3L4OC 2I0SD 4FB1C 2OK6D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2IUP D;  2AH1 D;  2IUV D;  2MTA L;  2AH0 D;  2J57 K;  4L1Q C;  2AGL D;  2HJ4 D;  3SLE C;  2HXC D;  2AGY D;  4L3G C;  2AGX D;  2HKR D;  2IUQ D;  2OIZ D;  3ORV C;  3PXS C;  4FA9 C;  2OJY D;  3C75 L;  4FA1 C;  4FAV C;  3L4M C;  3PXW C;  3SXT C;  2I0R D;  1MG3 B;  2IUR D;  4O1Q C;  3RLM C;  1MAE L;  1MG2 B;  2IAA B;  2I0T D;  2GC4 B;  2J55 L;  2MAD L;  4K3I C;  3RN0 C;  2GC7 B;  3RN1 C;  4FAN C;  4FA5 C;  3SVW C;  2H3X B;  2AGZ D;  1MDA L;  2Q7Q D;  2H47 B;  4Y5R C;  3RMZ C;  4L3H C;  3SJL C;  2HJB D;  2BBK L;  1MAF L;  2HKM D;  4FA4 C;  3SWS C;  2J56 L;  2OK4 D;  2AGW D;  3PXT C;  3L4O C;  2I0S D;  4FB1 C;  2OK6 D; 
#chains in the Genus database with same CATH topology
 2IUP D;  2AH1 D;  2IUV D;  2MTA L;  2AH0 D;  2J57 K;  4L1Q C;  2AGL D;  2HJ4 D;  3SLE C;  2HXC D;  2AGY D;  4L3G C;  2AGX D;  2HKR D;  2IUQ D;  2OIZ D;  3ORV C;  3PXS C;  4FA9 C;  2OJY D;  3C75 L;  4FA1 C;  4FAV C;  3L4M C;  3PXW C;  3SXT C;  2I0R D;  1MG3 B;  2IUR D;  4O1Q C;  3RLM C;  1MAE L;  1MG2 B;  2IAA B;  2I0T D;  2GC4 B;  2J55 L;  2MAD L;  4K3I C;  3RN0 C;  2GC7 B;  3RN1 C;  4FAN C;  4FA5 C;  3SVW C;  2H3X B;  2AGZ D;  1MDA L;  2Q7Q D;  2H47 B;  4Y5R C;  3RMZ C;  4L3H C;  3SJL C;  2HJB D;  2BBK L;  1MAF L;  2HKM D;  4FA4 C;  3SWS C;  2J56 L;  2OK4 D;  2AGW D;  3PXT C;  3L4O C;  2I0S D;  4FB1 C;  2OK6 D; 
#chains in the Genus database with same CATH homology
 2IUP D;  2AH1 D;  2IUV D;  2MTA L;  2AH0 D;  2J57 K;  4L1Q C;  2AGL D;  2HJ4 D;  3SLE C;  2HXC D;  2AGY D;  4L3G C;  2AGX D;  2HKR D;  2IUQ D;  2OIZ D;  3ORV C;  3PXS C;  4FA9 C;  2OJY D;  3C75 L;  4FA1 C;  4FAV C;  3L4M C;  3PXW C;  3SXT C;  2I0R D;  1MG3 B;  2IUR D;  4O1Q C;  3RLM C;  1MAE L;  1MG2 B;  2IAA B;  2I0T D;  2GC4 B;  2J55 L;  2MAD L;  4K3I C;  3RN0 C;  2GC7 B;  3RN1 C;  4FAN C;  4FA5 C;  3SVW C;  2H3X B;  2AGZ D;  1MDA L;  2Q7Q D;  2H47 B;  4Y5R C;  3RMZ C;  4L3H C;  3SJL C;  2HJB D;  2BBK L;  1MAF L;  2HKM D;  4FA4 C;  3SWS C;  2J56 L;  2OK4 D;  2AGW D;  3PXT C;  3L4O C;  2I0S D;  4FB1 C;  2OK6 D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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