1AUZA

Solution structure of spoiiaa, a phosphorylatable component of the system that regulates transcription factor sigma-f of bacillus subtilis, nmr, 24 structures
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
116
structure length
116
Chain Sequence
SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHIVLNLEDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQALLTLGVAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription regulator
molecule keywords SPOIIAA
publication title Solution structure of SpoIIAA, a phosphorylatable component of the system that regulates transcription factor sigmaF of Bacillus subtilis.
pubmed doi rcsb
source organism Bacillus subtilis
total genus 19
structure length 116
sequence length 116
ec nomenclature
pdb deposition date 1997-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1auzA00
1BUZA 3ZXNA 2VY9A 3F43A 5EZBA 3AGEA 1TIDB 1T6RA 3IH8A 3OIRA 3IHAA 1TH8B 1TILB 3NY7A 4DGHA 2KA5A 1H4XA 3IF5A 1VC1A 3ZTBA 3IHBA 1H4YA 4QTPA 5EUZA 2KLNA 4DGFA 3OIZA 4XS5A 5EUUA 3MGLA 5EUSA 1SBOA 3IH9A 3LLOA 3T6OA 3AGDA 5EUWA 5EUXA 1H4ZA 4HYLA 1THNB 1AUZA 3LKLA
chains in the Genus database with same CATH superfamily
1FC9A 3DUPA 2B78A 4AEJA 3IH8A 3D03A 1TILB 3NY7A 3VSEA 4DGHA 2KA5A 3IF5A 3GVJA 1N6FA 3K50A 4DMGA 3EH7A 4XS5A 3MGLA 3GMFA 3T6OA 3AGDA 5EUXA 1THNB 3QDQA 3JU4A 3LKLA 1J7XA 1BUZA 3MOGA 4L1CA 3GHFA 3F43A 2ZOAA 3AGEA 1TIDB 3C0KA 3IHAA 1TH8B 2DXLA 1BPLA 3GK7A 1K32A 4HIZA 1WXXA 5EUZA 3DORA 1FC6A 2RRLA 5EUSA 5EUWA 1H4ZA 1AUZA 1FC7A 3ZXNA 3GVLA 2ZO9B 3V8VA 1T6RA 3OIRA 1V0FA 4GHNA 3DJAA 1H4XA 1VC1A 3GVKA 3IHBA 1H4YA 4QTPA 2KLNA 4L8KA 5EUUA 2OASA 3LLOA 3LDFA 1V0EA 4HYLA 3V97A 2VY9A 1FCFA 1N6DA 1N6EA 1WXWA 1HF2A 2AS0A 3ZTBA 3D3UA 4DGFA 2CWWA 4JC0A 2DXNA 3OIZA 4AE2A 1SBOA 3IH9A 5EZBA
chains in the Genus database with same CATH topology
1BUZA 3ZXNA 2VY9A 3F43A 5EZBA 3AGEA 1TIDB 1T6RA 3IH8A 3OIRA 3IHAA 1TH8B 1TILB 3NY7A 4DGHA 2KA5A 1H4XA 3IF5A 1VC1A 3ZTBA 3IHBA 1H4YA 4QTPA 5EUZA 2KLNA 4DGFA 3OIZA 4XS5A 5EUUA 3MGLA 5EUSA 1SBOA 3IH9A 3LLOA 3T6OA 3AGDA 5EUWA 5EUXA 1H4ZA 4HYLA 1THNB 1AUZA 3LKLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BUZ A;  3ZXN A;  2VY9 A;  3F43 A;  5EZB A;  3AGE A;  1TID B;  1T6R A;  3IH8 A;  3OIR A;  3IHA A;  1TH8 B;  1TIL B;  3NY7 A;  4DGH A;  2KA5 A;  1H4X A;  3IF5 A;  1VC1 A;  3ZTB A;  3IHB A;  1H4Y A;  4QTP A;  5EUZ A;  2KLN A;  4DGF A;  3OIZ A;  4XS5 A;  5EUU A;  3MGL A;  5EUS A;  1SBO A;  3IH9 A;  3LLO A;  3T6O A;  3AGD A;  5EUW A;  5EUX A;  1H4Z A;  4HYL A;  1THN B;  1AUZ A;  3LKL A; 
#chains in the Genus database with same CATH topology
 1FC9 A;  3DUP A;  2B78 A;  4AEJ A;  3IH8 A;  3D03 A;  1TIL B;  3NY7 A;  3VSE A;  4DGH A;  2KA5 A;  3IF5 A;  3GVJ A;  1N6F A;  3K50 A;  4DMG A;  3EH7 A;  4XS5 A;  3MGL A;  3GMF A;  3T6O A;  3AGD A;  5EUX A;  1THN B;  3QDQ A;  3JU4 A;  3LKL A;  1J7X A;  1BUZ A;  3MOG A;  4L1C A;  3GHF A;  3F43 A;  2ZOA A;  3AGE A;  1TID B;  3C0K A;  3IHA A;  1TH8 B;  2DXL A;  1BPL A;  3GK7 A;  1K32 A;  4HIZ A;  1WXX A;  5EUZ A;  3DOR A;  1FC6 A;  2RRL A;  5EUS A;  5EUW A;  1H4Z A;  1AUZ A;  1FC7 A;  3ZXN A;  3GVL A;  2ZO9 B;  3V8V A;  1T6R A;  3OIR A;  1V0F A;  4GHN A;  3DJA A;  1H4X A;  1VC1 A;  3GVK A;  3IHB A;  1H4Y A;  4QTP A;  2KLN A;  4L8K A;  5EUU A;  2OAS A;  3LLO A;  3LDF A;  1V0E A;  4HYL A;  3V97 A;  2VY9 A;  1FCF A;  1N6D A;  1N6E A;  1WXW A;  1HF2 A;  2AS0 A;  3ZTB A;  3D3U A;  4DGF A;  2CWW A;  4JC0 A;  2DXN A;  3OIZ A;  4AE2 A;  1SBO A;  3IH9 A;  5EZB A; 
#chains in the Genus database with same CATH homology
 1BUZ A;  3ZXN A;  2VY9 A;  3F43 A;  5EZB A;  3AGE A;  1TID B;  1T6R A;  3IH8 A;  3OIR A;  3IHA A;  1TH8 B;  1TIL B;  3NY7 A;  4DGH A;  2KA5 A;  1H4X A;  3IF5 A;  1VC1 A;  3ZTB A;  3IHB A;  1H4Y A;  4QTP A;  5EUZ A;  2KLN A;  4DGF A;  3OIZ A;  4XS5 A;  5EUU A;  3MGL A;  5EUS A;  1SBO A;  3IH9 A;  3LLO A;  3T6O A;  3AGD A;  5EUW A;  5EUX A;  1H4Z A;  4HYL A;  1THN B;  1AUZ A;  3LKL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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