1AUZA

Solution structure of spoiiaa, a phosphorylatable component of the system that regulates transcription factor sigma-f of bacillus subtilis, nmr, 24 structures
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
116
structure length
116
Chain Sequence
SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHIVLNLEDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQALLTLGVAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription regulator
source organism Bacillus subtilis
publication title Solution structure of SpoIIAA, a phosphorylatable component of the system that regulates transcription factor sigmaF of Bacillus subtilis.
pubmed doi rcsb
molecule keywords SPOIIAA
total genus 19
structure length 116
sequence length 116
ec nomenclature
pdb deposition date 1997-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1auzA00
2KA5A 4QTPA 3T6OA 1H4XA 3IHBA 3LLOA 5EZBA 1SBOA 1BUZA 3AGEA 1AUZA 1H4YA 3LKLA 3OIZA 1TH8B 3OIRA 3MGLA 4HYLA 1THNB 3AGDA 3IH8A 1VC1A 3ZXNA 1H4ZA 2VY9A 4DGHA 4DGFA 2KLNA 3NY7A 5EUUA 5EUSA 1TILB 3IF5A 3F43A 1TIDB 5EUXA 3IHAA 1T6RA 5EUWA 3IH9A 3ZTBA 5EUZA 4XS5A
chains in the Genus database with same CATH superfamily
1FC9A 1FC6A 3QDQA 1SBOA 1BUZA 3AGEA 1J7XA 2DXNA 1WXWA 1TH8B 2ZO9B 3VSEA 4DMGA 1FC7A 3EH7A 4AEJA 4L1CA 3NY7A 4L8KA 5EUUA 3GHFA 3DJAA 3IF5A 1TIDB 5EUXA 5EUWA 3DORA 3V8VA 2KA5A 4QTPA 5EZBA 1V0EA 1N6EA 1AUZA 3C0KA 3OIZA 3GVKA 1H4ZA 4DGHA 4DGFA 3JU4A 5EUSA 3IHAA 1T6RA 3V97A 1FCFA 1K32A 3T6OA 1H4XA 3LLOA 1HF2A 1H4YA 3LKLA 3D3UA 3GK7A 3OIRA 3MOGA 2OASA 2B78A 4HYLA 3GVLA 1THNB 1BPLA 3IH8A 3K50A 2AS0A 3LDFA 3ZXNA 2KLNA 3DUPA 1TILB 3F43A 3ZTBA 1WXXA 4XS5A 1N6DA 2DXLA 3IHBA 1V0FA 3D03A 1N6FA 3GVJA 4AE2A 2RRLA 3MGLA 4JC0A 3GMFA 3AGDA 1VC1A 2ZOAA 4HIZA 2VY9A 4GHNA 2CWWA 3IH9A 5EUZA
chains in the Genus database with same CATH topology
2KA5A 4QTPA 3T6OA 1H4XA 3IHBA 3LLOA 5EZBA 1SBOA 1BUZA 3AGEA 1AUZA 1H4YA 3LKLA 3OIZA 1TH8B 3OIRA 3MGLA 4HYLA 1THNB 3AGDA 3IH8A 1VC1A 3ZXNA 1H4ZA 2VY9A 4DGHA 4DGFA 2KLNA 3NY7A 5EUUA 5EUSA 1TILB 3IF5A 3F43A 1TIDB 5EUXA 3IHAA 1T6RA 5EUWA 3IH9A 3ZTBA 5EUZA 4XS5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KA5 A;  4QTP A;  3T6O A;  1H4X A;  3IHB A;  3LLO A;  5EZB A;  1SBO A;  1BUZ A;  3AGE A;  1AUZ A;  1H4Y A;  3LKL A;  3OIZ A;  1TH8 B;  3OIR A;  3MGL A;  4HYL A;  1THN B;  3AGD A;  3IH8 A;  1VC1 A;  3ZXN A;  1H4Z A;  2VY9 A;  4DGH A;  4DGF A;  2KLN A;  3NY7 A;  5EUU A;  5EUS A;  1TIL B;  3IF5 A;  3F43 A;  1TID B;  5EUX A;  3IHA A;  1T6R A;  5EUW A;  3IH9 A;  3ZTB A;  5EUZ A;  4XS5 A; 
#chains in the Genus database with same CATH topology
 1FC9 A;  1FC6 A;  3QDQ A;  1SBO A;  1BUZ A;  3AGE A;  1J7X A;  2DXN A;  1WXW A;  1TH8 B;  2ZO9 B;  3VSE A;  4DMG A;  1FC7 A;  3EH7 A;  4AEJ A;  4L1C A;  3NY7 A;  4L8K A;  5EUU A;  3GHF A;  3DJA A;  3IF5 A;  1TID B;  5EUX A;  5EUW A;  3DOR A;  3V8V A;  2KA5 A;  4QTP A;  5EZB A;  1V0E A;  1N6E A;  1AUZ A;  3C0K A;  3OIZ A;  3GVK A;  1H4Z A;  4DGH A;  4DGF A;  3JU4 A;  5EUS A;  3IHA A;  1T6R A;  3V97 A;  1FCF A;  1K32 A;  3T6O A;  1H4X A;  3LLO A;  1HF2 A;  1H4Y A;  3LKL A;  3D3U A;  3GK7 A;  3OIR A;  3MOG A;  2OAS A;  2B78 A;  4HYL A;  3GVL A;  1THN B;  1BPL A;  3IH8 A;  3K50 A;  2AS0 A;  3LDF A;  3ZXN A;  2KLN A;  3DUP A;  1TIL B;  3F43 A;  3ZTB A;  1WXX A;  4XS5 A;  1N6D A;  2DXL A;  3IHB A;  1V0F A;  3D03 A;  1N6F A;  3GVJ A;  4AE2 A;  2RRL A;  3MGL A;  4JC0 A;  3GMF A;  3AGD A;  1VC1 A;  2ZOA A;  4HIZ A;  2VY9 A;  4GHN A;  2CWW A;  3IH9 A;  5EUZ A; 
#chains in the Genus database with same CATH homology
 2KA5 A;  4QTP A;  3T6O A;  1H4X A;  3IHB A;  3LLO A;  5EZB A;  1SBO A;  1BUZ A;  3AGE A;  1AUZ A;  1H4Y A;  3LKL A;  3OIZ A;  1TH8 B;  3OIR A;  3MGL A;  4HYL A;  1THN B;  3AGD A;  3IH8 A;  1VC1 A;  3ZXN A;  1H4Z A;  2VY9 A;  4DGH A;  4DGF A;  2KLN A;  3NY7 A;  5EUU A;  5EUS A;  1TIL B;  3IF5 A;  3F43 A;  1TID B;  5EUX A;  3IHA A;  1T6R A;  5EUW A;  3IH9 A;  3ZTB A;  5EUZ A;  4XS5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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