1AUZA

Solution structure of spoiiaa, a phosphorylatable component of the system that regulates transcription factor sigma-f of bacillus subtilis, nmr, 24 structures
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
116
structure length
116
Chain Sequence
SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHIVLNLEDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQALLTLGVAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription regulator
molecule keywords SPOIIAA
publication title Solution structure of SpoIIAA, a phosphorylatable component of the system that regulates transcription factor sigmaF of Bacillus subtilis.
pubmed doi rcsb
source organism Bacillus subtilis
total genus 19
structure length 116
sequence length 116
ec nomenclature
pdb deposition date 1997-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1auzA00
4DGFA 1THNB 3ZXNA 3IH9A 3OIRA 1TIDB 4DGHA 5EUSA 2KA5A 2KLNA 3F43A 3T6OA 3ZTBA 5EZBA 3IHAA 4QTPA 3IH8A 5EUUA 3AGEA 1TH8B 3AGDA 1H4YA 5EUXA 1SBOA 3NY7A 4HYLA 1BUZA 1AUZA 3LKLA 1H4ZA 1TILB 2VY9A 3LLOA 3MGLA 1T6RA 5EUWA 1H4XA 3OIZA 3IHBA 1VC1A 5EUZA 4XS5A 3IF5A
chains in the Genus database with same CATH superfamily
3GVJA 3IH9A 3QDQA 3D03A 2KA5A 1HF2A 2DXLA 3IHAA 4QTPA 1J7XA 1N6FA 1BUZA 1N6DA 3GHFA 3DORA 1WXWA 4JC0A 1AUZA 3JU4A 4L1CA 3LDFA 1V0EA 3DUPA 4XS5A 2B78A 1V0FA 3IF5A 4DGFA 3OIRA 1TIDB 4DGHA 3GMFA 2KLNA 1BPLA 3T6OA 4AEJA 2CWWA 3AGEA 5EUXA 4L8KA 4HYLA 3LKLA 3K50A 3MGLA 1FC7A 5EUWA 1N6EA 5EUZA 3IHBA 3GVKA 5EUSA 4HIZA 3D3UA 3F43A 3V8VA 3ZTBA 5EZBA 1FCFA 2RRLA 3IH8A 5EUUA 1SBOA 3MOGA 2DXNA 1FC6A 1H4ZA 1WXXA 3LLOA 1K32A 1H4XA 2ZO9B 4DMGA 1VC1A 1THNB 3ZXNA 1FC9A 3GK7A 2ZOAA 3DJAA 4AE2A 3VSEA 3AGDA 1TH8B 1H4YA 3NY7A 3GVLA 4GHNA 1TILB 2OASA 2VY9A 3V97A 1T6RA 2AS0A 3EH7A 3OIZA 3C0KA
chains in the Genus database with same CATH topology
4DGFA 1THNB 3ZXNA 3IH9A 3OIRA 1TIDB 4DGHA 5EUSA 2KA5A 2KLNA 3F43A 3T6OA 3ZTBA 5EZBA 3IHAA 4QTPA 3IH8A 5EUUA 3AGEA 1TH8B 3AGDA 1H4YA 5EUXA 1SBOA 3NY7A 4HYLA 1BUZA 1AUZA 3LKLA 1H4ZA 1TILB 2VY9A 3LLOA 3MGLA 1T6RA 5EUWA 1H4XA 3OIZA 3IHBA 1VC1A 5EUZA 4XS5A 3IF5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4DGF A;  1THN B;  3ZXN A;  3IH9 A;  3OIR A;  1TID B;  4DGH A;  5EUS A;  2KA5 A;  2KLN A;  3F43 A;  3T6O A;  3ZTB A;  5EZB A;  3IHA A;  4QTP A;  3IH8 A;  5EUU A;  3AGE A;  1TH8 B;  3AGD A;  1H4Y A;  5EUX A;  1SBO A;  3NY7 A;  4HYL A;  1BUZ A;  1AUZ A;  3LKL A;  1H4Z A;  1TIL B;  2VY9 A;  3LLO A;  3MGL A;  1T6R A;  5EUW A;  1H4X A;  3OIZ A;  3IHB A;  1VC1 A;  5EUZ A;  4XS5 A;  3IF5 A; 
#chains in the Genus database with same CATH topology
 3GVJ A;  3IH9 A;  3QDQ A;  3D03 A;  2KA5 A;  1HF2 A;  2DXL A;  3IHA A;  4QTP A;  1J7X A;  1N6F A;  1BUZ A;  1N6D A;  3GHF A;  3DOR A;  1WXW A;  4JC0 A;  1AUZ A;  3JU4 A;  4L1C A;  3LDF A;  1V0E A;  3DUP A;  4XS5 A;  2B78 A;  1V0F A;  3IF5 A;  4DGF A;  3OIR A;  1TID B;  4DGH A;  3GMF A;  2KLN A;  1BPL A;  3T6O A;  4AEJ A;  2CWW A;  3AGE A;  5EUX A;  4L8K A;  4HYL A;  3LKL A;  3K50 A;  3MGL A;  1FC7 A;  5EUW A;  1N6E A;  5EUZ A;  3IHB A;  3GVK A;  5EUS A;  4HIZ A;  3D3U A;  3F43 A;  3V8V A;  3ZTB A;  5EZB A;  1FCF A;  2RRL A;  3IH8 A;  5EUU A;  1SBO A;  3MOG A;  2DXN A;  1FC6 A;  1H4Z A;  1WXX A;  3LLO A;  1K32 A;  1H4X A;  2ZO9 B;  4DMG A;  1VC1 A;  1THN B;  3ZXN A;  1FC9 A;  3GK7 A;  2ZOA A;  3DJA A;  4AE2 A;  3VSE A;  3AGD A;  1TH8 B;  1H4Y A;  3NY7 A;  3GVL A;  4GHN A;  1TIL B;  2OAS A;  2VY9 A;  3V97 A;  1T6R A;  2AS0 A;  3EH7 A;  3OIZ A;  3C0K A; 
#chains in the Genus database with same CATH homology
 4DGF A;  1THN B;  3ZXN A;  3IH9 A;  3OIR A;  1TID B;  4DGH A;  5EUS A;  2KA5 A;  2KLN A;  3F43 A;  3T6O A;  3ZTB A;  5EZB A;  3IHA A;  4QTP A;  3IH8 A;  5EUU A;  3AGE A;  1TH8 B;  3AGD A;  1H4Y A;  5EUX A;  1SBO A;  3NY7 A;  4HYL A;  1BUZ A;  1AUZ A;  3LKL A;  1H4Z A;  1TIL B;  2VY9 A;  3LLO A;  3MGL A;  1T6R A;  5EUW A;  1H4X A;  3OIZ A;  3IHB A;  1VC1 A;  5EUZ A;  4XS5 A;  3IF5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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