5EUWA

Rat prestin stas domain in complex with nitrate
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
143
structure length
129
Chain Sequence
SPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYNIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTSNRFFENPALKELLFHSIHDAVLGSQVREA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Prestin,Prestin
publication title The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 41
structure length 129
sequence length 143
ec nomenclature
pdb deposition date 2015-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 5euwA00
3T6OA 1BUZA 5EUSA 4DGFA 5EUZA 1H4ZA 3IH8A 4HYLA 4QTPA 3AGDA 3LLOA 1AUZA 1H4YA 3F43A 3IF5A 1TH8B 3NY7A 5EUUA 1T6RA 3OIRA 1THNB 1TIDB 1TILB 3LKLA 4XS5A 3IHAA 1SBOA 1VC1A 3ZTBA 3ZXNA 3OIZA 3MGLA 5EZBA 2KLNA 3IH9A 3IHBA 5EUXA 2KA5A 5EUWA 3AGEA 4DGHA 2VY9A 1H4XA
chains in the Genus database with same CATH superfamily
4AE2A 5EUZA 1H4YA 2ZO9B 3F43A 2ZOAA 3NY7A 3OIRA 1THNB 3MOGA 3LKLA 1V0EA 3DJAA 2OASA 3GHFA 1N6DA 5EUXA 3AGEA 3T6OA 3JU4A 1BUZA 2B78A 5EUSA 4GHNA 1FCFA 4DGFA 1H4ZA 3DORA 3IH8A 1AUZA 3LLOA 1BPLA 3V8VA 3GVJA 3GVKA 4DMGA 2RRLA 1TH8B 2AS0A 1T6RA 2CWWA 4JC0A 4L1CA 3C0KA 3VSEA 3D03A 1N6EA 2DXNA 1VC1A 3V97A 3OIZA 3MGLA 3IHBA 1N6FA 4DGHA 1WXXA 3GVLA 3AGDA 3D3UA 3EH7A 4AEJA 1V0FA 1FC6A 1WXWA 3IF5A 1K32A 1TIDB 1TILB 4XS5A 1SBOA 5EZBA 1J7XA 2KA5A 5EUWA 4L8KA 2VY9A 1H4XA 3K50A 4QTPA 4HYLA 3GMFA 2DXLA 3GK7A 1FC7A 5EUUA 3QDQA 3DUPA 4HIZA 3IHAA 3ZTBA 1FC9A 3ZXNA 1HF2A 2KLNA 3IH9A 3LDFA
chains in the Genus database with same CATH topology
3T6OA 1BUZA 5EUSA 4DGFA 5EUZA 1H4ZA 3IH8A 4HYLA 4QTPA 3AGDA 3LLOA 1AUZA 1H4YA 3F43A 3IF5A 1TH8B 3NY7A 5EUUA 1T6RA 3OIRA 1THNB 1TIDB 1TILB 3LKLA 4XS5A 3IHAA 1SBOA 1VC1A 3ZTBA 3ZXNA 3OIZA 3MGLA 5EZBA 2KLNA 3IH9A 3IHBA 5EUXA 2KA5A 5EUWA 3AGEA 4DGHA 2VY9A 1H4XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3T6O A;  1BUZ A;  5EUS A;  4DGF A;  5EUZ A;  1H4Z A;  3IH8 A;  4HYL A;  4QTP A;  3AGD A;  3LLO A;  1AUZ A;  1H4Y A;  3F43 A;  3IF5 A;  1TH8 B;  3NY7 A;  5EUU A;  1T6R A;  3OIR A;  1THN B;  1TID B;  1TIL B;  3LKL A;  4XS5 A;  3IHA A;  1SBO A;  1VC1 A;  3ZTB A;  3ZXN A;  3OIZ A;  3MGL A;  5EZB A;  2KLN A;  3IH9 A;  3IHB A;  5EUX A;  2KA5 A;  5EUW A;  3AGE A;  4DGH A;  2VY9 A;  1H4X A; 
#chains in the Genus database with same CATH topology
 4AE2 A;  5EUZ A;  1H4Y A;  2ZO9 B;  3F43 A;  2ZOA A;  3NY7 A;  3OIR A;  1THN B;  3MOG A;  3LKL A;  1V0E A;  3DJA A;  2OAS A;  3GHF A;  1N6D A;  5EUX A;  3AGE A;  3T6O A;  3JU4 A;  1BUZ A;  2B78 A;  5EUS A;  4GHN A;  1FCF A;  4DGF A;  1H4Z A;  3DOR A;  3IH8 A;  1AUZ A;  3LLO A;  1BPL A;  3V8V A;  3GVJ A;  3GVK A;  4DMG A;  2RRL A;  1TH8 B;  2AS0 A;  1T6R A;  2CWW A;  4JC0 A;  4L1C A;  3C0K A;  3VSE A;  3D03 A;  1N6E A;  2DXN A;  1VC1 A;  3V97 A;  3OIZ A;  3MGL A;  3IHB A;  1N6F A;  4DGH A;  1WXX A;  3GVL A;  3AGD A;  3D3U A;  3EH7 A;  4AEJ A;  1V0F A;  1FC6 A;  1WXW A;  3IF5 A;  1K32 A;  1TID B;  1TIL B;  4XS5 A;  1SBO A;  5EZB A;  1J7X A;  2KA5 A;  5EUW A;  4L8K A;  2VY9 A;  1H4X A;  3K50 A;  4QTP A;  4HYL A;  3GMF A;  2DXL A;  3GK7 A;  1FC7 A;  5EUU A;  3QDQ A;  3DUP A;  4HIZ A;  3IHA A;  3ZTB A;  1FC9 A;  3ZXN A;  1HF2 A;  2KLN A;  3IH9 A;  3LDF A; 
#chains in the Genus database with same CATH homology
 3T6O A;  1BUZ A;  5EUS A;  4DGF A;  5EUZ A;  1H4Z A;  3IH8 A;  4HYL A;  4QTP A;  3AGD A;  3LLO A;  1AUZ A;  1H4Y A;  3F43 A;  3IF5 A;  1TH8 B;  3NY7 A;  5EUU A;  1T6R A;  3OIR A;  1THN B;  1TID B;  1TIL B;  3LKL A;  4XS5 A;  3IHA A;  1SBO A;  1VC1 A;  3ZTB A;  3ZXN A;  3OIZ A;  3MGL A;  5EZB A;  2KLN A;  3IH9 A;  3IHB A;  5EUX A;  2KA5 A;  5EUW A;  3AGE A;  4DGH A;  2VY9 A;  1H4X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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