1H4XA

Structure of the bacillus cell fate determinant spoiiaa in the phosphorylated form
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
111
structure length
110
Chain Sequence
b'AFQLEMVTRETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSGVGLVLGRMRELEAVAGRTILLNPSPTMRKVFQFSGLGPWMMDATEEEAIDRVR'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ANTI-SIGMA F FACTOR ANTAGONIST
publication title Structure of the Bacillus Cell Fate Determinant Spoiiaa in Phosphorylated and Unphosphorylated Forms
pubmed doi rcsb
source organism Bacillus sphaericus
molecule tags Cell differentiation
total genus 42
structure length 110
sequence length 111
chains with identical sequence B
ec nomenclature
pdb deposition date 2001-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1h4xA00
1AUZA 1SBOA 5EZBA 1TIDB 3NY7A 3ZXNA 1BUZA 5EUWA 1H4XA 3LLOA 3IHBA 5EUXA 3MGLA 3T6OA 4QTPA 3LKLA 1TILB 3OIZA 3IH9A 4XS5A 1VC1A 1H4ZA 2KLNA 3IH8A 4HYLA 1T6RA 1TH8B 1THNB 3OIRA 4DGFA 3AGEA 3AGDA 3IHAA 1H4YA 2VY9A 5EUSA 5EUZA 4DGHA 3IF5A 3F43A 2KA5A 3ZTBA 5EUUA
chains in the Genus database with same CATH superfamily
3V97A 3NY7A 3D3UA 1BUZA 3DJAA 3IHBA 2OASA 3T6OA 3GHFA 1TILB 3IH9A 4L8KA 3IH8A 2ZO9B 3D03A 4HYLA 1T6RA 1N6DA 2DXNA 3OIRA 2B78A 1J7XA 1WXWA 2ZOAA 3GMFA 1V0FA 2DXLA 1HF2A 5EZBA 1TIDB 4L1CA 1H4XA 1N6FA 5EUXA 3MGLA 4QTPA 4DMGA 4HIZA 1THNB 2AS0A 3IHAA 1H4YA 1K32A 4DGHA 1FC9A 1FCFA 4AE2A 3GVJA 3ZXNA 3MOGA 3LLOA 3OIZA 1VC1A 4GHNA 1H4ZA 2KLNA 1BPLA 3GK7A 3V8VA 4DGFA 3GVLA 3AGEA 5EUSA 1V0EA 1WXXA 3ZTBA 5EUUA 1AUZA 1SBOA 3QDQA 3LDFA 5EUWA 2RRLA 3VSEA 4JC0A 1N6EA 3LKLA 4XS5A 3GVKA 2CWWA 4AEJA 3C0KA 1TH8B 1FC6A 3AGDA 3JU4A 3DUPA 2VY9A 5EUZA 3DORA 3IF5A 3F43A 1FC7A 2KA5A 3EH7A 3K50A
chains in the Genus database with same CATH topology
1AUZA 1SBOA 5EZBA 1TIDB 3NY7A 3ZXNA 1BUZA 5EUWA 1H4XA 3LLOA 3IHBA 5EUXA 3MGLA 3T6OA 4QTPA 3LKLA 1TILB 3OIZA 3IH9A 4XS5A 1VC1A 1H4ZA 2KLNA 3IH8A 4HYLA 1T6RA 1TH8B 1THNB 3OIRA 4DGFA 3AGEA 3AGDA 3IHAA 1H4YA 2VY9A 5EUSA 5EUZA 4DGHA 3IF5A 3F43A 2KA5A 3ZTBA 5EUUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AUZ A;  1SBO A;  5EZB A;  1TID B;  3NY7 A;  3ZXN A;  1BUZ A;  5EUW A;  1H4X A;  3LLO A;  3IHB A;  5EUX A;  3MGL A;  3T6O A;  4QTP A;  3LKL A;  1TIL B;  3OIZ A;  3IH9 A;  4XS5 A;  1VC1 A;  1H4Z A;  2KLN A;  3IH8 A;  4HYL A;  1T6R A;  1TH8 B;  1THN B;  3OIR A;  4DGF A;  3AGE A;  3AGD A;  3IHA A;  1H4Y A;  2VY9 A;  5EUS A;  5EUZ A;  4DGH A;  3IF5 A;  3F43 A;  2KA5 A;  3ZTB A;  5EUU A; 
#chains in the Genus database with same CATH topology
 3V97 A;  3NY7 A;  3D3U A;  1BUZ A;  3DJA A;  3IHB A;  2OAS A;  3T6O A;  3GHF A;  1TIL B;  3IH9 A;  4L8K A;  3IH8 A;  2ZO9 B;  3D03 A;  4HYL A;  1T6R A;  1N6D A;  2DXN A;  3OIR A;  2B78 A;  1J7X A;  1WXW A;  2ZOA A;  3GMF A;  1V0F A;  2DXL A;  1HF2 A;  5EZB A;  1TID B;  4L1C A;  1H4X A;  1N6F A;  5EUX A;  3MGL A;  4QTP A;  4DMG A;  4HIZ A;  1THN B;  2AS0 A;  3IHA A;  1H4Y A;  1K32 A;  4DGH A;  1FC9 A;  1FCF A;  4AE2 A;  3GVJ A;  3ZXN A;  3MOG A;  3LLO A;  3OIZ A;  1VC1 A;  4GHN A;  1H4Z A;  2KLN A;  1BPL A;  3GK7 A;  3V8V A;  4DGF A;  3GVL A;  3AGE A;  5EUS A;  1V0E A;  1WXX A;  3ZTB A;  5EUU A;  1AUZ A;  1SBO A;  3QDQ A;  3LDF A;  5EUW A;  2RRL A;  3VSE A;  4JC0 A;  1N6E A;  3LKL A;  4XS5 A;  3GVK A;  2CWW A;  4AEJ A;  3C0K A;  1TH8 B;  1FC6 A;  3AGD A;  3JU4 A;  3DUP A;  2VY9 A;  5EUZ A;  3DOR A;  3IF5 A;  3F43 A;  1FC7 A;  2KA5 A;  3EH7 A;  3K50 A; 
#chains in the Genus database with same CATH homology
 1AUZ A;  1SBO A;  5EZB A;  1TID B;  3NY7 A;  3ZXN A;  1BUZ A;  5EUW A;  1H4X A;  3LLO A;  3IHB A;  5EUX A;  3MGL A;  3T6O A;  4QTP A;  3LKL A;  1TIL B;  3OIZ A;  3IH9 A;  4XS5 A;  1VC1 A;  1H4Z A;  2KLN A;  3IH8 A;  4HYL A;  1T6R A;  1TH8 B;  1THN B;  3OIR A;  4DGF A;  3AGE A;  3AGD A;  3IHA A;  1H4Y A;  2VY9 A;  5EUS A;  5EUZ A;  4DGH A;  3IF5 A;  3F43 A;  2KA5 A;  3ZTB A;  5EUU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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