1H4XA

Structure of the bacillus cell fate determinant spoiiaa in the phosphorylated form
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
111
structure length
110
Chain Sequence
AFQLEMVTRETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSGVGLVLGRMRELEAVAGRTILLNPSPTMRKVFQFSGLGPWMMDATEEEAIDRVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell differentiation
molecule keywords ANTI-SIGMA F FACTOR ANTAGONIST
publication title Structure of the Bacillus Cell Fate Determinant Spoiiaa in Phosphorylated and Unphosphorylated Forms
pubmed doi rcsb
source organism Bacillus sphaericus
total genus 42
structure length 110
sequence length 111
chains with identical sequence B
ec nomenclature
pdb deposition date 2001-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1h4xA00
5EUSA 5EZBA 1H4ZA 1H4YA 3ZXNA 1TIDB 3MGLA 2KLNA 4DGHA 5EUZA 5EUWA 1H4XA 3T6OA 2KA5A 3LLOA 3ZTBA 1T6RA 1TH8B 1THNB 3IH9A 3IHAA 5EUUA 4DGFA 1VC1A 3IH8A 1SBOA 4HYLA 1TILB 2VY9A 3IHBA 3IF5A 3F43A 4QTPA 3AGDA 1BUZA 3NY7A 3OIRA 4XS5A 1AUZA 3LKLA 5EUXA 3AGEA 3OIZA
chains in the Genus database with same CATH superfamily
1H4ZA 3GVJA 1HF2A 4DMGA 1K32A 4DGHA 3GVLA 2DXNA 3T6OA 2KA5A 1N6DA 2AS0A 2ZOAA 3ZTBA 1T6RA 3LDFA 5EUUA 1N6FA 3V97A 4L1CA 3AGDA 1BUZA 3OIRA 2B78A 4AEJA 4HIZA 3OIZA 5EZBA 1TIDB 2RRLA 3MGLA 2KLNA 3C0KA 4L8KA 1WXWA 5EUWA 3V8VA 3MOGA 4JC0A 3LLOA 1J7XA 1N6EA 1TH8B 1THNB 1FCFA 3D03A 1VC1A 4HYLA 2DXLA 1FC9A 2VY9A 3IF5A 4QTPA 1AUZA 3DUPA 3LKLA 5EUXA 3QDQA 3EH7A 3GMFA 1H4YA 1V0FA 3GK7A 4GHNA 3GVKA 4DGFA 4AE2A 3NY7A 4XS5A 3GHFA 1FC6A 5EUSA 3JU4A 1FC7A 3ZXNA 3K50A 1WXXA 5EUZA 1H4XA 1BPLA 3DJAA 3IH9A 1V0EA 3IHAA 3IH8A 1SBOA 2ZO9B 1TILB 2CWWA 3IHBA 3DORA 3F43A 3D3UA 3AGEA 2OASA 3VSEA
chains in the Genus database with same CATH topology
5EUSA 5EZBA 1H4ZA 1H4YA 3ZXNA 1TIDB 3MGLA 2KLNA 4DGHA 5EUZA 5EUWA 1H4XA 3T6OA 2KA5A 3LLOA 3ZTBA 1T6RA 1TH8B 1THNB 3IH9A 3IHAA 5EUUA 4DGFA 1VC1A 3IH8A 1SBOA 4HYLA 1TILB 2VY9A 3IHBA 3IF5A 3F43A 4QTPA 3AGDA 1BUZA 3NY7A 3OIRA 4XS5A 1AUZA 3LKLA 5EUXA 3AGEA 3OIZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5EUS A;  5EZB A;  1H4Z A;  1H4Y A;  3ZXN A;  1TID B;  3MGL A;  2KLN A;  4DGH A;  5EUZ A;  5EUW A;  1H4X A;  3T6O A;  2KA5 A;  3LLO A;  3ZTB A;  1T6R A;  1TH8 B;  1THN B;  3IH9 A;  3IHA A;  5EUU A;  4DGF A;  1VC1 A;  3IH8 A;  1SBO A;  4HYL A;  1TIL B;  2VY9 A;  3IHB A;  3IF5 A;  3F43 A;  4QTP A;  3AGD A;  1BUZ A;  3NY7 A;  3OIR A;  4XS5 A;  1AUZ A;  3LKL A;  5EUX A;  3AGE A;  3OIZ A; 
#chains in the Genus database with same CATH topology
 1H4Z A;  3GVJ A;  1HF2 A;  4DMG A;  1K32 A;  4DGH A;  3GVL A;  2DXN A;  3T6O A;  2KA5 A;  1N6D A;  2AS0 A;  2ZOA A;  3ZTB A;  1T6R A;  3LDF A;  5EUU A;  1N6F A;  3V97 A;  4L1C A;  3AGD A;  1BUZ A;  3OIR A;  2B78 A;  4AEJ A;  4HIZ A;  3OIZ A;  5EZB A;  1TID B;  2RRL A;  3MGL A;  2KLN A;  3C0K A;  4L8K A;  1WXW A;  5EUW A;  3V8V A;  3MOG A;  4JC0 A;  3LLO A;  1J7X A;  1N6E A;  1TH8 B;  1THN B;  1FCF A;  3D03 A;  1VC1 A;  4HYL A;  2DXL A;  1FC9 A;  2VY9 A;  3IF5 A;  4QTP A;  1AUZ A;  3DUP A;  3LKL A;  5EUX A;  3QDQ A;  3EH7 A;  3GMF A;  1H4Y A;  1V0F A;  3GK7 A;  4GHN A;  3GVK A;  4DGF A;  4AE2 A;  3NY7 A;  4XS5 A;  3GHF A;  1FC6 A;  5EUS A;  3JU4 A;  1FC7 A;  3ZXN A;  3K50 A;  1WXX A;  5EUZ A;  1H4X A;  1BPL A;  3DJA A;  3IH9 A;  1V0E A;  3IHA A;  3IH8 A;  1SBO A;  2ZO9 B;  1TIL B;  2CWW A;  3IHB A;  3DOR A;  3F43 A;  3D3U A;  3AGE A;  2OAS A;  3VSE A; 
#chains in the Genus database with same CATH homology
 5EUS A;  5EZB A;  1H4Z A;  1H4Y A;  3ZXN A;  1TID B;  3MGL A;  2KLN A;  4DGH A;  5EUZ A;  5EUW A;  1H4X A;  3T6O A;  2KA5 A;  3LLO A;  3ZTB A;  1T6R A;  1TH8 B;  1THN B;  3IH9 A;  3IHA A;  5EUU A;  4DGF A;  1VC1 A;  3IH8 A;  1SBO A;  4HYL A;  1TIL B;  2VY9 A;  3IHB A;  3IF5 A;  3F43 A;  4QTP A;  3AGD A;  1BUZ A;  3NY7 A;  3OIR A;  4XS5 A;  1AUZ A;  3LKL A;  5EUX A;  3AGE A;  3OIZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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