1H4XA

Structure of the bacillus cell fate determinant spoiiaa in the phosphorylated form
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
111
structure length
110
Chain Sequence
AFQLEMVTRETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSGVGLVLGRMRELEAVAGRTILLNPSPTMRKVFQFSGLGPWMMDATEEEAIDRVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ANTI-SIGMA F FACTOR ANTAGONIST
publication title Structure of the Bacillus Cell Fate Determinant Spoiiaa in Phosphorylated and Unphosphorylated Forms
pubmed doi rcsb
source organism Bacillus sphaericus
molecule tags Cell differentiation
total genus 42
structure length 110
sequence length 111
chains with identical sequence B
ec nomenclature
pdb deposition date 2001-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1h4xA00
4QTPA 1H4ZA 4DGFA 5EUWA 5EUZA 4HYLA 3NY7A 3AGEA 3IH8A 3ZTBA 1TH8B 1T6RA 4XS5A 5EUUA 2KA5A 1BUZA 1H4XA 1H4YA 1THNB 3F43A 3IHBA 1VC1A 5EUSA 3IHAA 3MGLA 3LKLA 1TIDB 3OIZA 1SBOA 3LLOA 1TILB 5EUXA 3AGDA 3ZXNA 2KLNA 3OIRA 3IF5A 2VY9A 5EZBA 1AUZA 3IH9A 4DGHA 3T6OA
chains in the Genus database with same CATH superfamily
2OASA 3D3UA 2B78A 1H4ZA 3DJAA 3C0KA 1TH8B 1N6EA 1FC6A 1BUZA 1H4XA 1H4YA 1THNB 3F43A 1V0EA 1VC1A 5EUSA 3MGLA 1TIDB 3LLOA 3GVJA 5EUXA 3AGDA 3GVLA 4JC0A 2AS0A 1N6DA 4L1CA 1FC7A 3LDFA 4QTPA 4L8KA 4HIZA 4HYLA 1K32A 3ZTBA 3QDQA 3K50A 4XS5A 2ZO9B 1N6FA 1WXWA 3MOGA 3ZXNA 2KLNA 3OIRA 2CWWA 1WXXA 5EZBA 1V0FA 4DGHA 3JU4A 3DUPA 4AEJA 1BPLA 4AE2A 4DGFA 5EUWA 2ZOAA 2RRLA 3NY7A 1T6RA 2KA5A 3GVKA 3D03A 3V97A 3LKLA 1SBOA 3GK7A 3IF5A 3V8VA 3DORA 3EH7A 4DMGA 2DXNA 3GMFA 1J7XA 3GHFA 4GHNA 5EUZA 3AGEA 3IH8A 2DXLA 5EUUA 3IHBA 3IHAA 1HF2A 3OIZA 1TILB 2VY9A 1FC9A 1AUZA 3IH9A 3VSEA 3T6OA 1FCFA
chains in the Genus database with same CATH topology
4QTPA 1H4ZA 4DGFA 5EUWA 5EUZA 4HYLA 3NY7A 3AGEA 3IH8A 3ZTBA 1TH8B 1T6RA 4XS5A 5EUUA 2KA5A 1BUZA 1H4XA 1H4YA 1THNB 3F43A 3IHBA 1VC1A 5EUSA 3IHAA 3MGLA 3LKLA 1TIDB 3OIZA 1SBOA 3LLOA 1TILB 5EUXA 3AGDA 3ZXNA 2KLNA 3OIRA 3IF5A 2VY9A 5EZBA 1AUZA 3IH9A 4DGHA 3T6OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QTP A;  1H4Z A;  4DGF A;  5EUW A;  5EUZ A;  4HYL A;  3NY7 A;  3AGE A;  3IH8 A;  3ZTB A;  1TH8 B;  1T6R A;  4XS5 A;  5EUU A;  2KA5 A;  1BUZ A;  1H4X A;  1H4Y A;  1THN B;  3F43 A;  3IHB A;  1VC1 A;  5EUS A;  3IHA A;  3MGL A;  3LKL A;  1TID B;  3OIZ A;  1SBO A;  3LLO A;  1TIL B;  5EUX A;  3AGD A;  3ZXN A;  2KLN A;  3OIR A;  3IF5 A;  2VY9 A;  5EZB A;  1AUZ A;  3IH9 A;  4DGH A;  3T6O A; 
#chains in the Genus database with same CATH topology
 2OAS A;  3D3U A;  2B78 A;  1H4Z A;  3DJA A;  3C0K A;  1TH8 B;  1N6E A;  1FC6 A;  1BUZ A;  1H4X A;  1H4Y A;  1THN B;  3F43 A;  1V0E A;  1VC1 A;  5EUS A;  3MGL A;  1TID B;  3LLO A;  3GVJ A;  5EUX A;  3AGD A;  3GVL A;  4JC0 A;  2AS0 A;  1N6D A;  4L1C A;  1FC7 A;  3LDF A;  4QTP A;  4L8K A;  4HIZ A;  4HYL A;  1K32 A;  3ZTB A;  3QDQ A;  3K50 A;  4XS5 A;  2ZO9 B;  1N6F A;  1WXW A;  3MOG A;  3ZXN A;  2KLN A;  3OIR A;  2CWW A;  1WXX A;  5EZB A;  1V0F A;  4DGH A;  3JU4 A;  3DUP A;  4AEJ A;  1BPL A;  4AE2 A;  4DGF A;  5EUW A;  2ZOA A;  2RRL A;  3NY7 A;  1T6R A;  2KA5 A;  3GVK A;  3D03 A;  3V97 A;  3LKL A;  1SBO A;  3GK7 A;  3IF5 A;  3V8V A;  3DOR A;  3EH7 A;  4DMG A;  2DXN A;  3GMF A;  1J7X A;  3GHF A;  4GHN A;  5EUZ A;  3AGE A;  3IH8 A;  2DXL A;  5EUU A;  3IHB A;  3IHA A;  1HF2 A;  3OIZ A;  1TIL B;  2VY9 A;  1FC9 A;  1AUZ A;  3IH9 A;  3VSE A;  3T6O A;  1FCF A; 
#chains in the Genus database with same CATH homology
 4QTP A;  1H4Z A;  4DGF A;  5EUW A;  5EUZ A;  4HYL A;  3NY7 A;  3AGE A;  3IH8 A;  3ZTB A;  1TH8 B;  1T6R A;  4XS5 A;  5EUU A;  2KA5 A;  1BUZ A;  1H4X A;  1H4Y A;  1THN B;  3F43 A;  3IHB A;  1VC1 A;  5EUS A;  3IHA A;  3MGL A;  3LKL A;  1TID B;  3OIZ A;  1SBO A;  3LLO A;  1TIL B;  5EUX A;  3AGD A;  3ZXN A;  2KLN A;  3OIR A;  3IF5 A;  2VY9 A;  5EZB A;  1AUZ A;  3IH9 A;  4DGH A;  3T6O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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