2KLNA

Solution structure of stas domain of rv1739c from m. tuberculosis
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
124
structure length
124
Chain Sequence
MHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQDPGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Mycobacterium bovis
publication title Solution Structure of the Guanine Nucleotide-binding STAS Domain of SLC26-related SulP Protein Rv1739c from Mycobacterium tuberculosis.
pubmed doi rcsb
molecule keywords PROBABLE SULPHATE-TRANSPORT TRANSMEMBRANE PROTEIN, COG0659
total genus 34
structure length 124
sequence length 124
ec nomenclature
pdb deposition date 2009-07-06
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 2klnA00
3OIZA 5EUUA 1VC1A 1SBOA 5EZBA 4HYLA 3IHAA 3T6OA 5EUXA 4DGFA 3ZTBA 3OIRA 4XS5A 2KA5A 2VY9A 1H4XA 2KLNA 3F43A 3IH9A 3IH8A 4QTPA 4DGHA 3IF5A 3LLOA 3ZXNA 1THNB 5EUZA 5EUSA 3AGEA 3NY7A 5EUWA 1AUZA 1TH8B 1TIDB 3IHBA 3MGLA 1T6RA 1H4YA 1H4ZA 3AGDA 1TILB 1BUZA 3LKLA
chains in the Genus database with same CATH superfamily
3OIZA 5EUUA 1VC1A 1HF2A 3K50A 3IHAA 4L1CA 3LDFA 2VY9A 1WXWA 2CWWA 3IH8A 3V97A 4HIZA 3V8VA 4L8KA 3VSEA 2B78A 5EUSA 3NY7A 1TH8B 1TIDB 1V0EA 3GVKA 1K32A 3D03A 3AGDA 1FC9A 4AEJA 3GVLA 1V0FA 2RRLA 1SBOA 2ZOAA 4HYLA 4AE2A 3DUPA 5EUXA 3ZTBA 3OIRA 4XS5A 1FC6A 3F43A 3IH9A 4QTPA 3JU4A 3LLOA 3ZXNA 3GMFA 1FCFA 3AGEA 5EUWA 1BPLA 3QDQA 3MGLA 1N6DA 1T6RA 1H4YA 1TILB 3C0KA 3LKLA 3GK7A 1FC7A 1N6EA 2AS0A 1N6FA 2DXLA 1H4XA 3MOGA 4DGHA 3IF5A 5EUZA 3D3UA 1AUZA 2OASA 3IHBA 3EH7A 1H4ZA 1BUZA 2ZO9B 5EZBA 3T6OA 1WXXA 4DGFA 3GVJA 2KA5A 2KLNA 1THNB 3DJAA 3DORA 3GHFA 1J7XA 4GHNA 4DMGA 2DXNA 4JC0A
chains in the Genus database with same CATH topology
3OIZA 5EUUA 1VC1A 1SBOA 5EZBA 4HYLA 3IHAA 3T6OA 5EUXA 4DGFA 3ZTBA 3OIRA 4XS5A 2KA5A 2VY9A 1H4XA 2KLNA 3F43A 3IH9A 3IH8A 4QTPA 4DGHA 3IF5A 3LLOA 3ZXNA 1THNB 5EUZA 5EUSA 3AGEA 3NY7A 5EUWA 1AUZA 1TH8B 1TIDB 3IHBA 3MGLA 1T6RA 1H4YA 1H4ZA 3AGDA 1TILB 1BUZA 3LKLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OIZ A;  5EUU A;  1VC1 A;  1SBO A;  5EZB A;  4HYL A;  3IHA A;  3T6O A;  5EUX A;  4DGF A;  3ZTB A;  3OIR A;  4XS5 A;  2KA5 A;  2VY9 A;  1H4X A;  2KLN A;  3F43 A;  3IH9 A;  3IH8 A;  4QTP A;  4DGH A;  3IF5 A;  3LLO A;  3ZXN A;  1THN B;  5EUZ A;  5EUS A;  3AGE A;  3NY7 A;  5EUW A;  1AUZ A;  1TH8 B;  1TID B;  3IHB A;  3MGL A;  1T6R A;  1H4Y A;  1H4Z A;  3AGD A;  1TIL B;  1BUZ A;  3LKL A; 
#chains in the Genus database with same CATH topology
 3OIZ A;  5EUU A;  1VC1 A;  1HF2 A;  3K50 A;  3IHA A;  4L1C A;  3LDF A;  2VY9 A;  1WXW A;  2CWW A;  3IH8 A;  3V97 A;  4HIZ A;  3V8V A;  4L8K A;  3VSE A;  2B78 A;  5EUS A;  3NY7 A;  1TH8 B;  1TID B;  1V0E A;  3GVK A;  1K32 A;  3D03 A;  3AGD A;  1FC9 A;  4AEJ A;  3GVL A;  1V0F A;  2RRL A;  1SBO A;  2ZOA A;  4HYL A;  4AE2 A;  3DUP A;  5EUX A;  3ZTB A;  3OIR A;  4XS5 A;  1FC6 A;  3F43 A;  3IH9 A;  4QTP A;  3JU4 A;  3LLO A;  3ZXN A;  3GMF A;  1FCF A;  3AGE A;  5EUW A;  1BPL A;  3QDQ A;  3MGL A;  1N6D A;  1T6R A;  1H4Y A;  1TIL B;  3C0K A;  3LKL A;  3GK7 A;  1FC7 A;  1N6E A;  2AS0 A;  1N6F A;  2DXL A;  1H4X A;  3MOG A;  4DGH A;  3IF5 A;  5EUZ A;  3D3U A;  1AUZ A;  2OAS A;  3IHB A;  3EH7 A;  1H4Z A;  1BUZ A;  2ZO9 B;  5EZB A;  3T6O A;  1WXX A;  4DGF A;  3GVJ A;  2KA5 A;  2KLN A;  1THN B;  3DJA A;  3DOR A;  3GHF A;  1J7X A;  4GHN A;  4DMG A;  2DXN A;  4JC0 A; 
#chains in the Genus database with same CATH homology
 3OIZ A;  5EUU A;  1VC1 A;  1SBO A;  5EZB A;  4HYL A;  3IHA A;  3T6O A;  5EUX A;  4DGF A;  3ZTB A;  3OIR A;  4XS5 A;  2KA5 A;  2VY9 A;  1H4X A;  2KLN A;  3F43 A;  3IH9 A;  3IH8 A;  4QTP A;  4DGH A;  3IF5 A;  3LLO A;  3ZXN A;  1THN B;  5EUZ A;  5EUS A;  3AGE A;  3NY7 A;  5EUW A;  1AUZ A;  1TH8 B;  1TID B;  3IHB A;  3MGL A;  1T6R A;  1H4Y A;  1H4Z A;  3AGD A;  1TIL B;  1BUZ A;  3LKL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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