1AUZA

Solution structure of spoiiaa, a phosphorylatable component of the system that regulates transcription factor sigma-f of bacillus subtilis, nmr, 24 structures
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
116
structure length
116
Chain Sequence
SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHIVLNLEDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQALLTLGVAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription regulator
molecule keywords SPOIIAA
publication title Solution structure of SpoIIAA, a phosphorylatable component of the system that regulates transcription factor sigmaF of Bacillus subtilis.
pubmed doi rcsb
source organism Bacillus subtilis
total genus 19
structure length 116
sequence length 116
ec nomenclature
pdb deposition date 1997-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 1auzA00
1H4XA 3NY7A 3AGEA 1T6RA 5EUUA 3ZXNA 1TH8B 3IF5A 3F43A 5EUZA 4DGFA 3IHAA 4HYLA 1SBOA 3MGLA 5EUSA 5EUXA 2KLNA 4XS5A 3ZTBA 1TILB 2VY9A 2KA5A 1H4YA 3T6OA 3OIZA 3AGDA 3OIRA 1VC1A 3IH8A 3LKLA 4DGHA 1THNB 3IH9A 1AUZA 1TIDB 5EUWA 1H4ZA 3LLOA 4QTPA 3IHBA 5EZBA 1BUZA
chains in the Genus database with same CATH superfamily
1H4XA 3AGEA 3ZXNA 4JC0A 3DORA 5EUZA 1SBOA 3D03A 1WXWA 1H4YA 3GMFA 4GHNA 1V0EA 3LKLA 4DGHA 3IH9A 1AUZA 3LLOA 3IHBA 1K32A 2CWWA 3GVKA 1T6RA 2DXNA 2ZO9B 3K50A 5EUUA 3IF5A 4DGFA 1N6EA 1WXXA 3V8VA 3MGLA 5EUSA 3DUPA 1BPLA 2KLNA 3C0KA 3JU4A 2KA5A 1N6FA 1V0FA 3V97A 3AGDA 3OIRA 1VC1A 3GK7A 3D3UA 3QDQA 1J7XA 2ZOAA 1H4ZA 2AS0A 2RRLA 1BUZA 3NY7A 3DJAA 4AEJA 3VSEA 5EUXA 2OASA 2VY9A 3LDFA 1FC7A 3T6OA 3OIZA 1THNB 1HF2A 2DXLA 5EUWA 1FC9A 4QTPA 2B78A 5EZBA 3GHFA 1N6DA 3GVJA 3MOGA 4DMGA 4L8KA 1TH8B 3F43A 3IHAA 4HYLA 4HIZA 4XS5A 3ZTBA 1TILB 3IH8A 3GVLA 1TIDB 1FCFA 4L1CA 3EH7A 1FC6A 4AE2A
chains in the Genus database with same CATH topology
1H4XA 3NY7A 3AGEA 1T6RA 5EUUA 3ZXNA 1TH8B 3IF5A 3F43A 5EUZA 4DGFA 3IHAA 4HYLA 1SBOA 3MGLA 5EUSA 5EUXA 2KLNA 4XS5A 3ZTBA 1TILB 2VY9A 2KA5A 1H4YA 3T6OA 3OIZA 3AGDA 3OIRA 1VC1A 3IH8A 3LKLA 4DGHA 1THNB 3IH9A 1AUZA 1TIDB 5EUWA 1H4ZA 3LLOA 4QTPA 3IHBA 5EZBA 1BUZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1H4X A;  3NY7 A;  3AGE A;  1T6R A;  5EUU A;  3ZXN A;  1TH8 B;  3IF5 A;  3F43 A;  5EUZ A;  4DGF A;  3IHA A;  4HYL A;  1SBO A;  3MGL A;  5EUS A;  5EUX A;  2KLN A;  4XS5 A;  3ZTB A;  1TIL B;  2VY9 A;  2KA5 A;  1H4Y A;  3T6O A;  3OIZ A;  3AGD A;  3OIR A;  1VC1 A;  3IH8 A;  3LKL A;  4DGH A;  1THN B;  3IH9 A;  1AUZ A;  1TID B;  5EUW A;  1H4Z A;  3LLO A;  4QTP A;  3IHB A;  5EZB A;  1BUZ A; 
#chains in the Genus database with same CATH topology
 1H4X A;  3AGE A;  3ZXN A;  4JC0 A;  3DOR A;  5EUZ A;  1SBO A;  3D03 A;  1WXW A;  1H4Y A;  3GMF A;  4GHN A;  1V0E A;  3LKL A;  4DGH A;  3IH9 A;  1AUZ A;  3LLO A;  3IHB A;  1K32 A;  2CWW A;  3GVK A;  1T6R A;  2DXN A;  2ZO9 B;  3K50 A;  5EUU A;  3IF5 A;  4DGF A;  1N6E A;  1WXX A;  3V8V A;  3MGL A;  5EUS A;  3DUP A;  1BPL A;  2KLN A;  3C0K A;  3JU4 A;  2KA5 A;  1N6F A;  1V0F A;  3V97 A;  3AGD A;  3OIR A;  1VC1 A;  3GK7 A;  3D3U A;  3QDQ A;  1J7X A;  2ZOA A;  1H4Z A;  2AS0 A;  2RRL A;  1BUZ A;  3NY7 A;  3DJA A;  4AEJ A;  3VSE A;  5EUX A;  2OAS A;  2VY9 A;  3LDF A;  1FC7 A;  3T6O A;  3OIZ A;  1THN B;  1HF2 A;  2DXL A;  5EUW A;  1FC9 A;  4QTP A;  2B78 A;  5EZB A;  3GHF A;  1N6D A;  3GVJ A;  3MOG A;  4DMG A;  4L8K A;  1TH8 B;  3F43 A;  3IHA A;  4HYL A;  4HIZ A;  4XS5 A;  3ZTB A;  1TIL B;  3IH8 A;  3GVL A;  1TID B;  1FCF A;  4L1C A;  3EH7 A;  1FC6 A;  4AE2 A; 
#chains in the Genus database with same CATH homology
 1H4X A;  3NY7 A;  3AGE A;  1T6R A;  5EUU A;  3ZXN A;  1TH8 B;  3IF5 A;  3F43 A;  5EUZ A;  4DGF A;  3IHA A;  4HYL A;  1SBO A;  3MGL A;  5EUS A;  5EUX A;  2KLN A;  4XS5 A;  3ZTB A;  1TIL B;  2VY9 A;  2KA5 A;  1H4Y A;  3T6O A;  3OIZ A;  3AGD A;  3OIR A;  1VC1 A;  3IH8 A;  3LKL A;  4DGH A;  1THN B;  3IH9 A;  1AUZ A;  1TID B;  5EUW A;  1H4Z A;  3LLO A;  4QTP A;  3IHB A;  5EZB A;  1BUZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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