2RRLA

Solution structure of the c-terminal domain of the flik
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
169
structure length
169
Chain Sequence
HMASDDRATGPALTPLVVAAAATSAKVEVDSPPAPVTHGAAMPTLSSATAQPLPVASAPVLSAPLGSHEWQQTFSQQVMLFTRQGQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGIQLGQSSISSESFAGQQQSSSQQQSSR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The NMR structure of FliK, the trigger for the switch of substrate specificity in the flagellar type III secretion apparatus
pubmed doi rcsb
molecule tags Protein transport
source organism Salmonella typhimurium
molecule keywords Flagellar hook-length control protein
total genus 23
structure length 169
sequence length 169
ec nomenclature
pdb deposition date 2011-01-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02120 Flg_hook Flagellar hook-length control protein FliK
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.140 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA Transcription Regulator spoIIAA 2rrlA01
2RRLA
chains in the Genus database with same CATH superfamily
1V0FA 1H4ZA 1H4XA 1THNB 4L8KA 3OIZA 3MOGA 5EUSA 3GMFA 4DMGA 1FCFA 1FC9A 1TH8B 4L1CA 4XS5A 2RRLA 4AEJA 3VSEA 3DORA 1WXWA 5EUZA 1SBOA 3GVLA 5EUWA 4HIZA 1T6RA 3AGEA 2CWWA 1BPLA 1N6EA 1V0EA 1K32A 3V8VA 5EZBA 1TILB 2DXNA 3IHAA 3GVJA 3AGDA 3F43A 1BUZA 2AS0A 3T6OA 3D3UA 3ZXNA 1N6FA 4DGHA 3D03A 3C0KA 2ZO9B 4GHNA 2B78A 2KLNA 4HYLA 3K50A 3GVKA 3LLOA 5EUXA 1J7XA 3LKLA 3IH9A 3MGLA 3IHBA 1TIDB 1VC1A 1FC7A 4DGFA 2VY9A 4JC0A 3V97A 3GHFA 3JU4A 2KA5A 3IH8A 3LDFA 3IF5A 1AUZA 2ZOAA 3DJAA 1H4YA 1FC6A 4AE2A 3OIRA 3ZTBA 3EH7A 5EUUA 4QTPA 1WXXA 1N6DA 2OASA 2DXLA 3DUPA 3GK7A 3NY7A 1HF2A 3QDQA
chains in the Genus database with same CATH topology
3K50A 1K32A 4L8KA 2DXNA 1J7XA 3MOGA 3GMFA 2ZOAA 1FCFA 1FC9A 3DJAA 4L1CA 2RRLA 1FC6A 4AE2A 4AEJA 3DORA 1FC7A 1N6FA 4JC0A 3D03A 1N6DA 2ZO9B 2DXLA 4GHNA 3DUPA 1BPLA 1N6EA 3GHFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RRL A; 
#chains in the Genus database with same CATH topology
 1V0F A;  1H4Z A;  1H4X A;  1THN B;  4L8K A;  3OIZ A;  3MOG A;  5EUS A;  3GMF A;  4DMG A;  1FCF A;  1FC9 A;  1TH8 B;  4L1C A;  4XS5 A;  2RRL A;  4AEJ A;  3VSE A;  3DOR A;  1WXW A;  5EUZ A;  1SBO A;  3GVL A;  5EUW A;  4HIZ A;  1T6R A;  3AGE A;  2CWW A;  1BPL A;  1N6E A;  1V0E A;  1K32 A;  3V8V A;  5EZB A;  1TIL B;  2DXN A;  3IHA A;  3GVJ A;  3AGD A;  3F43 A;  1BUZ A;  2AS0 A;  3T6O A;  3D3U A;  3ZXN A;  1N6F A;  4DGH A;  3D03 A;  3C0K A;  2ZO9 B;  4GHN A;  2B78 A;  2KLN A;  4HYL A;  3K50 A;  3GVK A;  3LLO A;  5EUX A;  1J7X A;  3LKL A;  3IH9 A;  3MGL A;  3IHB A;  1TID B;  1VC1 A;  1FC7 A;  4DGF A;  2VY9 A;  4JC0 A;  3V97 A;  3GHF A;  3JU4 A;  2KA5 A;  3IH8 A;  3LDF A;  3IF5 A;  1AUZ A;  2ZOA A;  3DJA A;  1H4Y A;  1FC6 A;  4AE2 A;  3OIR A;  3ZTB A;  3EH7 A;  5EUU A;  4QTP A;  1WXX A;  1N6D A;  2OAS A;  2DXL A;  3DUP A;  3GK7 A;  3NY7 A;  1HF2 A;  3QDQ A; 
#chains in the Genus database with same CATH homology
 3K50 A;  1K32 A;  4L8K A;  2DXN A;  1J7X A;  3MOG A;  3GMF A;  2ZOA A;  1FCF A;  1FC9 A;  3DJA A;  4L1C A;  2RRL A;  1FC6 A;  4AE2 A;  4AEJ A;  3DOR A;  1FC7 A;  1N6F A;  4JC0 A;  3D03 A;  1N6D A;  2ZO9 B;  2DXL A;  4GHN A;  3DUP A;  1BPL A;  1N6E A;  3GHF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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