2RRLA

Solution structure of the c-terminal domain of the flik
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
169
structure length
169
Chain Sequence
HMASDDRATGPALTPLVVAAAATSAKVEVDSPPAPVTHGAAMPTLSSATAQPLPVASAPVLSAPLGSHEWQQTFSQQVMLFTRQGQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGIQLGQSSISSESFAGQQQSSSQQQSSR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The NMR structure of FliK, the trigger for the switch of substrate specificity in the flagellar type III secretion apparatus
pubmed doi rcsb
molecule tags Protein transport
source organism Salmonella typhimurium
molecule keywords Flagellar hook-length control protein
total genus 23
structure length 169
sequence length 169
ec nomenclature
pdb deposition date 2011-01-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02120 Flg_hook Flagellar hook-length control protein FliK
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.140 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA Transcription Regulator spoIIAA 2rrlA01
2RRLA
chains in the Genus database with same CATH superfamily
3K50A 1HF2A 1AUZA 3IHAA 2AS0A 3DORA 1N6EA 2RRLA 2B78A 2ZOAA 5EUZA 4HYLA 3DJAA 5EUUA 3ZTBA 4AEJA 2ZO9B 1BUZA 1FC7A 5EUSA 1FC6A 4QTPA 4DGFA 1H4XA 3T6OA 3GVJA 3IF5A 3GMFA 3OIZA 4DMGA 3IH9A 3GHFA 1N6FA 3QDQA 1V0EA 1K32A 3V8VA 3JU4A 4DGHA 4GHNA 3LKLA 1FC9A 3AGEA 3DUPA 1TIDB 4L8KA 5EUXA 2KLNA 3GVKA 2KA5A 3V97A 3OIRA 3ZXNA 1VC1A 3D03A 4XS5A 1WXXA 1V0FA 3F43A 1TH8B 1WXWA 3C0KA 5EUWA 3NY7A 1H4ZA 2DXLA 3EH7A 3IH8A 1SBOA 3LLOA 1N6DA 3GVLA 3D3UA 3MGLA 1BPLA 1TILB 3GK7A 4JC0A 1THNB 1T6RA 5EZBA 2VY9A 2OASA 4AE2A 1FCFA 2CWWA 2DXNA 3LDFA 3VSEA 1J7XA 3AGDA 4L1CA 3IHBA 3MOGA 1H4YA 4HIZA
chains in the Genus database with same CATH topology
3K50A 3GHFA 1N6FA 3DORA 1K32A 1N6EA 2RRLA 2ZOAA 4GHNA 4AE2A 3DJAA 1FC9A 3DUPA 4AEJA 2DXLA 2ZO9B 4L8KA 1FCFA 1FC7A 1FC6A 2DXNA 1N6DA 1J7XA 4L1CA 3MOGA 1BPLA 4JC0A 3GMFA 3D03A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RRL A; 
#chains in the Genus database with same CATH topology
 3K50 A;  1HF2 A;  1AUZ A;  3IHA A;  2AS0 A;  3DOR A;  1N6E A;  2RRL A;  2B78 A;  2ZOA A;  5EUZ A;  4HYL A;  3DJA A;  5EUU A;  3ZTB A;  4AEJ A;  2ZO9 B;  1BUZ A;  1FC7 A;  5EUS A;  1FC6 A;  4QTP A;  4DGF A;  1H4X A;  3T6O A;  3GVJ A;  3IF5 A;  3GMF A;  3OIZ A;  4DMG A;  3IH9 A;  3GHF A;  1N6F A;  3QDQ A;  1V0E A;  1K32 A;  3V8V A;  3JU4 A;  4DGH A;  4GHN A;  3LKL A;  1FC9 A;  3AGE A;  3DUP A;  1TID B;  4L8K A;  5EUX A;  2KLN A;  3GVK A;  2KA5 A;  3V97 A;  3OIR A;  3ZXN A;  1VC1 A;  3D03 A;  4XS5 A;  1WXX A;  1V0F A;  3F43 A;  1TH8 B;  1WXW A;  3C0K A;  5EUW A;  3NY7 A;  1H4Z A;  2DXL A;  3EH7 A;  3IH8 A;  1SBO A;  3LLO A;  1N6D A;  3GVL A;  3D3U A;  3MGL A;  1BPL A;  1TIL B;  3GK7 A;  4JC0 A;  1THN B;  1T6R A;  5EZB A;  2VY9 A;  2OAS A;  4AE2 A;  1FCF A;  2CWW A;  2DXN A;  3LDF A;  3VSE A;  1J7X A;  3AGD A;  4L1C A;  3IHB A;  3MOG A;  1H4Y A;  4HIZ A; 
#chains in the Genus database with same CATH homology
 3K50 A;  3GHF A;  1N6F A;  3DOR A;  1K32 A;  1N6E A;  2RRL A;  2ZOA A;  4GHN A;  4AE2 A;  3DJA A;  1FC9 A;  3DUP A;  4AEJ A;  2DXL A;  2ZO9 B;  4L8K A;  1FCF A;  1FC7 A;  1FC6 A;  2DXN A;  1N6D A;  1J7X A;  4L1C A;  3MOG A;  1BPL A;  4JC0 A;  3GMF A;  3D03 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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