3BZIA

Molecular and structural basis of polo-like kinase 1 substrate recognition: implications in centrosomal localization
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
223
structure length
223
Chain Sequence
DCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Homo sapiens
publication title Molecular and structural basis of polo-like kinase 1 substrate recognition: Implications in centrosomal localization.
pubmed doi rcsb
molecule keywords Serine/threonine-protein kinase PLK1
total genus 73
structure length 223
sequence length 223
ec nomenclature ec 2.7.11.21: Polo kinase.
pdb deposition date 2008-01-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00659 POLO_box POLO box duplicated region
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1120.30 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain POLO box domain 3bziA02
3.30.1120.30 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain POLO box domain 3bziA01
1Q4KA 3P2WA 4E9DA 5DNJA 3FVHA 3RQ7A 4YYPA 3BZIA 5DMSA 4WHHA 5DMVC 4J7BB 3P37A 3Q1IA 3HIKA 3C5LA 3P35A 4WHLA 4E9CA 4LKMA 1Q4OA 4WHKA 4XB0A 3P34A 2N19A 3HIHA 4LKLA 4RS6A 5J19A 4DFWA 5LHZA 4X9RA 2OJXA 4O56A 4HY2A 4H71A 4RCPA 4O6WA 1UMWA 4HCOA 2OGQA 4X9WA 4HABA 3P2ZA 4E67A 4H5XA 4X9VA 4O9WA 3P36A
chains in the Genus database with same CATH superfamily
5DNJA 4YYPA 4G7NA 2I9XA 4WHHA 4J7BB 2IA9A 1A87A 3FS3A 4WHLA 4E9CA 1Q4OA 1P49A 4NK7A 4RS6A 4DFWA 2VKZG 4CYSA 2OJXA 4O56A 1E2SP 4O6WA 1UMWA 4HABA 1E33P 1E2TA 1N2LA 5DAYA 4CXKA 3GYWA 4E9DA 3FVHA 3RQ7A 5DMSA 3P37A 3C5LA 4XB0A 1FSUA 3KDRA 3HIHA 5J19A 1HDHA 5LHZA 4X9RA 4HY2A 3P2ZA 4E67A 1N2KA 1F32A 2QZUA 3GYVA 1E1ZP 4N9JA 4FDIA 3BZIA 5DMVC 3HIKA 3P35A 4LKMA 2E50A 4CYRA 1F34B 3HFDA 4CXUA 3LXQA 4CXSA 4H71A 4RCPA 5AJ9A 2OGQA 4H5XA 3HMJG 1Q4KA 3P2WA 4FDJA 3ED4A 3Q1IA 4WHKA 4N7VA 3P34A 4NKBA 2N19A 4LKLA 3LM3A 4HCOA 2UV8G 4X9WA 2I9ZA 4N7ZA 1AUKA 1E3CP 4X9VA 4O9WA 3P36A
chains in the Genus database with same CATH topology
1Q4KA 3P2WA 4E9DA 5DNJA 3FVHA 3RQ7A 4YYPA 3BZIA 5DMSA 4WHHA 5DMVC 4J7BB 3P37A 3Q1IA 3HIKA 3C5LA 3P35A 4WHLA 4E9CA 4LKMA 1Q4OA 4WHKA 4XB0A 3P34A 2N19A 3HIHA 4LKLA 4RS6A 5J19A 4DFWA 5LHZA 4X9RA 2OJXA 4O56A 4HY2A 4H71A 4RCPA 4O6WA 1UMWA 4HCOA 2OGQA 4X9WA 4HABA 3P2ZA 4E67A 4H5XA 4X9VA 4O9WA 3P36A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Q4K A;  3P2W A;  4E9D A;  5DNJ A;  3FVH A;  3RQ7 A;  4YYP A;  3BZI A;  5DMS A;  4WHH A;  5DMV C;  4J7B B;  3P37 A;  3Q1I A;  3HIK A;  3C5L A;  3P35 A;  4WHL A;  4E9C A;  4LKM A;  1Q4O A;  4WHK A;  4XB0 A;  3P34 A;  2N19 A;  3HIH A;  4LKL A;  4RS6 A;  5J19 A;  4DFW A;  5LHZ A;  4X9R A;  2OJX A;  4O56 A;  4HY2 A;  4H71 A;  4RCP A;  4O6W A;  1UMW A;  4HCO A;  2OGQ A;  4X9W A;  4HAB A;  3P2Z A;  4E67 A;  4H5X A;  4X9V A;  4O9W A;  3P36 A; 
#chains in the Genus database with same CATH topology
 5DNJ A;  4YYP A;  4G7N A;  2I9X A;  4WHH A;  4J7B B;  2IA9 A;  1A87 A;  3FS3 A;  4WHL A;  4E9C A;  1Q4O A;  1P49 A;  4NK7 A;  4RS6 A;  4DFW A;  2VKZ G;  4CYS A;  2OJX A;  4O56 A;  1E2S P;  4O6W A;  1UMW A;  4HAB A;  1E33 P;  1E2T A;  1N2L A;  5DAY A;  4CXK A;  3GYW A;  4E9D A;  3FVH A;  3RQ7 A;  5DMS A;  3P37 A;  3C5L A;  4XB0 A;  1FSU A;  3KDR A;  3HIH A;  5J19 A;  1HDH A;  5LHZ A;  4X9R A;  4HY2 A;  3P2Z A;  4E67 A;  1N2K A;  1F32 A;  2QZU A;  3GYV A;  1E1Z P;  4N9J A;  4FDI A;  3BZI A;  5DMV C;  3HIK A;  3P35 A;  4LKM A;  2E50 A;  4CYR A;  1F34 B;  3HFD A;  4CXU A;  3LXQ A;  4CXS A;  4H71 A;  4RCP A;  5AJ9 A;  2OGQ A;  4H5X A;  3HMJ G;  1Q4K A;  3P2W A;  4FDJ A;  3ED4 A;  3Q1I A;  4WHK A;  4N7V A;  3P34 A;  4NKB A;  2N19 A;  4LKL A;  3LM3 A;  4HCO A;  2UV8 G;  4X9W A;  2I9Z A;  4N7Z A;  1AUK A;  1E3C P;  4X9V A;  4O9W A;  3P36 A; 
#chains in the Genus database with same CATH homology
 1Q4K A;  3P2W A;  4E9D A;  5DNJ A;  3FVH A;  3RQ7 A;  4YYP A;  3BZI A;  5DMS A;  4WHH A;  5DMV C;  4J7B B;  3P37 A;  3Q1I A;  3HIK A;  3C5L A;  3P35 A;  4WHL A;  4E9C A;  4LKM A;  1Q4O A;  4WHK A;  4XB0 A;  3P34 A;  2N19 A;  3HIH A;  4LKL A;  4RS6 A;  5J19 A;  4DFW A;  5LHZ A;  4X9R A;  2OJX A;  4O56 A;  4HY2 A;  4H71 A;  4RCP A;  4O6W A;  1UMW A;  4HCO A;  2OGQ A;  4X9W A;  4HAB A;  3P2Z A;  4E67 A;  4H5X A;  4X9V A;  4O9W A;  3P36 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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