3P2ZA

Polo-like kinase i polo-box domain in complex with plhspta phosphopeptide from pbip1
Total Genus 67
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
227
structure length
210
Chain Sequence
SPEFDCHLSDMLQQLHSVEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPDELARLPYLRTWFRTRSAIILHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
source organism Homo sapiens
publication title From crystal packing to molecular recognition: prediction and discovery of a binding site on the surface of polo-like kinase 1
pubmed doi rcsb
molecule keywords Serine/threonine-protein kinase PLK1
total genus 67
structure length 210
sequence length 227
ec nomenclature ec 2.7.11.21: Polo kinase.
pdb deposition date 2010-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00659 POLO_box POLO box duplicated region
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1120.30 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain POLO box domain 3p2zA02
3.30.1120.30 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain POLO box domain 3p2zA01
4J7BB 4H71A 4X9WA 3RQ7A 3P34A 1Q4KA 4E67A 3HIKA 4RS6A 4RCPA 3FVHA 4O9WA 4DFWA 1UMWA 4O56A 4LKMA 4X9VA 2OJXA 4O6WA 4E9DA 4WHKA 5DMVC 3P36A 2OGQA 3Q1IA 3P2ZA 4H5XA 4HCOA 3P37A 5DNJA 5LHZA 5DMSA 4LKLA 4HABA 4X9RA 5J19A 4XB0A 4E9CA 3BZIA 3P2WA 3C5LA 4HY2A 2N19A 3P35A 3HIHA 4YYPA 4WHHA 4WHLA 1Q4OA
chains in the Genus database with same CATH superfamily
4X9WA 3KDRA 1E33P 4E9DA 3P36A 2OGQA 3Q1IA 4HCOA 1F32A 5DNJA 3HFDA 4X9RA 4XB0A 3BZIA 4YYPA 3ED4A 1Q4KA 1AUKA 4N9JA 4CXUA 4RCPA 3FVHA 4O9WA 4O56A 4WHKA 5DMVC 3FS3A 3P2ZA 1E2TA 1E1ZP 3P37A 1P49A 3GYWA 2VKZG 5DMSA 5LHZA 4NK7A 5J19A 1E2SP 4E9CA 2E50A 3LM3A 2N19A 3P35A 4G7NA 4J7BB 1E3CP 2QZUA 3RQ7A 2I9XA 3HIKA 4FDIA 4DFWA 1UMWA 4LKMA 4X9VA 4O6WA 1N2LA 3LXQA 5AJ9A 3HMJG 2UV8G 4CYRA 4LKLA 3C5LA 4WHHA 4WHLA 3GYVA 1N2KA 1Q4OA 1F34B 4H71A 1HDHA 3P34A 4CXKA 4E67A 4RS6A 1A87A 2IA9A 4N7ZA 2OJXA 4NKBA 4N7VA 4H5XA 5DAYA 4CXSA 2I9ZA 4HABA 4CYSA 3P2WA 4HY2A 3HIHA 4FDJA 1FSUA
chains in the Genus database with same CATH topology
4J7BB 4H71A 4X9WA 3RQ7A 3P34A 1Q4KA 4E67A 3HIKA 4RS6A 4RCPA 3FVHA 4O9WA 4DFWA 1UMWA 4O56A 4LKMA 4X9VA 2OJXA 4O6WA 4E9DA 4WHKA 5DMVC 3P36A 2OGQA 3Q1IA 3P2ZA 4H5XA 4HCOA 3P37A 5DNJA 5LHZA 5DMSA 4LKLA 4HABA 4X9RA 5J19A 4XB0A 4E9CA 3BZIA 3P2WA 3C5LA 4HY2A 2N19A 3P35A 3HIHA 4YYPA 4WHHA 4WHLA 1Q4OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4J7B B;  4H71 A;  4X9W A;  3RQ7 A;  3P34 A;  1Q4K A;  4E67 A;  3HIK A;  4RS6 A;  4RCP A;  3FVH A;  4O9W A;  4DFW A;  1UMW A;  4O56 A;  4LKM A;  4X9V A;  2OJX A;  4O6W A;  4E9D A;  4WHK A;  5DMV C;  3P36 A;  2OGQ A;  3Q1I A;  3P2Z A;  4H5X A;  4HCO A;  3P37 A;  5DNJ A;  5LHZ A;  5DMS A;  4LKL A;  4HAB A;  4X9R A;  5J19 A;  4XB0 A;  4E9C A;  3BZI A;  3P2W A;  3C5L A;  4HY2 A;  2N19 A;  3P35 A;  3HIH A;  4YYP A;  4WHH A;  4WHL A;  1Q4O A; 
#chains in the Genus database with same CATH topology
 4X9W A;  3KDR A;  1E33 P;  4E9D A;  3P36 A;  2OGQ A;  3Q1I A;  4HCO A;  1F32 A;  5DNJ A;  3HFD A;  4X9R A;  4XB0 A;  3BZI A;  4YYP A;  3ED4 A;  1Q4K A;  1AUK A;  4N9J A;  4CXU A;  4RCP A;  3FVH A;  4O9W A;  4O56 A;  4WHK A;  5DMV C;  3FS3 A;  3P2Z A;  1E2T A;  1E1Z P;  3P37 A;  1P49 A;  3GYW A;  2VKZ G;  5DMS A;  5LHZ A;  4NK7 A;  5J19 A;  1E2S P;  4E9C A;  2E50 A;  3LM3 A;  2N19 A;  3P35 A;  4G7N A;  4J7B B;  1E3C P;  2QZU A;  3RQ7 A;  2I9X A;  3HIK A;  4FDI A;  4DFW A;  1UMW A;  4LKM A;  4X9V A;  4O6W A;  1N2L A;  3LXQ A;  5AJ9 A;  3HMJ G;  2UV8 G;  4CYR A;  4LKL A;  3C5L A;  4WHH A;  4WHL A;  3GYV A;  1N2K A;  1Q4O A;  1F34 B;  4H71 A;  1HDH A;  3P34 A;  4CXK A;  4E67 A;  4RS6 A;  1A87 A;  2IA9 A;  4N7Z A;  2OJX A;  4NKB A;  4N7V A;  4H5X A;  5DAY A;  4CXS A;  2I9Z A;  4HAB A;  4CYS A;  3P2W A;  4HY2 A;  3HIH A;  4FDJ A;  1FSU A; 
#chains in the Genus database with same CATH homology
 4J7B B;  4H71 A;  4X9W A;  3RQ7 A;  3P34 A;  1Q4K A;  4E67 A;  3HIK A;  4RS6 A;  4RCP A;  3FVH A;  4O9W A;  4DFW A;  1UMW A;  4O56 A;  4LKM A;  4X9V A;  2OJX A;  4O6W A;  4E9D A;  4WHK A;  5DMV C;  3P36 A;  2OGQ A;  3Q1I A;  3P2Z A;  4H5X A;  4HCO A;  3P37 A;  5DNJ A;  5LHZ A;  5DMS A;  4LKL A;  4HAB A;  4X9R A;  5J19 A;  4XB0 A;  4E9C A;  3BZI A;  3P2W A;  3C5L A;  4HY2 A;  2N19 A;  3P35 A;  3HIH A;  4YYP A;  4WHH A;  4WHL A;  1Q4O A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...